RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 TTTY10Q9BZA0 68 aa4.65□□□□□ -1.67
USP3-215ENST00000559771 NPFFR1Q9GZQ6 430 aa4.65□□□□□ -1.67
USP3-215ENST00000559771 PBOV1Q9GZY1 135 aa4.65□□□□□ -1.67
USP3-215ENST00000559771 FAM234AQ9H0X4 552 aa4.65□□□□□ -1.67
USP3-215ENST00000559771 EXOSC4Q9NPD3 245 aaKnown RBP4.65□□□□□ -1.67
USP3-215ENST00000559771 TXNL4BQ9NX01 149 aaKnown RBP4.65□□□□□ -1.67
USP3-215ENST00000559771 RHBDL2Q9NX52 303 aa4.65□□□□□ -1.67
USP3-215ENST00000559771 ERVK13-1Q9NX77 482 aa4.65□□□□□ -1.67
USP3-215ENST00000559771 NUFIP1Q9UHK0 495 aaKnown RBP4.65□□□□□ -1.67
USP3-215ENST00000559771 CLEC2DQ9UHP7 191 aa4.65□□□□□ -1.67
USP3-215ENST00000559771 PIGLQ9Y2B2 252 aa4.65□□□□□ -1.67
USP3-215ENST00000559771 V9GYS6 101 aa4.65□□□□□ -1.67
USP3-215ENST00000559771 IGKV1-27A0A075B6S5 117 aa4.64□□□□□ -1.67
USP3-215ENST00000559771 TMEM82A0PJX8 343 aa4.64□□□□□ -1.67
USP3-215ENST00000559771 A6NIN4 97 aa4.64□□□□□ -1.67
USP3-215ENST00000559771 ACOD1A6NK06 481 aa4.64□□□□□ -1.67
USP3-215ENST00000559771 FAM90A22PA8MWA6 464 aa4.64□□□□□ -1.67
USP3-215ENST00000559771 J3QT63 122 aa4.64□□□□□ -1.67
USP3-215ENST00000559771 K7EIL1 84 aa4.64□□□□□ -1.67
USP3-215ENST00000559771 K7N7A8 449 aa4.64□□□□□ -1.67
USP3-215ENST00000559771 MAGEB3O15480 346 aa4.64□□□□□ -1.67
USP3-215ENST00000559771 MMP23AO75900 390 aa4.64□□□□□ -1.67
USP3-215ENST00000559771 DHRS3O75911 302 aa4.64□□□□□ -1.67
USP3-215ENST00000559771 SERPINA3P01011 423 aa4.64□□□□□ -1.67
USP3-215ENST00000559771 NRASP01111 189 aa4.64□□□□□ -1.67
USP3-215ENST00000559771 MRPL3P09001 348 aaKnown RBP4.64□□□□□ -1.67
USP3-215ENST00000559771 LIMS3P0CW19 117 aa4.64□□□□□ -1.67
USP3-215ENST00000559771 LIMS4P0CW20 117 aa4.64□□□□□ -1.67
USP3-215ENST00000559771 TRAPPC2P0DI81 140 aa4.64□□□□□ -1.67
USP3-215ENST00000559771 TRAPPC2BP0DI82 140 aa4.64□□□□□ -1.67
USP3-215ENST00000559771 ZNF20P17024 532 aa4.64□□□□□ -1.67
USP3-215ENST00000559771 ATP6V1E1P36543 226 aa4.64□□□□□ -1.67
USP3-215ENST00000559771 HAAOP46952 286 aa4.64□□□□□ -1.67
USP3-215ENST00000559771 MTNR1BP49286 362 aa4.64□□□□□ -1.67
USP3-215ENST00000559771 PSMD7P51665 324 aa4.64□□□□□ -1.67
USP3-215ENST00000559771 DYNLT3P51808 116 aa4.64□□□□□ -1.67
USP3-215ENST00000559771 LOXL3P58215 753 aa4.64□□□□□ -1.67
USP3-215ENST00000559771 ACTA2P62736 377 aa4.64□□□□□ -1.67
USP3-215ENST00000559771 PPP3R1P63098 170 aa4.64□□□□□ -1.67
USP3-215ENST00000559771 ACTG2P63267 376 aa4.64□□□□□ -1.67
USP3-215ENST00000559771 CD83Q01151 205 aa4.64□□□□□ -1.67
USP3-215ENST00000559771 IFITM3Q01628 133 aa4.64□□□□□ -1.67
USP3-215ENST00000559771 RIPPLY1Q0D2K3 151 aa4.64□□□□□ -1.67
USP3-215ENST00000559771 MRPL28Q13084 256 aaKnown RBP4.64□□□□□ -1.67
USP3-215ENST00000559771 GALEQ14376 348 aa4.64□□□□□ -1.67
USP3-215ENST00000559771 CNN3Q15417 329 aaKnown RBP4.64□□□□□ -1.67
USP3-215ENST00000559771 SSX2Q16385 188 aa4.64□□□□□ -1.67
USP3-215ENST00000559771 SMIM21Q3B7S5 101 aa4.64□□□□□ -1.67
USP3-215ENST00000559771 LCN1P1Q5VSP4 162 aa4.64□□□□□ -1.67
USP3-215ENST00000559771 HACD4Q5VWC8 232 aa4.64□□□□□ -1.67
