RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 KCNIP4Q6PIL6 250 aa9.24□□□□□ -0.93
CARMIL3-202ENST00000559694 DTX1Q86Y01 620 aa9.24□□□□□ -0.93
CARMIL3-202ENST00000559694 ZNF808Q8N4W9 903 aaPredicted RBP9.24□□□□□ -0.93
CARMIL3-202ENST00000559694 SAT2Q96F10 170 aaPredicted RBP9.24□□□□□ -0.93
CARMIL3-202ENST00000559694 KLHDC3Q9BQ90 382 aa9.24□□□□□ -0.93
CARMIL3-202ENST00000559694 ST6GALNAC2Q9UJ37 374 aa9.24□□□□□ -0.93
CARMIL3-202ENST00000559694 MED19A0JLT2 244 aaPredicted RBP9.24□□□□□ -0.93
CARMIL3-202ENST00000559694 C7orf77A4D0Y5 90 aa9.24□□□□□ -0.93
CARMIL3-202ENST00000559694 K7ENP7 123 aa9.24□□□□□ -0.93
CARMIL3-202ENST00000559694 ECI1P42126 302 aa9.24□□□□□ -0.93
CARMIL3-202ENST00000559694 ZP1P60852 638 aa9.24□□□□□ -0.93
CARMIL3-202ENST00000559694 RPS4XP62701 263 aaKnown RBP9.24□□□□□ -0.93
CARMIL3-202ENST00000559694 FNDC7Q5VTL7 733 aa9.24□□□□□ -0.93
CARMIL3-202ENST00000559694 MYOZ1Q9NP98 299 aaPredicted RBP9.24□□□□□ -0.93
CARMIL3-202ENST00000559694 SLC39A9Q9NUM3 307 aa9.24□□□□□ -0.93
CARMIL3-202ENST00000559694 LPAR3Q9UBY5 353 aa9.24□□□□□ -0.93
CARMIL3-202ENST00000559694 TNFSF18Q9UNG2 199 aa9.24□□□□□ -0.93
CARMIL3-202ENST00000559694 CLDN16Q9Y5I7 305 aa9.24□□□□□ -0.93
CARMIL3-202ENST00000559694 CADP27708 2225 aa9.24□□□□□ -0.93
CARMIL3-202ENST00000559694 TRAV8-7A0A075B6U6 113 aa9.24□□□□□ -0.93
CARMIL3-202ENST00000559694 TRGV10A0A0A0MS01 117 aa9.24□□□□□ -0.93
CARMIL3-202ENST00000559694 KCNAB3O43448 404 aa9.24□□□□□ -0.93
CARMIL3-202ENST00000559694 TTRP02766 147 aa9.24□□□□□ -0.93
CARMIL3-202ENST00000559694 CTXN2P0C2S0 81 aa9.24□□□□□ -0.93
CARMIL3-202ENST00000559694 HOXB1P14653 301 aaPredicted RBP9.24□□□□□ -0.93
CARMIL3-202ENST00000559694 NKX2-1P43699 371 aaPredicted RBP9.24□□□□□ -0.93
CARMIL3-202ENST00000559694 NANOS3P60323 173 aaKnown RBP9.24□□□□□ -0.93
CARMIL3-202ENST00000559694 TMEM41BQ5BJD5 291 aa9.24□□□□□ -0.93
CARMIL3-202ENST00000559694 SLC25A53Q5H9E4 307 aa9.24□□□□□ -0.93
CARMIL3-202ENST00000559694 SSX8Q7RTT4 187 aa9.24□□□□□ -0.93
CARMIL3-202ENST00000559694 LDLRAD3Q86YD5 345 aa9.24□□□□□ -0.93
CARMIL3-202ENST00000559694 ARHGEF39Q8N4T4 335 aa9.24□□□□□ -0.93
CARMIL3-202ENST00000559694 ARRDC1Q8N5I2 433 aa9.24□□□□□ -0.93
CARMIL3-202ENST00000559694 OR10X1Q8NGY0 326 aa9.24□□□□□ -0.93
CARMIL3-202ENST00000559694 SEH1LQ96EE3 360 aa9.24□□□□□ -0.93
CARMIL3-202ENST00000559694 ZNF426Q9BUY5 554 aa9.24□□□□□ -0.93
CARMIL3-202ENST00000559694 GP6Q9HCN6 339 aa9.24□□□□□ -0.93
CARMIL3-202ENST00000559694 TIMM8BQ9Y5J9 83 aaPredicted RBP9.24□□□□□ -0.93
CARMIL3-202ENST00000559694 SNRNP200O75643 2136 aaKnown RBP9.24□□□□□ -0.93
CARMIL3-202ENST00000559694 IGLV3-32A0A0A0MS00 114 aa9.24□□□□□ -0.93
CARMIL3-202ENST00000559694 RNF212BA8MTL3 300 aa9.24□□□□□ -0.93
CARMIL3-202ENST00000559694 RAB27BO00194 218 aa9.24□□□□□ -0.93
CARMIL3-202ENST00000559694 HSD17B6O14756 317 aa9.24□□□□□ -0.93
CARMIL3-202ENST00000559694 NGFP01138 241 aa9.24□□□□□ -0.93
CARMIL3-202ENST00000559694 NPBWR1P48145 328 aa9.24□□□□□ -0.93
CARMIL3-202ENST00000559694 ZNF92Q03936 586 aa9.24□□□□□ -0.93
CARMIL3-202ENST00000559694 PRSS54Q6PEW0 395 aa9.24□□□□□ -0.93
CARMIL3-202ENST00000559694 RBMS3Q6XE24 437 aaKnown RBP9.24□□□□□ -0.93
CARMIL3-202ENST00000559694 TLNRD1Q9H1K6 362 aa9.24□□□□□ -0.93
CARMIL3-202ENST00000559694 C19orf12Q9NSK7 152 aa9.24□□□□□ -0.93
CARMIL3-202ENST00000559694 RNF150Q9ULK6 438 aa9.24□□□□□ -0.93
CARMIL3-202ENST00000559694 CLEC12BQ2HXU8 276 aa9.23□□□□□ -0.93
CARMIL3-202ENST00000559694 SDSLQ96GA7 329 aa9.23□□□□□ -0.93
CARMIL3-202ENST00000559694 SPRR3Q9UBC9 169 aa9.23□□□□□ -0.93
CARMIL3-202ENST00000559694 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.23□□□□□ -0.93
CARMIL3-202ENST00000559694 TMPRSS2O15393 492 aa9.23□□□□□ -0.93
CARMIL3-202ENST00000559694 EFNA2O43921 213 aa9.23□□□□□ -0.93
CARMIL3-202ENST00000559694 OR5H8P0DN80 308 aa9.23□□□□□ -0.93
CARMIL3-202ENST00000559694 EFNB2P52799 333 aa9.23□□□□□ -0.93
CARMIL3-202ENST00000559694 NSUN5P2Q63ZY6 315 aa9.23□□□□□ -0.93
CARMIL3-202ENST00000559694 NECAP1Q8NC96 275 aa9.23□□□□□ -0.93
CARMIL3-202ENST00000559694 ZNF837Q96EG3 531 aaPredicted RBP9.23□□□□□ -0.93
CARMIL3-202ENST00000559694 ADAT3Q96EY9 351 aaPredicted RBP9.23□□□□□ -0.93
CARMIL3-202ENST00000559694 FAAP24Q9BTP7 215 aa9.23□□□□□ -0.93
CARMIL3-202ENST00000559694 SLC35B3Q9H1N7 401 aa9.23□□□□□ -0.93
CARMIL3-202ENST00000559694 RIMS4Q9H426 269 aaPredicted RBP9.23□□□□□ -0.93
CARMIL3-202ENST00000559694 RAB18Q9NP72 206 aa9.23□□□□□ -0.93
CARMIL3-202ENST00000559694 BTBD17A6NE02 478 aa9.23□□□□□ -0.93
CARMIL3-202ENST00000559694 A8MXK9 166 aa9.23□□□□□ -0.93
CARMIL3-202ENST00000559694 H7BYZ3 331 aa9.23□□□□□ -0.93
CARMIL3-202ENST00000559694 CLPSP04118 112 aa9.23□□□□□ -0.93
CARMIL3-202ENST00000559694 RAB5AP20339 215 aa9.23□□□□□ -0.93
CARMIL3-202ENST00000559694 SSTP61278 116 aa9.23□□□□□ -0.93
CARMIL3-202ENST00000559694 SRPXP78539 464 aa9.23□□□□□ -0.93
CARMIL3-202ENST00000559694 MSMO1Q15800 293 aa9.23□□□□□ -0.93
CARMIL3-202ENST00000559694 LCN15Q6UWW0 184 aa9.23□□□□□ -0.93
CARMIL3-202ENST00000559694 LINC00114Q6XXX2 140 aa9.23□□□□□ -0.93
CARMIL3-202ENST00000559694 COMMD1Q8N668 190 aa9.23□□□□□ -0.93
CARMIL3-202ENST00000559694 SGK3Q96BR1 496 aa9.23□□□□□ -0.93
CARMIL3-202ENST00000559694 PGLYRP3Q96LB9 341 aa9.23□□□□□ -0.93
CARMIL3-202ENST00000559694 AP1S3Q96PC3 154 aa9.23□□□□□ -0.93
CARMIL3-202ENST00000559694 KLF4O43474 513 aa9.22□□□□□ -0.93
CARMIL3-202ENST00000559694 ONECUT2O95948 504 aa9.22□□□□□ -0.93
CARMIL3-202ENST00000559694 PNPP00491 289 aa9.22□□□□□ -0.93
CARMIL3-202ENST00000559694 SNCAP37840 140 aa9.22□□□□□ -0.93
CARMIL3-202ENST00000559694 H3F3AP84243 136 aa9.22□□□□□ -0.93
CARMIL3-202ENST00000559694 FOXO1Q12778 655 aa9.22□□□□□ -0.93
CARMIL3-202ENST00000559694 C6orf201Q7Z4U5 140 aa9.22□□□□□ -0.93
CARMIL3-202ENST00000559694 ADAMTS17Q8TE56 1095 aa9.22□□□□□ -0.93
CARMIL3-202ENST00000559694 ARHGAP5-AS1Q96IT6 56 aa9.22□□□□□ -0.93
CARMIL3-202ENST00000559694 LAMP3Q9UQV4 416 aa9.22□□□□□ -0.93
CARMIL3-202ENST00000559694 IGKV1D-43A0A0B4J1Z2 117 aa9.22□□□□□ -0.93
CARMIL3-202ENST00000559694 NPIPB13A6NJU9 1138 aa9.22□□□□□ -0.93
CARMIL3-202ENST00000559694 ZNF727A8MUV8 499 aa9.22□□□□□ -0.93
CARMIL3-202ENST00000559694 NPIPB4C9JG80 1138 aa9.22□□□□□ -0.93
CARMIL3-202ENST00000559694 MST1P26927 711 aa9.22□□□□□ -0.93
CARMIL3-202ENST00000559694 GGTLC2Q14390 218 aa9.22□□□□□ -0.93
CARMIL3-202ENST00000559694 ZNF345Q14585 488 aa9.22□□□□□ -0.93
CARMIL3-202ENST00000559694 OR2B11Q5JQS5 317 aa9.22□□□□□ -0.93
CARMIL3-202ENST00000559694 LINC01590Q5TEZ4 76 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 128.1 ms