RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 FAAP20Q6NZ36 180 aa8.62□□□□□ -1.03
USP3-219ENST00000561326 TRAT1Q6PIZ9 186 aa8.62□□□□□ -1.03
USP3-219ENST00000561326 ZNF788Q6ZQV5 615 aa8.62□□□□□ -1.03
USP3-219ENST00000561326 IDO2Q6ZQW0 420 aa8.62□□□□□ -1.03
USP3-219ENST00000561326 C17orf107Q6ZR85 190 aa8.62□□□□□ -1.03
USP3-219ENST00000561326 OVCH2Q7RTZ1 564 aa8.62□□□□□ -1.03
USP3-219ENST00000561326 GAPTQ8N292 157 aa8.62□□□□□ -1.03
USP3-219ENST00000561326 ZNF565Q8N9K5 539 aa8.62□□□□□ -1.03
USP3-219ENST00000561326 OR4D10Q8NGI6 311 aa8.62□□□□□ -1.03
USP3-219ENST00000561326 MRPL30Q8TCC3 161 aaKnown RBP8.62□□□□□ -1.03
USP3-219ENST00000561326 MAFIPQ8WZ33 124 aa8.62□□□□□ -1.03
USP3-219ENST00000561326 RAB1CQ92928 201 aa8.62□□□□□ -1.03
USP3-219ENST00000561326 GINS4Q9BRT9 223 aa8.62□□□□□ -1.03
USP3-219ENST00000561326 MMP28Q9H239 520 aa8.62□□□□□ -1.03
USP3-219ENST00000561326 NCOR1P1Q9H4R4 102 aa8.62□□□□□ -1.03
USP3-219ENST00000561326 RAB9BQ9NP90 201 aa8.62□□□□□ -1.03
USP3-219ENST00000561326 NUDT15Q9NV35 164 aa8.62□□□□□ -1.03
USP3-219ENST00000561326 ING3Q9NXR8 418 aa8.62□□□□□ -1.03
USP3-219ENST00000561326 RALYQ9UKM9 306 aaKnown RBP8.62□□□□□ -1.03
USP3-219ENST00000561326 SMG1Q96Q15 3661 aaKnown RBP8.62□□□□□ -1.03
USP3-219ENST00000561326 ARID1AO14497 2285 aa8.61□□□□□ -1.03
USP3-219ENST00000561326 hCG_2014768A0A024R1R8 64 aa8.61□□□□□ -1.03
USP3-219ENST00000561326 MEIKINA0A087WXM9 373 aa8.61□□□□□ -1.03
USP3-219ENST00000561326 A0A1W2PPR1 153 aa8.61□□□□□ -1.03
USP3-219ENST00000561326 SDCBPO00560 298 aaPredicted RBP8.61□□□□□ -1.03
USP3-219ENST00000561326 SIGLEC5O15389 551 aa8.61□□□□□ -1.03
USP3-219ENST00000561326 TMPRSS2O15393 492 aa8.61□□□□□ -1.03
USP3-219ENST00000561326 FABP7O15540 132 aa8.61□□□□□ -1.03
USP3-219ENST00000561326 SSX4O60224 188 aa8.61□□□□□ -1.03
USP3-219ENST00000561326 ZNF737O75373 536 aa8.61□□□□□ -1.03
USP3-219ENST00000561326 ZNF205O95201 554 aa8.61□□□□□ -1.03
USP3-219ENST00000561326 RLN1P04808 185 aa8.61□□□□□ -1.03
USP3-219ENST00000561326 ZNF735P0CB33 412 aa8.61□□□□□ -1.03
USP3-219ENST00000561326 GSTT2P0CG29 244 aa8.61□□□□□ -1.03
USP3-219ENST00000561326 EFNA4P52798 201 aa8.61□□□□□ -1.03
USP3-219ENST00000561326 TMEM33P57088 247 aa8.61□□□□□ -1.03
USP3-219ENST00000561326 C6orf183Q5T699 404 aa8.61□□□□□ -1.03
USP3-219ENST00000561326 ZNF880Q6PDB4 577 aa8.61□□□□□ -1.03
USP3-219ENST00000561326 DHRS11Q6UWP2 260 aa8.61□□□□□ -1.03
USP3-219ENST00000561326 ZNF554Q86TJ5 538 aa8.61□□□□□ -1.03
USP3-219ENST00000561326 TGIF2LYQ8IUE0 185 aa8.61□□□□□ -1.03
USP3-219ENST00000561326 MUC20Q8N307 709 aaPredicted RBP8.61□□□□□ -1.03
USP3-219ENST00000561326 ZNRF1Q8ND25 227 aa8.61□□□□□ -1.03
USP3-219ENST00000561326 OR4A4PQ8NGN8 299 aa8.61□□□□□ -1.03
USP3-219ENST00000561326 PLPPR1Q8TBJ4 325 aa8.61□□□□□ -1.03
USP3-219ENST00000561326 CCDC107Q8WV48 283 aa8.61□□□□□ -1.03
USP3-219ENST00000561326 LURAP1Q96LR2 239 aa8.61□□□□□ -1.03
USP3-219ENST00000561326 CCL13Q99616 98 aa8.61□□□□□ -1.03
USP3-219ENST00000561326 SHARPINQ9H0F6 387 aa8.61□□□□□ -1.03
USP3-219ENST00000561326 PLEKHF2Q9H8W4 249 aa8.61□□□□□ -1.03
USP3-219ENST00000561326 ZNF222Q9UK12 451 aa8.61□□□□□ -1.03
USP3-219ENST00000561326 PCDHB10Q9UN67 800 aa8.61□□□□□ -1.03
USP3-219ENST00000561326 DCHS2Q6V1P9 2916 aa8.61□□□□□ -1.03
USP3-219ENST00000561326 UTP20O75691 2785 aaKnown RBP8.6□□□□□ -1.03
USP3-219ENST00000561326 IGKV1D-8A0A087WSZ0 117 aa8.6□□□□□ -1.03
USP3-219ENST00000561326 A0A1B0GVG6 124 aa8.6□□□□□ -1.03
USP3-219ENST00000561326 A1L4Q6 167 aa8.6□□□□□ -1.03
USP3-219ENST00000561326 ADAM20O43506 726 aa8.6□□□□□ -1.03
USP3-219ENST00000561326 NDUFB3O43676 98 aa8.6□□□□□ -1.03
USP3-219ENST00000561326 PRAF2O60831 178 aa8.6□□□□□ -1.03
USP3-219ENST00000561326 PEX14O75381 377 aa8.6□□□□□ -1.03
USP3-219ENST00000561326 DIRAS3O95661 229 aa8.6□□□□□ -1.03
USP3-219ENST00000561326 CLDN1O95832 211 aa8.6□□□□□ -1.03
USP3-219ENST00000561326 RCC1P18754 421 aaPredicted RBP8.6□□□□□ -1.03
USP3-219ENST00000561326 ERP29P30040 261 aaKnown RBP8.6□□□□□ -1.03
USP3-219ENST00000561326 HLA-DRB3P79483 266 aa8.6□□□□□ -1.03
USP3-219ENST00000561326 HOXA4Q00056 320 aaPredicted RBP8.6□□□□□ -1.03
USP3-219ENST00000561326 EDDM3AQ14507 147 aa8.6□□□□□ -1.03
USP3-219ENST00000561326 LRRC10Q5BKY1 277 aa8.6□□□□□ -1.03
USP3-219ENST00000561326 ZDHHC22Q8N966 263 aa8.6□□□□□ -1.03
USP3-219ENST00000561326 TMEM185AQ8NFB2 350 aa8.6□□□□□ -1.03
USP3-219ENST00000561326 OR10J5Q8NHC4 309 aa8.6□□□□□ -1.03
USP3-219ENST00000561326 GIMAP1Q8WWP7 306 aa8.6□□□□□ -1.03
USP3-219ENST00000561326 GALMQ96C23 342 aa8.6□□□□□ -1.03
USP3-219ENST00000561326 GAFA1Q96PS6 74 aa8.6□□□□□ -1.03
USP3-219ENST00000561326 C20orf85Q9H1P6 137 aa8.6□□□□□ -1.03
USP3-219ENST00000561326 CHODLQ9H9P2 273 aa8.6□□□□□ -1.03
USP3-219ENST00000561326 MBNL3Q9NUK0 354 aaKnown RBP8.6□□□□□ -1.03
USP3-219ENST00000561326 DCAF16Q9NXF7 216 aa8.6□□□□□ -1.03
USP3-219ENST00000561326 OR6C3Q9NZP0 311 aa8.6□□□□□ -1.03
USP3-219ENST00000561326 KAAG1Q9UBP8 84 aa8.6□□□□□ -1.03
USP3-219ENST00000561326 OPN4Q9UHM6 478 aa8.6□□□□□ -1.03
USP3-219ENST00000561326 KIF25Q9UIL4 384 aa8.6□□□□□ -1.03
USP3-219ENST00000561326 METRNQ9UJH8 293 aa8.6□□□□□ -1.03
USP3-219ENST00000561326 MAB21L2Q9Y586 359 aa8.6□□□□□ -1.03
USP3-219ENST00000561326 ODAMA1E959 279 aa8.59□□□□□ -1.03
USP3-219ENST00000561326 LYNX1G3V0Z9 82 aa8.59□□□□□ -1.03
USP3-219ENST00000561326 OVOL3O00110 214 aa8.59□□□□□ -1.03
USP3-219ENST00000561326 ARPC1BO15143 372 aaKnown RBP8.59□□□□□ -1.03
USP3-219ENST00000561326 BET1O15155 118 aa8.59□□□□□ -1.03
USP3-219ENST00000561326 SPINT2O43291 252 aa8.59□□□□□ -1.03
USP3-219ENST00000561326 PPIHO43447 177 aaKnown RBP8.59□□□□□ -1.03
USP3-219ENST00000561326 RP2O75695 350 aa8.59□□□□□ -1.03
USP3-219ENST00000561326 SCTP09683 121 aa8.59□□□□□ -1.03
USP3-219ENST00000561326 LYNX1P0DP58 116 aa8.59□□□□□ -1.03
USP3-219ENST00000561326 IL2RGP31785 369 aa8.59□□□□□ -1.03
USP3-219ENST00000561326 FCGR2CP31995 323 aa8.59□□□□□ -1.03
USP3-219ENST00000561326 CDKN1AP38936 164 aa8.59□□□□□ -1.03
USP3-219ENST00000561326 GLIPR1P48060 266 aa8.59□□□□□ -1.03
USP3-219ENST00000561326 P2RX3P56373 397 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms