RNA–Protein interactions for RNA: ENST00000562083.1

CCP110-205, Transcript of centriolar coiled-coil protein 110, humanhuman

TSL 3

Gene CCP110, Length 595 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCP110-205ENST00000562083 HMG20AQ9NP66 347 aa9.65□□□□□ -0.86
CCP110-205ENST00000562083 CMC2Q9NRP2 79 aa9.65□□□□□ -0.86
CCP110-205ENST00000562083 KIF25Q9UIL4 384 aa9.65□□□□□ -0.86
CCP110-205ENST00000562083 A3GALT2U3KPV4 340 aa9.65□□□□□ -0.86
CCP110-205ENST00000562083 IGKV1-12A0A0C4DH73 117 aa9.64□□□□□ -0.87
CCP110-205ENST00000562083 MSGN1A6NI15 193 aa9.64□□□□□ -0.87
CCP110-205ENST00000562083 RIIAD1A6NNX1 92 aa9.64□□□□□ -0.87
CCP110-205ENST00000562083 HSPB6O14558 160 aa9.64□□□□□ -0.87
CCP110-205ENST00000562083 MAGEB4O15481 346 aaPredicted RBP9.64□□□□□ -0.87
CCP110-205ENST00000562083 GASTP01350 101 aa9.64□□□□□ -0.87
CCP110-205ENST00000562083 IGKV1D-12P01611 117 aa9.64□□□□□ -0.87
CCP110-205ENST00000562083 CSN2P05814 226 aa9.64□□□□□ -0.87
CCP110-205ENST00000562083 ZNF44P15621 663 aa9.64□□□□□ -0.87
CCP110-205ENST00000562083 RRM2P31350 389 aa9.64□□□□□ -0.87
CCP110-205ENST00000562083 MMDQ15546 238 aa9.64□□□□□ -0.87
CCP110-205ENST00000562083 LRRC36Q1X8D7 754 aa9.64□□□□□ -0.87
CCP110-205ENST00000562083 SPIN3Q5JUX0 258 aa9.64□□□□□ -0.87
CCP110-205ENST00000562083 RPL13AP3Q6NVV1 102 aa9.64□□□□□ -0.87
CCP110-205ENST00000562083 PLEKHG7Q6ZR37 379 aa9.64□□□□□ -0.87
CCP110-205ENST00000562083 RASSF6Q6ZTQ3 369 aa9.64□□□□□ -0.87
CCP110-205ENST00000562083 IQCF1Q8N6M8 205 aa9.64□□□□□ -0.87
CCP110-205ENST00000562083 RP9Q8TA86 221 aaKnown RBP9.64□□□□□ -0.87
CCP110-205ENST00000562083 UBALD1Q8TB05 177 aa9.64□□□□□ -0.87
CCP110-205ENST00000562083 MRGPRDQ8TDS7 321 aa9.64□□□□□ -0.87
CCP110-205ENST00000562083 KCTD12Q96CX2 325 aaKnown RBP9.64□□□□□ -0.87
CCP110-205ENST00000562083 ANKRD60Q9BZ19 345 aa9.64□□□□□ -0.87
CCP110-205ENST00000562083 INTS9Q9NV88 658 aaKnown RBP9.64□□□□□ -0.87
CCP110-205ENST00000562083 MRM2Q9UI43 246 aaKnown RBP9.64□□□□□ -0.87
CCP110-205ENST00000562083 GTF2A1LQ9UNN4 478 aa9.64□□□□□ -0.87
CCP110-205ENST00000562083 FOXA2Q9Y261 457 aaPredicted RBP9.64□□□□□ -0.87
CCP110-205ENST00000562083 MYCBP2O75592 4640 aa9.63□□□□□ -0.87
CCP110-205ENST00000562083 ANKRD34BA5PLL1 514 aa9.63□□□□□ -0.87
CCP110-205ENST00000562083 SLC31A2O15432 143 aa9.63□□□□□ -0.87
CCP110-205ENST00000562083 HLA-DRB1P01911 266 aa9.63□□□□□ -0.87
CCP110-205ENST00000562083 SEMG1P04279 462 aa9.63□□□□□ -0.87
CCP110-205ENST00000562083 EGR2P11161 476 aaPredicted RBP9.63□□□□□ -0.87
CCP110-205ENST00000562083 ZNF3P17036 446 aa9.63□□□□□ -0.87
CCP110-205ENST00000562083 IFNGR2P38484 337 aa9.63□□□□□ -0.87
CCP110-205ENST00000562083 SAMD4BQ5PRF9 694 aaKnown RBP9.63□□□□□ -0.87
CCP110-205ENST00000562083 Q6ZSR3 168 aa9.63□□□□□ -0.87
CCP110-205ENST00000562083 Q8IYB0 196 aa9.63□□□□□ -0.87
CCP110-205ENST00000562083 OR2T33Q8NG76 320 aa9.63□□□□□ -0.87
CCP110-205ENST00000562083 PLEKHA1Q9HB21 404 aa9.63□□□□□ -0.87
CCP110-205ENST00000562083 GID8Q9NWU2 228 aa9.63□□□□□ -0.87
CCP110-205ENST00000562083 SLC23A1Q9UHI7 598 aa9.63□□□□□ -0.87
CCP110-205ENST00000562083 LAMP5Q9UJQ1 280 aa9.63□□□□□ -0.87
CCP110-205ENST00000562083 MEIKINA0A087WXM9 373 aa9.62□□□□□ -0.87
CCP110-205ENST00000562083 IFNGP01579 166 aa9.62□□□□□ -0.87
CCP110-205ENST00000562083 FUT6P51993 359 aa9.62□□□□□ -0.87