USP3-215ENST00000559771 LIPKQ5VXJ0 399 aa4.64□□□□□ -1.67
USP3-215ENST00000559771 PLCXD3Q63HM9 321 aa4.64□□□□□ -1.67
USP3-215ENST00000559771 STEAP3Q658P3 488 aa4.64□□□□□ -1.67
USP3-215ENST00000559771 ZNF626Q68DY1 528 aa4.64□□□□□ -1.67
USP3-215ENST00000559771 DEGS2Q6QHC5 323 aa4.64□□□□□ -1.67
USP3-215ENST00000559771 ZNF322Q6U7Q0 402 aaPredicted RBP4.64□□□□□ -1.67
USP3-215ENST00000559771 BAIAP2L2Q6UXY1 529 aa4.64□□□□□ -1.67
USP3-215ENST00000559771 BCDIN3DQ7Z5W3 292 aaKnown RBP4.64□□□□□ -1.67
USP3-215ENST00000559771 KRT77Q7Z794 578 aa4.64□□□□□ -1.67
USP3-215ENST00000559771 ANGPTL5Q86XS5 388 aa4.64□□□□□ -1.67
USP3-215ENST00000559771 NDUFA11Q86Y39 141 aa4.64□□□□□ -1.67
USP3-215ENST00000559771 ZNF679Q8IYX0 411 aa4.64□□□□□ -1.67
USP3-215ENST00000559771 MS4A15Q8N5U1 240 aa4.64□□□□□ -1.67
USP3-215ENST00000559771 POC5Q8NA72 575 aa4.64□□□□□ -1.67
USP3-215ENST00000559771 ZBTB8BQ8NAP8 495 aaPredicted RBP4.64□□□□□ -1.67
USP3-215ENST00000559771 OR14K1Q8NGZ2 314 aa4.64□□□□□ -1.67
USP3-215ENST00000559771 OR2T27Q8NH04 317 aa4.64□□□□□ -1.67
USP3-215ENST00000559771 MRAPQ8TCY5 172 aa4.64□□□□□ -1.67
USP3-215ENST00000559771 MALSU1Q96EH3 234 aa4.64□□□□□ -1.67
USP3-215ENST00000559771 HIST1H2AAQ96QV6 131 aa4.64□□□□□ -1.67
USP3-215ENST00000559771 NKX3-1Q99801 234 aaPredicted RBP4.64□□□□□ -1.67
USP3-215ENST00000559771 ZNF649Q9BS31 505 aa4.64□□□□□ -1.67
USP3-215ENST00000559771 HEXA-AS1Q9H8Q6 139 aa4.64□□□□□ -1.67
USP3-215ENST00000559771 RAB18Q9NP72 206 aa4.64□□□□□ -1.67
USP3-215ENST00000559771 ABCB10Q9NRK6 738 aa4.64□□□□□ -1.67
USP3-215ENST00000559771 GPR173Q9NS66 373 aa4.64□□□□□ -1.67
USP3-215ENST00000559771 NECAP2Q9NVZ3 263 aa4.64□□□□□ -1.67
USP3-215ENST00000559771 BABAM2Q9NXR7 383 aa4.64□□□□□ -1.67
USP3-215ENST00000559771 MTCH1Q9NZJ7 389 aa4.64□□□□□ -1.67
USP3-215ENST00000559771 IL36RNQ9UBH0 155 aa4.64□□□□□ -1.67
USP3-215ENST00000559771 LAMP5Q9UJQ1 280 aa4.64□□□□□ -1.67
USP3-215ENST00000559771 PAIP2BQ9ULR5 123 aaKnown RBP4.64□□□□□ -1.67
USP3-215ENST00000559771 TMA7Q9Y2S6 64 aaKnown RBP4.64□□□□□ -1.67
USP3-215ENST00000559771 FABP12A6NFH5 140 aa4.63□□□□□ -1.67
USP3-215ENST00000559771 M0R129 80 aa4.63□□□□□ -1.67
USP3-215ENST00000559771 RGS5O15539 181 aa4.63□□□□□ -1.67
USP3-215ENST00000559771 ZNF254O75437 659 aa4.63□□□□□ -1.67
USP3-215ENST00000559771 TPPPO94811 219 aa4.63□□□□□ -1.67
USP3-215ENST00000559771 CDRT1O95170 752 aa4.63□□□□□ -1.67
USP3-215ENST00000559771 HLA-DQB1P01920 261 aa4.63□□□□□ -1.67
USP3-215ENST00000559771 RBP4P02753 201 aa4.63□□□□□ -1.67
USP3-215ENST00000559771 AMY1AP04745 511 aa4.63□□□□□ -1.67
USP3-215ENST00000559771 AMY2AP04746 511 aa4.63□□□□□ -1.67
USP3-215ENST00000559771 ARG1P05089 322 aa4.63□□□□□ -1.67
USP3-215ENST00000559771 OR2T7P0C7T2 308 aa4.63□□□□□ -1.67
USP3-215ENST00000559771 IGHV1-8P0DP01 117 aa4.63□□□□□ -1.67
USP3-215ENST00000559771 IGLL1P15814 213 aa4.63□□□□□ -1.67
USP3-215ENST00000559771 CCL1P22362 96 aa4.63□□□□□ -1.67
USP3-215ENST00000559771 CAPZA1P52907 286 aa4.63□□□□□ -1.67
USP3-215ENST00000559771 KRTAP10-11P60412 298 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms