RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 XKRY2A2RUG3 117 aa2.56□□□□□ -2
HERC1-215ENST00000561436 RBMY1BA6NDE4 496 aaKnown RBP2.56□□□□□ -2
HERC1-215ENST00000561436 RBMY1EA6NEQ0 496 aaKnown RBP2.56□□□□□ -2
HERC1-215ENST00000561436 TRIM64CA6NLI5 447 aa2.56□□□□□ -2
HERC1-215ENST00000561436 A8MT66 165 aa2.56□□□□□ -2
HERC1-215ENST00000561436 H3BSA7 217 aa2.56□□□□□ -2
HERC1-215ENST00000561436 RAD51CO43502 376 aa2.56□□□□□ -2
HERC1-215ENST00000561436 TRAF3IP2O43734 574 aaPredicted RBP2.56□□□□□ -2
HERC1-215ENST00000561436 OR2T1O43869 369 aa2.56□□□□□ -2
HERC1-215ENST00000561436 ERLIN1O75477 346 aa2.56□□□□□ -2
HERC1-215ENST00000561436 BANF1O75531 89 aa2.56□□□□□ -2
HERC1-215ENST00000561436 RP2O75695 350 aa2.56□□□□□ -2
HERC1-215ENST00000561436 OR7A10O76100 309 aa2.56□□□□□ -2
HERC1-215ENST00000561436 MPZL1O95297 269 aa2.56□□□□□ -2
HERC1-215ENST00000561436 H6PDO95479 791 aa2.56□□□□□ -2
HERC1-215ENST00000561436 INSP01308 110 aa2.56□□□□□ -2
HERC1-215ENST00000561436 HMGN2P05204 90 aaKnown RBP2.56□□□□□ -2
HERC1-215ENST00000561436 CRYBA1P05813 215 aa2.56□□□□□ -2
HERC1-215ENST00000561436 FGF4P08620 206 aa2.56□□□□□ -2
HERC1-215ENST00000561436 ADRA2AP08913 450 aa2.56□□□□□ -2
HERC1-215ENST00000561436 KRTAP1-4P0C5Y4 121 aa2.56□□□□□ -2
HERC1-215ENST00000561436 RBMY1DP0C7P1 496 aaKnown RBP2.56□□□□□ -2
HERC1-215ENST00000561436 CECR9P0C854 216 aa2.56□□□□□ -2
HERC1-215ENST00000561436 RBMY1A1P0DJD3 496 aaKnown RBP2.56□□□□□ -2
HERC1-215ENST00000561436 ZNF35P13682 527 aa2.56□□□□□ -2
HERC1-215ENST00000561436 ELK1P19419 428 aa2.56□□□□□ -2
HERC1-215ENST00000561436 PRPS1L1P21108 318 aa2.56□□□□□ -2
HERC1-215ENST00000561436 SERPINB5P36952 375 aa2.56□□□□□ -2
HERC1-215ENST00000561436 VHLP40337 213 aa2.56□□□□□ -2
HERC1-215ENST00000561436 DNAJB13P59910 316 aa2.56□□□□□ -2
HERC1-215ENST00000561436 IMPG1Q17R60 797 aa2.56□□□□□ -2
HERC1-215ENST00000561436 TRMT5Q32P41 509 aaKnown RBP2.56□□□□□ -2
HERC1-215ENST00000561436 TMEM155Q4W5P6 130 aa2.56□□□□□ -2
HERC1-215ENST00000561436 C2orf83Q53S99 150 aa2.56□□□□□ -2
HERC1-215ENST00000561436 KPRPQ5T749 579 aaPredicted RBP2.56□□□□□ -2
HERC1-215ENST00000561436 TSPO2Q5TGU0 170 aa2.56□□□□□ -2
HERC1-215ENST00000561436 UQCC3Q6UW78 93 aa2.56□□□□□ -2
HERC1-215ENST00000561436 LRRN1Q6UXK5 716 aa2.56□□□□□ -2
HERC1-215ENST00000561436 CASP12Q6UXS9 341 aa2.56□□□□□ -2
HERC1-215ENST00000561436 CDH26Q8IXH8 852 aa2.56□□□□□ -2
HERC1-215ENST00000561436 LRRC34Q8IZ02 419 aa2.56□□□□□ -2
HERC1-215ENST00000561436 C6orf223Q8N319 242 aa2.56□□□□□ -2
HERC1-215ENST00000561436 TPRX1Q8N7U7 411 aa2.56□□□□□ -2
HERC1-215ENST00000561436 OR10G9Q8NGN4 311 aa2.56□□□□□ -2
HERC1-215ENST00000561436 OR6X1Q8NH79 312 aa2.56□□□□□ -2
HERC1-215ENST00000561436 ZNF563Q8TA94 476 aa2.56□□□□□ -2
HERC1-215ENST00000561436 KCNG3Q8TAE7 436 aa2.56□□□□□ -2
HERC1-215ENST00000561436 ARPC1AQ92747 370 aa2.56□□□□□ -2
HERC1-215ENST00000561436 RASD2Q96D21 266 aa2.56□□□□□ -2
HERC1-215ENST00000561436 OXGR1Q96P68 337 aa2.56□□□□□ -2
HERC1-215ENST00000561436 OR8B4Q96RC9 309 aa2.56□□□□□ -2
HERC1-215ENST00000561436 SDF2Q99470 211 aa2.56□□□□□ -2
HERC1-215ENST00000561436 SORT1Q99523 831 aa2.56□□□□□ -2
HERC1-215ENST00000561436 RHOXF2Q9BQY4 288 aa2.56□□□□□ -2
HERC1-215ENST00000561436 TMEM246Q9BRR3 403 aa2.56□□□□□ -2
HERC1-215ENST00000561436 TAPBPLQ9BX59 468 aa2.56□□□□□ -2
HERC1-215ENST00000561436 OR11A1Q9GZK7 315 aa2.56□□□□□ -2
HERC1-215ENST00000561436 ARMC7Q9H6L4 198 aa2.56□□□□□ -2
HERC1-215ENST00000561436 RNF167Q9H6Y7 350 aa2.56□□□□□ -2
HERC1-215ENST00000561436 ANKRA2Q9H9E1 313 aa2.56□□□□□ -2
HERC1-215ENST00000561436 C12orf10Q9HB07 376 aa2.56□□□□□ -2
HERC1-215ENST00000561436 MMP26Q9NRE1 261 aa2.56□□□□□ -2
HERC1-215ENST00000561436 PSMC3IPQ9P2W1 217 aaPredicted RBP2.56□□□□□ -2
HERC1-215ENST00000561436 ZNF225Q9UK10 706 aa2.56□□□□□ -2
HERC1-215ENST00000561436 SNX24Q9Y343 169 aa2.56□□□□□ -2
HERC1-215ENST00000561436 SAR1BQ9Y6B6 198 aa2.56□□□□□ -2
HERC1-215ENST00000561436 DCHS2Q6V1P9 2916 aa2.56□□□□□ -2
HERC1-215ENST00000561436 IGLV3-9A0A075B6K5 115 aa2.55□□□□□ -2
HERC1-215ENST00000561436 IGHV2OR16-5A0A0B4J2B6 119 aa2.55□□□□□ -2
HERC1-215ENST00000561436 IGHV1-69-2A0A0G2JMI3 117 aa2.55□□□□□ -2
HERC1-215ENST00000561436 CLPSL1A2RUU4 121 aa2.55□□□□□ -2
HERC1-215ENST00000561436 C17orf51A8MQB3 221 aa2.55□□□□□ -2
HERC1-215ENST00000561436 ZNF99A8MXY4 864 aaPredicted RBP2.55□□□□□ -2
HERC1-215ENST00000561436 CENPBD1B2RD01 187 aa2.55□□□□□ -2
HERC1-215ENST00000561436 CLDN25C9JDP6 229 aa2.55□□□□□ -2
HERC1-215ENST00000561436 DLGAP1O14490 977 aa2.55□□□□□ -2
HERC1-215ENST00000561436 LSM1O15116 133 aaKnown RBP2.55□□□□□ -2
HERC1-215ENST00000561436 CLPXO76031 633 aa2.55□□□□□ -2
HERC1-215ENST00000561436 LY6HO94772 140 aa2.55□□□□□ -2
HERC1-215ENST00000561436 UBL3O95164 117 aa2.55□□□□□ -2
HERC1-215ENST00000561436 SVILO95425 2214 aa2.55□□□□□ -2
HERC1-215ENST00000561436 SNAP29O95721 258 aa2.55□□□□□ -2
HERC1-215ENST00000561436 TMEM50AO95807 157 aa2.55□□□□□ -2
HERC1-215ENST00000561436 IGHV2-5P01817 119 aa2.55□□□□□ -2
HERC1-215ENST00000561436 IGHMP01871 453 aa2.55□□□□□ -2
HERC1-215ENST00000561436 SNRPAP09012 282 aaKnown RBP2.55□□□□□ -2
HERC1-215ENST00000561436 TFPTP0C1Z6 253 aa2.55□□□□□ -2
HERC1-215ENST00000561436 ZNF250P15622 560 aa2.55□□□□□ -2
HERC1-215ENST00000561436 PTNP21246 168 aa2.55□□□□□ -2
HERC1-215ENST00000561436 OR2B6P58173 313 aa2.55□□□□□ -2
HERC1-215ENST00000561436 COPZ1P61923 177 aa2.55□□□□□ -2
HERC1-215ENST00000561436 GNB2P62879 340 aa2.55□□□□□ -2
HERC1-215ENST00000561436 BST1Q10588 318 aa2.55□□□□□ -2
HERC1-215ENST00000561436 BAMBIQ13145 260 aa2.55□□□□□ -2
HERC1-215ENST00000561436 TOMM34Q15785 309 aaPredicted RBP2.55□□□□□ -2
HERC1-215ENST00000561436 CCDC153Q494R4 210 aa2.55□□□□□ -2
HERC1-215ENST00000561436 LRRC10Q5BKY1 277 aa2.55□□□□□ -2
HERC1-215ENST00000561436 COA6Q5JTJ3 125 aaKnown RBP2.55□□□□□ -2
HERC1-215ENST00000561436 ANXA8L1Q5VT79 327 aa2.55□□□□□ -2
HERC1-215ENST00000561436 RNASEKQ6P5S7 137 aaKnown RBP2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms