RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 C7orf77A4D0Y5 90 aa12.28□□□□□ -0.44
CSPG4P12-202ENST00000559989 C7orf71A4D174 169 aa12.28□□□□□ -0.44
CSPG4P12-202ENST00000559989 C17orf51A8MQB3 221 aa12.28□□□□□ -0.44
CSPG4P12-202ENST00000559989 MFAP2P55001 183 aa12.28□□□□□ -0.44
CSPG4P12-202ENST00000559989 PTOV1Q86YD1 416 aa12.28□□□□□ -0.44
CSPG4P12-202ENST00000559989 OR13H1Q8NG92 308 aa12.28□□□□□ -0.44
CSPG4P12-202ENST00000559989 RBKSQ9H477 322 aa12.28□□□□□ -0.44
CSPG4P12-202ENST00000559989 PAPPA-AS1Q5QFB9 102 aa12.27□□□□□ -0.44
CSPG4P12-202ENST00000559989 C1orf220Q5T0J3 134 aa12.27□□□□□ -0.44
CSPG4P12-202ENST00000559989 ZNF385CQ66K41 422 aaPredicted RBP12.27□□□□□ -0.44
CSPG4P12-202ENST00000559989 OR10D3Q8NH80 312 aa12.27□□□□□ -0.44
CSPG4P12-202ENST00000559989 ALKBH3Q96Q83 286 aaPredicted RBP12.27□□□□□ -0.44
CSPG4P12-202ENST00000559989 PRDM14Q9GZV8 571 aa12.27□□□□□ -0.44
CSPG4P12-202ENST00000559989 SEZ6L2Q6UXD5 910 aa12.27□□□□□ -0.44
CSPG4P12-202ENST00000559989 MOGAT3Q86VF5 341 aa12.27□□□□□ -0.44
CSPG4P12-202ENST00000559989 N4BP2Q86UW6 1770 aaPredicted RBP12.27□□□□□ -0.44
CSPG4P12-202ENST00000559989 PITX3O75364 302 aa12.27□□□□□ -0.45
CSPG4P12-202ENST00000559989 CDS2O95674 445 aa12.27□□□□□ -0.45
CSPG4P12-202ENST00000559989 EPPINO95925 133 aa12.27□□□□□ -0.45
CSPG4P12-202ENST00000559989 ZNF707Q96C28 371 aaPredicted RBP12.27□□□□□ -0.45
CSPG4P12-202ENST00000559989 HDHD3Q9BSH5 251 aaPredicted RBP12.27□□□□□ -0.45
CSPG4P12-202ENST00000559989 CTXND1A0A1B0GTU2 59 aa12.27□□□□□ -0.45
CSPG4P12-202ENST00000559989 KCNAB3O43448 404 aa12.27□□□□□ -0.45
CSPG4P12-202ENST00000559989 PHLPP1O60346 1717 aa12.27□□□□□ -0.45
CSPG4P12-202ENST00000559989 MRPS11P82912 194 aaKnown RBP12.27□□□□□ -0.45
CSPG4P12-202ENST00000559989 C4orf45Q96LM5 186 aa12.27□□□□□ -0.45
CSPG4P12-202ENST00000559989 MTCH2Q9Y6C9 303 aa12.27□□□□□ -0.45
CSPG4P12-202ENST00000559989 A0A1B0GV90 55 aa12.27□□□□□ -0.45
CSPG4P12-202ENST00000559989 FCGR2BP31994 310 aaPredicted RBP12.27□□□□□ -0.45
CSPG4P12-202ENST00000559989 CLEC18BQ6UXF7 455 aa12.27□□□□□ -0.45
CSPG4P12-202ENST00000559989 LINC00470Q9BZP3 86 aa12.27□□□□□ -0.45
CSPG4P12-202ENST00000559989 C9orf172C9J069 976 aa12.26□□□□□ -0.45
CSPG4P12-202ENST00000559989 OR10S1Q8NGN2 331 aa12.26□□□□□ -0.45
CSPG4P12-202ENST00000559989 GFYI3L273 518 aa12.26□□□□□ -0.45
CSPG4P12-202ENST00000559989 CTSDP07339 412 aaPredicted RBP12.26□□□□□ -0.45
CSPG4P12-202ENST00000559989 MAVSQ7Z434 540 aa12.26□□□□□ -0.45
CSPG4P12-202ENST00000559989 STPG3Q8N7X2 389 aa12.26□□□□□ -0.45
CSPG4P12-202ENST00000559989 AICDAQ9GZX7 198 aa12.26□□□□□ -0.45
CSPG4P12-202ENST00000559989 LINC00862A6NCI5 91 aa12.26□□□□□ -0.45
CSPG4P12-202ENST00000559989 ID4P47928 161 aa12.26□□□□□ -0.45
CSPG4P12-202ENST00000559989 CICQ96RK0 1608 aaPredicted RBP12.26□□□□□ -0.45
CSPG4P12-202ENST00000559989 PLPP2O43688 288 aa12.26□□□□□ -0.45
CSPG4P12-202ENST00000559989 PARP11Q9NR21 331 aa12.26□□□□□ -0.45
CSPG4P12-202ENST00000559989 LINC01553A4QN01 128 aa12.26□□□□□ -0.45
CSPG4P12-202ENST00000559989 LOXL3P58215 753 aa12.26□□□□□ -0.45
CSPG4P12-202ENST00000559989 OR1L8Q8NGR8 309 aa12.26□□□□□ -0.45
CSPG4P12-202ENST00000559989 LOXL2Q9Y4K0 774 aa12.26□□□□□ -0.45
CSPG4P12-202ENST00000559989 RIMBP3CA6NJZ7 1639 aa12.26□□□□□ -0.45
CSPG4P12-202ENST00000559989 RIMBP3BA6NNM3 1639 aa12.26□□□□□ -0.45
CSPG4P12-202ENST00000559989 RIMBP3Q9UFD9 1639 aa12.26□□□□□ -0.45
CSPG4P12-202ENST00000559989 A0A1B0GU03 582 aa12.26□□□□□ -0.45
CSPG4P12-202ENST00000559989 S1PR2O95136 353 aa12.26□□□□□ -0.45
CSPG4P12-202ENST00000559989 SUMO2P61956 95 aaKnown RBP12.26□□□□□ -0.45
CSPG4P12-202ENST00000559989 PDCD1Q15116 288 aa12.26□□□□□ -0.45
CSPG4P12-202ENST00000559989 RFESDQ8TAC1 157 aa12.26□□□□□ -0.45
CSPG4P12-202ENST00000559989 BCL2L10Q9HD36 194 aa12.26□□□□□ -0.45
CSPG4P12-202ENST00000559989 MOSPD3O75425 235 aa12.25□□□□□ -0.45
CSPG4P12-202ENST00000559989 SAMD13Q5VXD3 122 aa12.25□□□□□ -0.45
CSPG4P12-202ENST00000559989 CBLN2Q8IUK8 224 aa12.25□□□□□ -0.45
CSPG4P12-202ENST00000559989 OR2K2Q8NGT1 345 aa12.25□□□□□ -0.45
CSPG4P12-202ENST00000559989 TSPAN32Q96QS1 320 aa12.25□□□□□ -0.45
CSPG4P12-202ENST00000559989 C3orf80F5H4A9 247 aa12.25□□□□□ -0.45
CSPG4P12-202ENST00000559989 LINC00596Q86U02 117 aa12.25□□□□□ -0.45
CSPG4P12-202ENST00000559989 C8orf44Q96CB5 159 aa12.25□□□□□ -0.45
CSPG4P12-202ENST00000559989 P2RX4Q99571 388 aa12.25□□□□□ -0.45
CSPG4P12-202ENST00000559989 TRAV21A0A0B4J279 112 aa12.25□□□□□ -0.45
CSPG4P12-202ENST00000559989 SRSF5Q13243 272 aaKnown RBP12.25□□□□□ -0.45
CSPG4P12-202ENST00000559989 ZBTB42B2RXF5 422 aa12.25□□□□□ -0.45
CSPG4P12-202ENST00000559989 CYB5R3P00387 301 aaPredicted RBP12.25□□□□□ -0.45
CSPG4P12-202ENST00000559989 IGKV3D-15A0A087WSY6 115 aa12.25□□□□□ -0.45
CSPG4P12-202ENST00000559989 CDK2AP2O75956 126 aa12.25□□□□□ -0.45
CSPG4P12-202ENST00000559989 IGKV3-15P01624 115 aa12.25□□□□□ -0.45
CSPG4P12-202ENST00000559989 HIST1H1AQ02539 215 aaPredicted RBP12.25□□□□□ -0.45
CSPG4P12-202ENST00000559989 C2orf83Q53S99 150 aa12.25□□□□□ -0.45
CSPG4P12-202ENST00000559989 HLA-DQA1P01909 254 aa12.25□□□□□ -0.45
CSPG4P12-202ENST00000559989 SBK3P0C264 359 aa12.25□□□□□ -0.45
CSPG4P12-202ENST00000559989 CDKN2AP42771 156 aaKnown RBP12.25□□□□□ -0.45
CSPG4P12-202ENST00000559989 FOXF1Q12946 379 aa12.25□□□□□ -0.45
CSPG4P12-202ENST00000559989 IBA57Q5T440 356 aaKnown RBP12.25□□□□□ -0.45
CSPG4P12-202ENST00000559989 OR1P1Q8NH06 330 aa12.25□□□□□ -0.45
CSPG4P12-202ENST00000559989 SGMS2Q8NHU3 365 aa12.25□□□□□ -0.45
CSPG4P12-202ENST00000559989 NEUROG1Q92886 237 aa12.25□□□□□ -0.45
CSPG4P12-202ENST00000559989 NPFFR1Q9GZQ6 430 aa12.25□□□□□ -0.45
CSPG4P12-202ENST00000559989 SHISA7A6NL88 538 aa12.24□□□□□ -0.45
CSPG4P12-202ENST00000559989 DAOP14920 347 aa12.24□□□□□ -0.45
CSPG4P12-202ENST00000559989 TMEM179BQ7Z7N9 219 aa12.24□□□□□ -0.45
CSPG4P12-202ENST00000559989 ZNF384Q8TF68 577 aa12.24□□□□□ -0.45
CSPG4P12-202ENST00000559989 CLN8Q9UBY8 286 aa12.24□□□□□ -0.45
CSPG4P12-202ENST00000559989 IGKV3D-11A0A0A0MRZ8 115 aa12.24□□□□□ -0.45
CSPG4P12-202ENST00000559989 C19orf67A6NJJ6 358 aa12.24□□□□□ -0.45
CSPG4P12-202ENST00000559989 TMEM262E9PQX1 116 aa12.24□□□□□ -0.45
CSPG4P12-202ENST00000559989 FGF17O60258 216 aa12.24□□□□□ -0.45
CSPG4P12-202ENST00000559989 IGKV3-11P04433 115 aa12.24□□□□□ -0.45
CSPG4P12-202ENST00000559989 EPHA8P29322 1005 aaPredicted RBP12.24□□□□□ -0.45
CSPG4P12-202ENST00000559989 TCF24Q7RTU0 167 aa12.24□□□□□ -0.45
CSPG4P12-202ENST00000559989 WDR34Q96EX3 536 aa12.24□□□□□ -0.45
CSPG4P12-202ENST00000559989 KIR2DL4Q99706 377 aa12.24□□□□□ -0.45
CSPG4P12-202ENST00000559989 CACNA1SQ13698 1873 aa12.24□□□□□ -0.45
CSPG4P12-202ENST00000559989 SHPRHQ149N8 1683 aa12.24□□□□□ -0.45
CSPG4P12-202ENST00000559989 LIPFP07098 398 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms