RNA–Protein interactions for RNA: ENST00000560521.5

RABGGTA-217, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-217ENST00000560521 CDK5Q00535 292 aa6.86□□□□□ -1.31
RABGGTA-217ENST00000560521 BNIP1Q12981 228 aa6.86□□□□□ -1.31
RABGGTA-217ENST00000560521 PDZK1IP1Q13113 114 aa6.86□□□□□ -1.31
RABGGTA-217ENST00000560521 LTC4SQ16873 150 aa6.86□□□□□ -1.31
RABGGTA-217ENST00000560521 ZNF322Q6U7Q0 402 aaPredicted RBP6.86□□□□□ -1.31
RABGGTA-217ENST00000560521 SATL1Q86VE3 508 aa6.86□□□□□ -1.31
RABGGTA-217ENST00000560521 ZNF565Q8N9K5 539 aa6.86□□□□□ -1.31
RABGGTA-217ENST00000560521 CCDC197Q8NCU1 140 aa6.86□□□□□ -1.31
RABGGTA-217ENST00000560521 OR10G2Q8NGC3 310 aa6.86□□□□□ -1.31
RABGGTA-217ENST00000560521 OR10X1Q8NGY0 326 aa6.86□□□□□ -1.31
RABGGTA-217ENST00000560521 OR4C12Q96R67 309 aa6.86□□□□□ -1.31
RABGGTA-217ENST00000560521 FEVQ99581 238 aa6.86□□□□□ -1.31
RABGGTA-217ENST00000560521 HIPK2Q9H2X6 1198 aa6.86□□□□□ -1.31
RABGGTA-217ENST00000560521 PLEKHA1Q9HB21 404 aa6.86□□□□□ -1.31
RABGGTA-217ENST00000560521 MRM2Q9UI43 246 aaKnown RBP6.86□□□□□ -1.31
RABGGTA-217ENST00000560521 SAMHD1Q9Y3Z3 626 aaKnown RBP6.86□□□□□ -1.31
RABGGTA-217ENST00000560521 C12orf77C9JDV5 145 aa6.85□□□□□ -1.31
RABGGTA-217ENST00000560521 SYT7O43581 403 aa6.85□□□□□ -1.31
RABGGTA-217ENST00000560521 DCTN3O75935 186 aa6.85□□□□□ -1.31
RABGGTA-217ENST00000560521 KDM4BO94953 1096 aa6.85□□□□□ -1.31
RABGGTA-217ENST00000560521 IL1AP01583 271 aa6.85□□□□□ -1.31
RABGGTA-217ENST00000560521 HMGN1P05114 100 aa6.85□□□□□ -1.31
RABGGTA-217ENST00000560521 C21orf33P30042 268 aaPredicted RBP6.85□□□□□ -1.31
RABGGTA-217ENST00000560521 GLP1RP43220 463 aa6.85□□□□□ -1.31
RABGGTA-217ENST00000560521 MTCP1P56278 107 aa6.85□□□□□ -1.31
RABGGTA-217ENST00000560521 PITPNAQ00169 270 aa6.85□□□□□ -1.31
RABGGTA-217ENST00000560521 GALEQ14376 348 aa6.85□□□□□ -1.31
RABGGTA-217ENST00000560521 CDK5R1Q15078 307 aa6.85□□□□□ -1.31
RABGGTA-217ENST00000560521 SLC16A12Q6ZSM3 486 aa6.85□□□□□ -1.31
RABGGTA-217ENST00000560521 RPP25LQ8N5L8 163 aaKnown RBP6.85□□□□□ -1.31
RABGGTA-217ENST00000560521 DNAAF1Q8NEP3 725 aa6.85□□□□□ -1.31
RABGGTA-217ENST00000560521 OR51T1Q8NGJ9 327 aa6.85□□□□□ -1.31
RABGGTA-217ENST00000560521 RFT1Q96AA3 541 aa6.85□□□□□ -1.31