CCP110-205ENST00000562083 SMIM11AP58511 58 aa9.62□□□□□ -0.87
CCP110-205ENST00000562083 CD300EQ496F6 205 aaPredicted RBP9.62□□□□□ -0.87
CCP110-205ENST00000562083 ELMOD2Q8IZ81 293 aa9.62□□□□□ -0.87
CCP110-205ENST00000562083 BBS1Q8NFJ9 593 aa9.62□□□□□ -0.87
CCP110-205ENST00000562083 OR51T1Q8NGJ9 327 aa9.62□□□□□ -0.87
CCP110-205ENST00000562083 STON2Q8WXE9 905 aa9.62□□□□□ -0.87
CCP110-205ENST00000562083 ANP32BQ92688 251 aaKnown RBP9.62□□□□□ -0.87
CCP110-205ENST00000562083 RFT1Q96AA3 541 aa9.62□□□□□ -0.87
CCP110-205ENST00000562083 TLCD1Q96CP7 247 aa9.62□□□□□ -0.87
CCP110-205ENST00000562083 RCN3Q96D15 328 aa9.62□□□□□ -0.87
CCP110-205ENST00000562083 COMMD4Q9H0A8 199 aa9.62□□□□□ -0.87
CCP110-205ENST00000562083 NDE1Q9NXR1 346 aa9.62□□□□□ -0.87
CCP110-205ENST00000562083 BBIP1A8MTZ0 92 aa9.61□□□□□ -0.87
CCP110-205ENST00000562083 TPPP2P59282 170 aa9.61□□□□□ -0.87
CCP110-205ENST00000562083 ZNF45Q02386 682 aa9.61□□□□□ -0.87
CCP110-205ENST00000562083 SF3A3Q12874 501 aaKnown RBP eCLIP9.61□□□□□ -0.87
CCP110-205ENST00000562083 PPP1R8Q12972 351 aaKnown RBP9.61□□□□□ -0.87
CCP110-205ENST00000562083 TRIM25Q14258 630 aaKnown RBP9.61□□□□□ -0.87
CCP110-205ENST00000562083 CDK5R1Q15078 307 aa9.61□□□□□ -0.87
CCP110-205ENST00000562083 ODF4Q2M2E3 257 aa9.61□□□□□ -0.87
CCP110-205ENST00000562083 WFDC3Q8IUB2 231 aa9.61□□□□□ -0.87
CCP110-205ENST00000562083 ZNF565Q8N9K5 539 aa9.61□□□□□ -0.87
CCP110-205ENST00000562083 BORCS8Q96FH0 119 aa9.61□□□□□ -0.87
CCP110-205ENST00000562083 SLC2A8Q9NY64 477 aa9.61□□□□□ -0.87
CCP110-205ENST00000562083 BAIAP2Q9UQB8 552 aa9.61□□□□□ -0.87
CCP110-205ENST00000562083 NUBP2Q9Y5Y2 271 aa9.61□□□□□ -0.87
CCP110-205ENST00000562083 SELENOKQ9Y6D0 94 aa9.61□□□□□ -0.87
CCP110-205ENST00000562083 IGHV3-43A0A0B4J1X8 118 aa9.6□□□□□ -0.87
CCP110-205ENST00000562083 IGKV1-9A0A0C4DH69 117 aa9.6□□□□□ -0.87
CCP110-205ENST00000562083 LOC110117498-PIK3R3F6TDL0 507 aa9.6□□□□□ -0.87
CCP110-205ENST00000562083 ARPC1BO15143 372 aaKnown RBP9.6□□□□□ -0.87
CCP110-205ENST00000562083 NDUFB8O95169 186 aa9.6□□□□□ -0.87
CCP110-205ENST00000562083 TRBV12-3P01733 135 aa9.6□□□□□ -0.87
CCP110-205ENST00000562083 MRPL3P09001 348 aaKnown RBP9.6□□□□□ -0.87
CCP110-205ENST00000562083 IGHV3-43DP0DP04 118 aa9.6□□□□□ -0.87
CCP110-205ENST00000562083 ZP3P21754 424 aa9.6□□□□□ -0.87
CCP110-205ENST00000562083 CRIP2P52943 208 aaPredicted RBP9.6□□□□□ -0.87
CCP110-205ENST00000562083 ACTBP60709 375 aa9.6□□□□□ -0.87
CCP110-205ENST00000562083 DEFA5Q01523 94 aa9.6□□□□□ -0.87
CCP110-205ENST00000562083 BCL2L15Q5TBC7 163 aa9.6□□□□□ -0.87
CCP110-205ENST00000562083 DEGS2Q6QHC5 323 aa9.6□□□□□ -0.87
CCP110-205ENST00000562083 ZNF679Q8IYX0 411 aa9.6□□□□□ -0.87
CCP110-205ENST00000562083 LINC00311Q8N616 119 aa9.6□□□□□ -0.87
CCP110-205ENST00000562083 PLPPR1Q8TBJ4 325 aa9.6□□□□□ -0.87
CCP110-205ENST00000562083 UTP4Q969X6 686 aaKnown RBP9.6□□□□□ -0.87
CCP110-205ENST00000562083 RNF183Q96D59 192 aa9.6□□□□□ -0.87
CCP110-205ENST00000562083 APOL4Q9BPW4 351 aa9.6□□□□□ -0.87
CCP110-205ENST00000562083 FAM103A1Q9BTL3 118 aaKnown RBP9.6□□□□□ -0.87
CCP110-205ENST00000562083 GGTLC1Q9BX51 225 aa9.6□□□□□ -0.87
CCP110-205ENST00000562083 MROQ9BYG7 248 aa9.6□□□□□ -0.87
CCP110-205ENST00000562083 RANGRFQ9HD47 186 aaPredicted RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms