RNA–Protein interactions for RNA: ENST00000561304.5

ZEB1-223, Transcript of zinc finger E-box binding homeobox 1, human

TSL 1 (best)

Gene ZEB1, Length 1,383 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZEB1-223	ENST00000561304	CD34	P28906	385 aa		5.92	□□□□□ -1.46
ZEB1-223	ENST00000561304	PTGFR	P43088	359 aa		5.92	□□□□□ -1.46
ZEB1-223	ENST00000561304	GLP1R	P43220	463 aa		5.92	□□□□□ -1.46
ZEB1-223	ENST00000561304	RPS11	P62280	158 aa	Known RBP eCLIP	5.92	□□□□□ -1.46
ZEB1-223	ENST00000561304	ADARB1	P78563	741 aa	Known RBP	5.92	□□□□□ -1.46
ZEB1-223	ENST00000561304	BDH1	Q02338	343 aa		5.92	□□□□□ -1.46
ZEB1-223	ENST00000561304	MRPL28	Q13084	256 aa	Known RBP	5.92	□□□□□ -1.46
ZEB1-223	ENST00000561304	DIAPH2-AS1	Q14236	149 aa		5.92	□□□□□ -1.46
ZEB1-223	ENST00000561304	RCN1	Q15293	331 aa		5.92	□□□□□ -1.46
ZEB1-223	ENST00000561304	HLA-DRB5	Q30154	266 aa		5.92	□□□□□ -1.46
ZEB1-223	ENST00000561304	RSBN1	Q5VWQ0	802 aa	Predicted RBP	5.92	□□□□□ -1.46
ZEB1-223	ENST00000561304	RPL22L1	Q6P5R6	122 aa	Known RBP	5.92	□□□□□ -1.46
ZEB1-223	ENST00000561304		Q6ZTK2	550 aa		5.92	□□□□□ -1.46
ZEB1-223	ENST00000561304	CHST4	Q8NCG5	386 aa		5.92	□□□□□ -1.46
ZEB1-223	ENST00000561304	ZNF485	Q8NCK3	441 aa		5.92	□□□□□ -1.46
ZEB1-223	ENST00000561304	ZNF555	Q8NEP9	628 aa		5.92	□□□□□ -1.46
ZEB1-223	ENST00000561304	PXT1	Q8NFP0	134 aa		5.92	□□□□□ -1.46
ZEB1-223	ENST00000561304	OR5D14	Q8NGL3	314 aa		5.92	□□□□□ -1.46
ZEB1-223	ENST00000561304	CYGB	Q8WWM9	190 aa		5.92	□□□□□ -1.46
ZEB1-223	ENST00000561304	LEAP2	Q969E1	77 aa		5.92	□□□□□ -1.46
ZEB1-223	ENST00000561304	TMEM106A	Q96A25	262 aa		5.92	□□□□□ -1.46
ZEB1-223	ENST00000561304	SMIM19	Q96E16	107 aa		5.92	□□□□□ -1.46
ZEB1-223	ENST00000561304	PGLYRP3	Q96LB9	341 aa		5.92	□□□□□ -1.46
ZEB1-223	ENST00000561304	RDH12	Q96NR8	316 aa		5.92	□□□□□ -1.46
ZEB1-223	ENST00000561304	CITED2	Q99967	270 aa	Predicted RBP	5.92	□□□□□ -1.46
ZEB1-223	ENST00000561304	GAL3ST2	Q9H3Q3	398 aa		5.92	□□□□□ -1.46
ZEB1-223	ENST00000561304	TAS2R3	Q9NYW6	316 aa		5.92	□□□□□ -1.46
ZEB1-223	ENST00000561304	GLS2	Q9UI32	602 aa		5.92	□□□□□ -1.46
ZEB1-223	ENST00000561304	KIF25	Q9UIL4	384 aa		5.92	□□□□□ -1.46
ZEB1-223	ENST00000561304	DIMT1	Q9UNQ2	313 aa	Known RBP	5.92	□□□□□ -1.46
ZEB1-223	ENST00000561304	COL7A1	Q02388	2944 aa		5.91	□□□□□ -1.46
ZEB1-223	ENST00000561304	TRAV8-7	A0A075B6U6	113 aa		5.91	□□□□□ -1.46
ZEB1-223	ENST00000561304		A0A087X0M5	115 aa		5.91	□□□□□ -1.46
ZEB1-223	ENST00000561304	TRBV5-5	A0A0J9YX44	114 aa		5.91	□□□□□ -1.46
ZEB1-223	ENST00000561304	PNMA8C	A0A1B0GUJ8	204 aa		5.91	□□□□□ -1.46
ZEB1-223	ENST00000561304		A0A1B0GX30	115 aa		5.91	□□□□□ -1.46
ZEB1-223	ENST00000561304	SHISA3	A0PJX4	238 aa		5.91	□□□□□ -1.46
ZEB1-223	ENST00000561304	ZNF729	A6NN14	1252 aa	Predicted RBP	5.91	□□□□□ -1.46
ZEB1-223	ENST00000561304	BUB1B-PAK6	H3BSN5	160 aa		5.91	□□□□□ -1.46
ZEB1-223	ENST00000561304	OGG1	O15527	345 aa		5.91	□□□□□ -1.46
ZEB1-223	ENST00000561304	AMY1A	P04745	511 aa		5.91	□□□□□ -1.46
ZEB1-223	ENST00000561304	AMY2A	P04746	511 aa		5.91	□□□□□ -1.46
ZEB1-223	ENST00000561304	IGFBP3	P17936	291 aa	Predicted RBP	5.91	□□□□□ -1.46
ZEB1-223	ENST00000561304	NFYB	P25208	207 aa		5.91	□□□□□ -1.46
ZEB1-223	ENST00000561304	DCK	P27707	260 aa		5.91	□□□□□ -1.46
ZEB1-223	ENST00000561304	SSTR5	P35346	364 aa		5.91	□□□□□ -1.46
ZEB1-223	ENST00000561304	IL13RA2	Q14627	380 aa		5.91	□□□□□ -1.46
ZEB1-223	ENST00000561304	LTC4S	Q16873	150 aa		5.91	□□□□□ -1.46
ZEB1-223	ENST00000561304	BEAN1	Q3B7T3	259 aa		5.91	□□□□□ -1.46
ZEB1-223	ENST00000561304	NSUN5P1	Q3KNT7	163 aa		5.91	□□□□□ -1.46
ZEB1-223	ENST00000561304	CCDC58	Q4VC31	144 aa		5.91	□□□□□ -1.46
ZEB1-223	ENST00000561304	PAN3	Q58A45	887 aa	Known RBP	5.91	□□□□□ -1.46
ZEB1-223	ENST00000561304	TPTE2P1	Q5T6R2	138 aa		5.91	□□□□□ -1.46
ZEB1-223	ENST00000561304	DDI2	Q5TDH0	399 aa		5.91	□□□□□ -1.46
ZEB1-223	ENST00000561304	DMKN	Q6E0U4	476 aa	Predicted RBP	5.91	□□□□□ -1.46
ZEB1-223	ENST00000561304	FAM53A	Q6NSI3	398 aa	Predicted RBP	5.91	□□□□□ -1.46
ZEB1-223	ENST00000561304	C11orf88	Q6PI97	169 aa		5.91	□□□□□ -1.46
ZEB1-223	ENST00000561304	C10orf99	Q6UWK7	81 aa		5.91	□□□□□ -1.46
ZEB1-223	ENST00000561304	ASCL4	Q6XD76	172 aa		5.91	□□□□□ -1.46
ZEB1-223	ENST00000561304	RTN4RL2	Q86UN3	420 aa		5.91	□□□□□ -1.46
ZEB1-223	ENST00000561304	C10orf67	Q8IYJ2	551 aa		5.91	□□□□□ -1.46
ZEB1-223	ENST00000561304		Q8NFD4	153 aa		5.91	□□□□□ -1.46
ZEB1-223	ENST00000561304	MRGPRD	Q8TDS7	321 aa		5.91	□□□□□ -1.46
ZEB1-223	ENST00000561304	GPR148	Q8TDV2	347 aa		5.91	□□□□□ -1.46
ZEB1-223	ENST00000561304	GGH	Q92820	318 aa		5.91	□□□□□ -1.46
ZEB1-223	ENST00000561304	GPER1	Q99527	375 aa		5.91	□□□□□ -1.46
ZEB1-223	ENST00000561304	SLC25A33	Q9BSK2	321 aa		5.91	□□□□□ -1.46
ZEB1-223	ENST00000561304	PRSS22	Q9GZN4	317 aa		5.91	□□□□□ -1.46
ZEB1-223	ENST00000561304	MMP28	Q9H239	520 aa		5.91	□□□□□ -1.46
ZEB1-223	ENST00000561304	RHOF	Q9HBH0	211 aa		5.91	□□□□□ -1.46
ZEB1-223	ENST00000561304	CALY	Q9NYX4	217 aa		5.91	□□□□□ -1.46
ZEB1-223	ENST00000561304	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	5.91	□□□□□ -1.46
ZEB1-223	ENST00000561304	DPM3	Q9P2X0	92 aa		5.91	□□□□□ -1.46
ZEB1-223	ENST00000561304	PCDHGB5	Q9Y5G0	923 aa		5.91	□□□□□ -1.46
ZEB1-223	ENST00000561304	MEIKIN	A0A087WXM9	373 aa		5.9	□□□□□ -1.47
ZEB1-223	ENST00000561304	KBTBD11-OT1	A0A1B0GTJ5	212 aa		5.9	□□□□□ -1.47
ZEB1-223	ENST00000561304		A0A1W2PPE3	182 aa		5.9	□□□□□ -1.47
ZEB1-223	ENST00000561304		A0A1W2PPI3	338 aa		5.9	□□□□□ -1.47
ZEB1-223	ENST00000561304		A0A1W2PPK0	400 aa		5.9	□□□□□ -1.47
ZEB1-223	ENST00000561304	FUOM	A2VDF0	154 aa		5.9	□□□□□ -1.47
ZEB1-223	ENST00000561304	LEUTX	A8MZ59	168 aa		5.9	□□□□□ -1.47
ZEB1-223	ENST00000561304	ANKRD65	E5RJM6	399 aa		5.9	□□□□□ -1.47
ZEB1-223	ENST00000561304	GEMIN2	O14893	280 aa	Known RBP	5.9	□□□□□ -1.47
ZEB1-223	ENST00000561304	XPNPEP2	O43895	674 aa		5.9	□□□□□ -1.47
ZEB1-223	ENST00000561304	IL1A	P01583	271 aa		5.9	□□□□□ -1.47
ZEB1-223	ENST00000561304	PRB2	P02812	416 aa	Predicted RBP	5.9	□□□□□ -1.47
ZEB1-223	ENST00000561304	OPN1MW	P04001	364 aa		5.9	□□□□□ -1.47
ZEB1-223	ENST00000561304	ALDOB	P05062	364 aa		5.9	□□□□□ -1.47
ZEB1-223	ENST00000561304	OPN1MW2	P0DN77	364 aa		5.9	□□□□□ -1.47
ZEB1-223	ENST00000561304	OPN1MW3	P0DN78	364 aa		5.9	□□□□□ -1.47
ZEB1-223	ENST00000561304	SERPINA2	P20848	420 aa		5.9	□□□□□ -1.47
ZEB1-223	ENST00000561304	ZNF93	P35789	620 aa	Predicted RBP	5.9	□□□□□ -1.47
ZEB1-223	ENST00000561304	VDAC2	P45880	294 aa	Predicted RBP	5.9	□□□□□ -1.47
ZEB1-223	ENST00000561304	GNG10	P50151	68 aa		5.9	□□□□□ -1.47
ZEB1-223	ENST00000561304	RBM11	P57052	281 aa	Known RBP	5.9	□□□□□ -1.47
ZEB1-223	ENST00000561304	RBM39	Q14498	530 aa	Known RBP	5.9	□□□□□ -1.47
ZEB1-223	ENST00000561304	RSU1	Q15404	277 aa		5.9	□□□□□ -1.47
ZEB1-223	ENST00000561304	TCTEX1D4	Q5JR98	221 aa		5.9	□□□□□ -1.47
ZEB1-223	ENST00000561304	OR52W1	Q6IF63	320 aa		5.9	□□□□□ -1.47
ZEB1-223	ENST00000561304	SUMF2	Q8NBJ7	301 aa		5.9	□□□□□ -1.47

Retrieved 100 of 20,778 RNA–protein pairs in 42 ms