RABGGTA-217ENST00000560521 CHCHD3Q9NX63 227 aaKnown RBP6.85□□□□□ -1.31
RABGGTA-217ENST00000560521 ACTR3BQ9P1U1 418 aa6.85□□□□□ -1.31
RABGGTA-217ENST00000560521 ZNF107Q9UII5 783 aaPredicted RBP6.85□□□□□ -1.31
RABGGTA-217ENST00000560521 KIF25Q9UIL4 384 aa6.85□□□□□ -1.31
RABGGTA-217ENST00000560521 ARL2BPQ9Y2Y0 163 aa6.85□□□□□ -1.31
RABGGTA-217ENST00000560521 TMEM14AQ9Y6G1 99 aa6.85□□□□□ -1.31
RABGGTA-217ENST00000560521 VPS13DQ5THJ4 4388 aa6.85□□□□□ -1.31
RABGGTA-217ENST00000560521 MEIKINA0A087WXM9 373 aa6.84□□□□□ -1.31
RABGGTA-217ENST00000560521 DEGS1O15121 323 aa6.84□□□□□ -1.31
RABGGTA-217ENST00000560521 ATP6V0E1O15342 81 aa6.84□□□□□ -1.31
RABGGTA-217ENST00000560521 CCDC22O60826 627 aa6.84□□□□□ -1.31
RABGGTA-217ENST00000560521 RPP14O95059 124 aaKnown RBP6.84□□□□□ -1.31
RABGGTA-217ENST00000560521 SERPINA3P01011 423 aa6.84□□□□□ -1.31
RABGGTA-217ENST00000560521 SLC2A2P11168 524 aaPredicted RBP6.84□□□□□ -1.31
RABGGTA-217ENST00000560521 VHLP40337 213 aa6.84□□□□□ -1.31
RABGGTA-217ENST00000560521 ACTR3P61158 418 aa6.84□□□□□ -1.31
RABGGTA-217ENST00000560521 RNLSQ5VYX0 342 aa6.84□□□□□ -1.31
RABGGTA-217ENST00000560521 TMEM236Q5W0B7 351 aa6.84□□□□□ -1.31
RABGGTA-217ENST00000560521 OR2T5Q6IEZ7 315 aa6.84□□□□□ -1.31
RABGGTA-217ENST00000560521 CYP2R1Q6VVX0 501 aa6.84□□□□□ -1.31
RABGGTA-217ENST00000560521 LINC00322Q6ZN03 302 aaPredicted RBP6.84□□□□□ -1.31
RABGGTA-217ENST00000560521 PGAM4Q8N0Y7 254 aa6.84□□□□□ -1.31
RABGGTA-217ENST00000560521 LINC00311Q8N616 119 aa6.84□□□□□ -1.31
RABGGTA-217ENST00000560521 MINDY2Q8NBR6 621 aa6.84□□□□□ -1.31
RABGGTA-217ENST00000560521 CHST4Q8NCG5 386 aa6.84□□□□□ -1.31
RABGGTA-217ENST00000560521 OR10A7Q8NGE5 316 aa6.84□□□□□ -1.31
RABGGTA-217ENST00000560521 OR8H1Q8NGG4 311 aa6.84□□□□□ -1.31
RABGGTA-217ENST00000560521 OR2T29Q8NH02 315 aa6.84□□□□□ -1.31
RABGGTA-217ENST00000560521 MRGPRDQ8TDS7 321 aa6.84□□□□□ -1.31
RABGGTA-217ENST00000560521 RTN4IP1Q8WWV3 396 aaPredicted RBP6.84□□□□□ -1.31
RABGGTA-217ENST00000560521 THAP7Q9BT49 309 aaPredicted RBP6.84□□□□□ -1.31
RABGGTA-217ENST00000560521 TMED9Q9BVK6 235 aa6.84□□□□□ -1.31
RABGGTA-217ENST00000560521 NCOR1P1Q9H4R4 102 aa6.84□□□□□ -1.31
RABGGTA-217ENST00000560521 REEP1Q9H902 201 aa6.84□□□□□ -1.31
RABGGTA-217ENST00000560521 KRT84Q9NSB2 600 aa6.84□□□□□ -1.31
RABGGTA-217ENST00000560521 TRAV39A0A0B4J263 110 aa6.83□□□□□ -1.32
RABGGTA-217ENST00000560521 TRAV41A0A0B4J266 112 aa6.83□□□□□ -1.32
RABGGTA-217ENST00000560521 TCRBV5S2A0A599 114 aa6.83□□□□□ -1.32
RABGGTA-217ENST00000560521 HSPB6O14558 160 aa6.83□□□□□ -1.32
RABGGTA-217ENST00000560521 SOX15O60248 233 aa6.83□□□□□ -1.32
RABGGTA-217ENST00000560521 SNX3O60493 162 aa6.83□□□□□ -1.32
RABGGTA-217ENST00000560521 BRI3O95415 125 aa6.83□□□□□ -1.32
RABGGTA-217ENST00000560521 HSPB1P04792 205 aaKnown RBP6.83□□□□□ -1.32
RABGGTA-217ENST00000560521 LGALS1P09382 135 aaKnown RBP6.83□□□□□ -1.32
RABGGTA-217ENST00000560521 ATF1P18846 271 aa6.83□□□□□ -1.32
RABGGTA-217ENST00000560521 FSTP19883 344 aa6.83□□□□□ -1.32
RABGGTA-217ENST00000560521 SSTR5P35346 364 aa6.83□□□□□ -1.32
RABGGTA-217ENST00000560521 SSX6Q7RTT6 188 aa6.83□□□□□ -1.32
RABGGTA-217ENST00000560521 TMEM179BQ7Z7N9 219 aa6.83□□□□□ -1.32
RABGGTA-217ENST00000560521 ANKRD13BQ86YJ7 626 aa6.83□□□□□ -1.32
RABGGTA-217ENST00000560521 RDH10Q8IZV5 341 aa6.83□□□□□ -1.32
RABGGTA-217ENST00000560521 YIPF7Q8N8F6 280 aa6.83□□□□□ -1.32
RABGGTA-217ENST00000560521 PLPPR1Q8TBJ4 325 aa6.83□□□□□ -1.32
RABGGTA-217ENST00000560521 GIPC3Q8TF64 312 aa6.83□□□□□ -1.32
RABGGTA-217ENST00000560521 CASTOR1Q8WTX7 329 aa6.83□□□□□ -1.32
RABGGTA-217ENST00000560521 GATAD1Q8WUU5 269 aa6.83□□□□□ -1.32
RABGGTA-217ENST00000560521 RNF166Q96A37 237 aaPredicted RBP6.83□□□□□ -1.32
RABGGTA-217ENST00000560521 CMTM5Q96DZ9 223 aa6.83□□□□□ -1.32
RABGGTA-217ENST00000560521 ADAT3Q96EY9 351 aaPredicted RBP6.83□□□□□ -1.32
RABGGTA-217ENST00000560521 CNN2Q99439 309 aaKnown RBP6.83□□□□□ -1.32
RABGGTA-217ENST00000560521 ZCCHC4Q9H5U6 513 aa6.83□□□□□ -1.32
RABGGTA-217ENST00000560521 TUBA4BQ9H853 241 aa6.83□□□□□ -1.32
RABGGTA-217ENST00000560521 STUB1Q9UNE7 303 aa6.83□□□□□ -1.32
RABGGTA-217ENST00000560521 MRPS28Q9Y2Q9 187 aaKnown RBP6.83□□□□□ -1.32
RABGGTA-217ENST00000560521 IGHV7-81A0A0B4J1V7 117 aa6.82□□□□□ -1.32
RABGGTA-217ENST00000560521 TRAV24A0A0B4J272 114 aa6.82□□□□□ -1.32
RABGGTA-217ENST00000560521 H0YJX3 145 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms