RNA–Protein interactions for RNA: ENST00000559849.5

CHRNB4-204, Transcript of cholinergic receptor nicotinic beta 4 subunit, human

TSL 1 (best)

Gene CHRNB4, Length 2,080 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHRNB4-204	ENST00000559849	NCOR1P1	Q9H4R4	102 aa		11.16	□□□□□ -0.62
CHRNB4-204	ENST00000559849	ZMAT3	Q9HA38	289 aa	Known RBP	11.16	□□□□□ -0.62
CHRNB4-204	ENST00000559849	SPACA1	Q9HBV2	294 aa		11.16	□□□□□ -0.62
CHRNB4-204	ENST00000559849	ING3	Q9NXR8	418 aa		11.16	□□□□□ -0.62
CHRNB4-204	ENST00000559849	TAS2R3	Q9NYW6	316 aa		11.16	□□□□□ -0.62
CHRNB4-204	ENST00000559849	OR6C3	Q9NZP0	311 aa		11.16	□□□□□ -0.62
CHRNB4-204	ENST00000559849		A0A1W2PRD5	423 aa		11.15	□□□□□ -0.62
CHRNB4-204	ENST00000559849		A0A1W2PRF3	423 aa		11.15	□□□□□ -0.62
CHRNB4-204	ENST00000559849		A0A1W2PRM7	423 aa		11.15	□□□□□ -0.62
CHRNB4-204	ENST00000559849	CRTAP	O75718	401 aa	Predicted RBP	11.15	□□□□□ -0.62
CHRNB4-204	ENST00000559849	FBP1	P09467	338 aa		11.15	□□□□□ -0.62
CHRNB4-204	ENST00000559849	MGMT	P16455	207 aa		11.15	□□□□□ -0.62
CHRNB4-204	ENST00000559849	GAL	P22466	123 aa		11.15	□□□□□ -0.62
CHRNB4-204	ENST00000559849	HTR2C	P28335	458 aa		11.15	□□□□□ -0.62
CHRNB4-204	ENST00000559849	SAA4	P35542	130 aa		11.15	□□□□□ -0.62
CHRNB4-204	ENST00000559849	SLC9A3R2	Q15599	337 aa		11.15	□□□□□ -0.62
CHRNB4-204	ENST00000559849	ATAD3C	Q5T2N8	411 aa		11.15	□□□□□ -0.62
CHRNB4-204	ENST00000559849	SLC16A12	Q6ZSM3	486 aa		11.15	□□□□□ -0.62
CHRNB4-204	ENST00000559849	TMEM104	Q8NE00	496 aa		11.15	□□□□□ -0.62
CHRNB4-204	ENST00000559849	OR13D1	Q8NGV5	346 aa		11.15	□□□□□ -0.62
CHRNB4-204	ENST00000559849	DUX5	Q96PT3	197 aa		11.15	□□□□□ -0.62
CHRNB4-204	ENST00000559849	BANF2	Q9H503	90 aa		11.15	□□□□□ -0.62
CHRNB4-204	ENST00000559849	TRDV1	A0A1B0GX56	115 aa		11.15	□□□□□ -0.63
CHRNB4-204	ENST00000559849	FAM90A10P	A6NDY2	464 aa		11.15	□□□□□ -0.63
CHRNB4-204	ENST00000559849	FAM90A18P	A6NE21	464 aa		11.15	□□□□□ -0.63
CHRNB4-204	ENST00000559849	FAM90A16P	A6NEW6	464 aa		11.15	□□□□□ -0.63
CHRNB4-204	ENST00000559849	FAM90A20P	A6NIJ5	464 aa		11.15	□□□□□ -0.63
CHRNB4-204	ENST00000559849	FAM90A8P	A6NJQ4	464 aa		11.15	□□□□□ -0.63
CHRNB4-204	ENST00000559849	FAM90A7P	A6NKC0	464 aa		11.15	□□□□□ -0.63
CHRNB4-204	ENST00000559849	FAM90A22P	A8MWA6	464 aa		11.15	□□□□□ -0.63
CHRNB4-204	ENST00000559849	FAM90A12P	A8MX19	464 aa		11.15	□□□□□ -0.63
CHRNB4-204	ENST00000559849	FAM90A5P	A8MXJ8	464 aa		11.15	□□□□□ -0.63
CHRNB4-204	ENST00000559849	FAM90A23P	A8MXZ1	464 aa		11.15	□□□□□ -0.63
CHRNB4-204	ENST00000559849		H3BUI4	141 aa		11.15	□□□□□ -0.63
CHRNB4-204	ENST00000559849	HOXA3	O43365	443 aa	Predicted RBP	11.15	□□□□□ -0.63
CHRNB4-204	ENST00000559849	FAM90A15P	P0C7V4	464 aa		11.15	□□□□□ -0.63
CHRNB4-204	ENST00000559849	FAM90A13P	P0C7W8	464 aa		11.15	□□□□□ -0.63
CHRNB4-204	ENST00000559849	FAM90A14P	P0C7W9	464 aa		11.15	□□□□□ -0.63
CHRNB4-204	ENST00000559849	FAM90A24P	P0C7X0	464 aa		11.15	□□□□□ -0.63
CHRNB4-204	ENST00000559849	CD36	P16671	472 aa		11.15	□□□□□ -0.63
CHRNB4-204	ENST00000559849	PNKD	Q8N490	385 aa		11.15	□□□□□ -0.63
CHRNB4-204	ENST00000559849	OR6M1	Q8NGM8	313 aa		11.15	□□□□□ -0.63
CHRNB4-204	ENST00000559849	SPATA3	Q8NHX4	192 aa		11.15	□□□□□ -0.63
CHRNB4-204	ENST00000559849	SELENOI	Q9C0D9	397 aa		11.15	□□□□□ -0.63
CHRNB4-204	ENST00000559849	ZNF581	Q9P0T4	197 aa		11.15	□□□□□ -0.63
CHRNB4-204	ENST00000559849	AK6	Q9Y3D8	172 aa	Known RBP	11.15	□□□□□ -0.63
CHRNB4-204	ENST00000559849	MEIKIN	A0A087WXM9	373 aa		11.14	□□□□□ -0.63
CHRNB4-204	ENST00000559849	SLC22A1	O15245	554 aa		11.14	□□□□□ -0.63
CHRNB4-204	ENST00000559849	GABARAP	O95166	117 aa		11.14	□□□□□ -0.63
CHRNB4-204	ENST00000559849	PAH	P00439	452 aa		11.14	□□□□□ -0.63
CHRNB4-204	ENST00000559849	MELTF	P08582	738 aa		11.14	□□□□□ -0.63
CHRNB4-204	ENST00000559849	KCNG3	Q8TAE7	436 aa		11.14	□□□□□ -0.63
CHRNB4-204	ENST00000559849	SSMEM1	Q8WWF3	244 aa		11.14	□□□□□ -0.63
CHRNB4-204	ENST00000559849	KIF25	Q9UIL4	384 aa		11.14	□□□□□ -0.63
CHRNB4-204	ENST00000559849	CLPX	O76031	633 aa		11.13	□□□□□ -0.63
CHRNB4-204	ENST00000559849	RNASE1	P07998	156 aa	Known RBP	11.13	□□□□□ -0.63
CHRNB4-204	ENST00000559849	VSIG8	P0DPA2	414 aa		11.13	□□□□□ -0.63
CHRNB4-204	ENST00000559849	COX7A1	P24310	79 aa		11.13	□□□□□ -0.63
CHRNB4-204	ENST00000559849	LGALS4	P56470	323 aa		11.13	□□□□□ -0.63
CHRNB4-204	ENST00000559849	RBM39	Q14498	530 aa	Known RBP	11.13	□□□□□ -0.63
CHRNB4-204	ENST00000559849	CTF1	Q16619	201 aa		11.13	□□□□□ -0.63
CHRNB4-204	ENST00000559849	RSBN1	Q5VWQ0	802 aa	Predicted RBP	11.13	□□□□□ -0.63
CHRNB4-204	ENST00000559849	OR52W1	Q6IF63	320 aa		11.13	□□□□□ -0.63
CHRNB4-204	ENST00000559849	HEPN1	Q6WQI6	88 aa		11.13	□□□□□ -0.63
CHRNB4-204	ENST00000559849	LDLRAD3	Q86YD5	345 aa		11.13	□□□□□ -0.63
CHRNB4-204	ENST00000559849	TMEM86B	Q8N661	226 aa		11.13	□□□□□ -0.63
CHRNB4-204	ENST00000559849	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	11.13	□□□□□ -0.63
CHRNB4-204	ENST00000559849	OR11H6	Q8NGC7	330 aa		11.13	□□□□□ -0.63
CHRNB4-204	ENST00000559849	PLPPR1	Q8TBJ4	325 aa		11.13	□□□□□ -0.63
CHRNB4-204	ENST00000559849	FAM46B	Q96A09	425 aa		11.13	□□□□□ -0.63
CHRNB4-204	ENST00000559849		Q96M66	194 aa		11.13	□□□□□ -0.63
CHRNB4-204	ENST00000559849	DCUN1D5	Q9BTE7	237 aa		11.13	□□□□□ -0.63
CHRNB4-204	ENST00000559849	POMT1	Q9Y6A1	747 aa		11.13	□□□□□ -0.63
CHRNB4-204	ENST00000559849	SESN1	Q9Y6P5	492 aa		11.13	□□□□□ -0.63
CHRNB4-204	ENST00000559849	TRAV1-2	A0A0B4J238	106 aa		11.13	□□□□□ -0.63
CHRNB4-204	ENST00000559849	ZNF729	A6NN14	1252 aa	Predicted RBP	11.13	□□□□□ -0.63
CHRNB4-204	ENST00000559849	MCRIP1	C9JLW8	97 aa		11.13	□□□□□ -0.63
CHRNB4-204	ENST00000559849	SLC17A2	O00624	439 aa		11.13	□□□□□ -0.63
CHRNB4-204	ENST00000559849	CDK2	P24941	298 aa		11.13	□□□□□ -0.63
CHRNB4-204	ENST00000559849	EIF2B2	P49770	351 aa	Known RBP	11.13	□□□□□ -0.63
CHRNB4-204	ENST00000559849	SLC35E4	Q6ICL7	350 aa		11.13	□□□□□ -0.63
CHRNB4-204	ENST00000559849	LINC00299	Q6ZSB3	139 aa		11.13	□□□□□ -0.63
CHRNB4-204	ENST00000559849	NEK7	Q8TDX7	302 aa		11.13	□□□□□ -0.63
CHRNB4-204	ENST00000559849	GFI1	Q99684	422 aa		11.13	□□□□□ -0.63
CHRNB4-204	ENST00000559849	BCL7B	Q9BQE9	202 aa		11.13	□□□□□ -0.63
CHRNB4-204	ENST00000559849	TMEM133	Q9H2Q1	129 aa		11.13	□□□□□ -0.63
CHRNB4-204	ENST00000559849	DPAGT1	Q9H3H5	408 aa		11.13	□□□□□ -0.63
CHRNB4-204	ENST00000559849	RCC2	Q9P258	522 aa	Known RBP	11.13	□□□□□ -0.63
CHRNB4-204	ENST00000559849	PEX16	Q9Y5Y5	336 aa		11.13	□□□□□ -0.63
CHRNB4-204	ENST00000559849		V9GY05	133 aa		11.13	□□□□□ -0.63
CHRNB4-204	ENST00000559849	TENM1	Q9UKZ4	2725 aa		11.12	□□□□□ -0.63
CHRNB4-204	ENST00000559849	PDCD5	O14737	125 aa		11.12	□□□□□ -0.63
CHRNB4-204	ENST00000559849	BPNT1	O95861	308 aa		11.12	□□□□□ -0.63
CHRNB4-204	ENST00000559849	MPIG6B	O95866	241 aa		11.12	□□□□□ -0.63
CHRNB4-204	ENST00000559849	GLA	P06280	429 aa		11.12	□□□□□ -0.63
CHRNB4-204	ENST00000559849	ARSB	P15848	533 aa		11.12	□□□□□ -0.63
CHRNB4-204	ENST00000559849	FUT3	P21217	361 aa		11.12	□□□□□ -0.63
CHRNB4-204	ENST00000559849	IER3	P46695	156 aa		11.12	□□□□□ -0.63
CHRNB4-204	ENST00000559849	RAB12	Q6IQ22	244 aa		11.12	□□□□□ -0.63
CHRNB4-204	ENST00000559849	BRICD5	Q6PL45	260 aa		11.12	□□□□□ -0.63

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