RNA–Protein interactions for RNA: ENST00000559207.1

CPNE6-212, Transcript of copine 6, humanhuman

TSL 3

Gene CPNE6, Length 570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-212ENST00000559207 SOX2P48431 317 aa9.18□□□□□ -0.94
CPNE6-212ENST00000559207 GTF2A1P52655 376 aaPredicted RBP9.18□□□□□ -0.94
CPNE6-212ENST00000559207 GBX2P52951 348 aaPredicted RBP9.18□□□□□ -0.94
CPNE6-212ENST00000559207 MRPL28Q13084 256 aaKnown RBP9.18□□□□□ -0.94
CPNE6-212ENST00000559207 MADCAM1Q13477 382 aa9.18□□□□□ -0.94
CPNE6-212ENST00000559207 HNF4GQ14541 408 aa9.18□□□□□ -0.94
CPNE6-212ENST00000559207 IL13RA2Q14627 380 aa9.18□□□□□ -0.94
CPNE6-212ENST00000559207 PIGYQ3MUY2 71 aa9.18□□□□□ -0.94
CPNE6-212ENST00000559207 ASCL4Q6XD76 172 aa9.18□□□□□ -0.94
CPNE6-212ENST00000559207 ETV3LQ6ZN32 361 aa9.18□□□□□ -0.94
CPNE6-212ENST00000559207 C5orf56Q8N8D9 126 aa9.18□□□□□ -0.94
CPNE6-212ENST00000559207 Q8NFD4 153 aa9.18□□□□□ -0.94
CPNE6-212ENST00000559207 OR52I1Q8NGK6 324 aa9.18□□□□□ -0.94
CPNE6-212ENST00000559207 TNFAIP8L1Q8WVP5 186 aa9.18□□□□□ -0.94
CPNE6-212ENST00000559207 TSEN15Q8WW01 171 aaKnown RBP9.18□□□□□ -0.94
CPNE6-212ENST00000559207 RGP1Q92546 391 aaPredicted RBP9.18□□□□□ -0.94
CPNE6-212ENST00000559207 Q96MT0 163 aa9.18□□□□□ -0.94
CPNE6-212ENST00000559207 NOL4LQ96MY1 436 aaPredicted RBP9.18□□□□□ -0.94
CPNE6-212ENST00000559207 MYCBPQ99417 103 aaPredicted RBP9.18□□□□□ -0.94
CPNE6-212ENST00000559207 PCDHB16Q9NRJ7 776 aa9.18□□□□□ -0.94
CPNE6-212ENST00000559207 MRPS18AQ9NVS2 196 aaKnown RBP9.18□□□□□ -0.94
CPNE6-212ENST00000559207 TAS2R4Q9NYW5 299 aa9.18□□□□□ -0.94
CPNE6-212ENST00000559207 A0A1W2PPE3 182 aa9.17□□□□□ -0.94
CPNE6-212ENST00000559207 MAGEB3O15480 346 aa9.17□□□□□ -0.94
CPNE6-212ENST00000559207 MPZL2O60487 215 aa9.17□□□□□ -0.94
CPNE6-212ENST00000559207 CDRT1O95170 752 aa9.17□□□□□ -0.94
CPNE6-212ENST00000559207 HTR3BO95264 441 aa9.17□□□□□ -0.94
CPNE6-212ENST00000559207 CLIC3O95833 236 aa9.17□□□□□ -0.94
CPNE6-212ENST00000559207 LIMS3P0CW19 117 aa9.17□□□□□ -0.94
CPNE6-212ENST00000559207 LIMS4P0CW20 117 aa9.17□□□□□ -0.94
CPNE6-212ENST00000559207 TMEM11P17152 192 aa9.17□□□□□ -0.94
CPNE6-212ENST00000559207 HOXD3P31249 432 aaPredicted RBP9.17□□□□□ -0.94
CPNE6-212ENST00000559207 SSTR5P35346 364 aa9.17□□□□□ -0.94
CPNE6-212ENST00000559207 GNG10P50151 68 aa9.17□□□□□ -0.94
CPNE6-212ENST00000559207 PAX5Q02548 391 aa9.17□□□□□ -0.94
CPNE6-212ENST00000559207 EGFEM1PQ0D2K5 195 aa9.17□□□□□ -0.94
CPNE6-212ENST00000559207 RAB40BQ12829 278 aa9.17□□□□□ -0.94
CPNE6-212ENST00000559207 HES1Q14469 280 aa9.17□□□□□ -0.94
CPNE6-212ENST00000559207 RSU1Q15404 277 aa9.17□□□□□ -0.94
CPNE6-212ENST00000559207 DEFB121Q5J5C9 76 aa9.17□□□□□ -0.94
CPNE6-212ENST00000559207 XAF1Q6GPH4 301 aa9.17□□□□□ -0.94
CPNE6-212ENST00000559207 C18orf65Q6ZTR6 163 aa9.17□□□□□ -0.94
CPNE6-212ENST00000559207 MRPL41Q8IXM3 137 aaKnown RBP9.17□□□□□ -0.94
CPNE6-212ENST00000559207 HAVCR2Q8TDQ0 301 aa9.17□□□□□ -0.94
CPNE6-212ENST00000559207 GPER1Q99527 375 aa9.17□□□□□ -0.94
CPNE6-212ENST00000559207 SLC29A1Q99808 456 aa9.17□□□□□ -0.94
CPNE6-212ENST00000559207 FAM192AQ9GZU8 254 aa9.17□□□□□ -0.94
CPNE6-212ENST00000559207 LINC00527Q9UJ94 153 aa9.17□□□□□ -0.94
CPNE6-212ENST00000559207 LINC01548A6NM66 108 aa9.16□□□□□ -0.94
CPNE6-212ENST00000559207 IGKV1D-33P01593 117 aa9.16□□□□□ -0.94
CPNE6-212ENST00000559207 IGKV1-33P01594 117 aa9.16□□□□□ -0.94
CPNE6-212ENST00000559207 KCNJ3P48549 501 aa9.16□□□□□ -0.94
CPNE6-212ENST00000559207 THBS3P49746 956 aa9.16□□□□□ -0.94
CPNE6-212ENST00000559207 RAB7AP51149 207 aa9.16□□□□□ -0.94
CPNE6-212ENST00000559207 RPL23AP62750 156 aaKnown RBP9.16□□□□□ -0.94
CPNE6-212ENST00000559207 VAX1Q5SQQ9 334 aa9.16□□□□□ -0.94
CPNE6-212ENST00000559207 ZFP1Q6P2D0 407 aa9.16□□□□□ -0.94
CPNE6-212ENST00000559207 SLC16A12Q6ZSM3 486 aa9.16□□□□□ -0.94
CPNE6-212ENST00000559207 OR2W3Q7Z3T1 314 aa9.16□□□□□ -0.94
CPNE6-212ENST00000559207 OR8H3Q8N146 312 aa9.16□□□□□ -0.94
CPNE6-212ENST00000559207 SUMF2Q8NBJ7 301 aa9.16□□□□□ -0.94
CPNE6-212ENST00000559207 OR10A7Q8NGE5 316 aa9.16□□□□□ -0.94
CPNE6-212ENST00000559207 GPR148Q8TDV2 347 aa9.16□□□□□ -0.94
CPNE6-212ENST00000559207 APH1BQ8WW43 257 aa9.16□□□□□ -0.94
CPNE6-212ENST00000559207 CPNE2Q96FN4 548 aaPredicted RBP9.16□□□□□ -0.94
CPNE6-212ENST00000559207 DPCDQ9BVM2 203 aaPredicted RBP9.16□□□□□ -0.94
CPNE6-212ENST00000559207 JAM3Q9BX67 310 aa9.16□□□□□ -0.94
CPNE6-212ENST00000559207 ING4Q9UNL4 249 aa9.16□□□□□ -0.94
CPNE6-212ENST00000559207 ST3GAL6Q9Y274 331 aa9.16□□□□□ -0.94
CPNE6-212ENST00000559207 RPL36Q9Y3U8 105 aaKnown RBP9.16□□□□□ -0.94
CPNE6-212ENST00000559207 DNAH9Q9NYC9 4486 aa9.16□□□□□ -0.94
CPNE6-212ENST00000559207 TENM3Q9P273 2699 aa9.16□□□□□ -0.94
CPNE6-212ENST00000559207 LOC100130705A0A1B0GUX0 176 aa9.15□□□□□ -0.94
CPNE6-212ENST00000559207 SERPINE3A8MV23 424 aa9.15□□□□□ -0.94
CPNE6-212ENST00000559207 FGF16O43320 207 aa9.15□□□□□ -0.94
CPNE6-212ENST00000559207 IGHG2P01859 326 aa9.15□□□□□ -0.94
CPNE6-212ENST00000559207 GZMHP20718 246 aa9.15□□□□□ -0.94
CPNE6-212ENST00000559207 REG1BP48304 166 aa9.15□□□□□ -0.94
CPNE6-212ENST00000559207 EBI3Q14213 229 aa9.15□□□□□ -0.94
CPNE6-212ENST00000559207 SMN1Q16637 294 aaKnown RBP9.15□□□□□ -0.94
CPNE6-212ENST00000559207 KLHL22Q53GT1 634 aa9.15□□□□□ -0.94
CPNE6-212ENST00000559207 NHLRC3Q5JS37 347 aa9.15□□□□□ -0.94
CPNE6-212ENST00000559207 FAM53AQ6NSI3 398 aaPredicted RBP9.15□□□□□ -0.94
CPNE6-212ENST00000559207 C11orf87Q6NUJ2 197 aa9.15□□□□□ -0.94
CPNE6-212ENST00000559207 C8orf86Q6ZUL3 223 aa9.15□□□□□ -0.94
CPNE6-212ENST00000559207 OR51D1Q8NGF3 324 aa9.15□□□□□ -0.94
CPNE6-212ENST00000559207 OR10X1Q8NGY0 326 aa9.15□□□□□ -0.94
CPNE6-212ENST00000559207 CHPT1Q8WUD6 406 aa9.15□□□□□ -0.94
CPNE6-212ENST00000559207 C9orf16Q9BUW7 83 aa9.15□□□□□ -0.94
CPNE6-212ENST00000559207 IFT22Q9H7X7 185 aa9.15□□□□□ -0.94
CPNE6-212ENST00000559207 FGF20Q9NP95 211 aaPredicted RBP9.15□□□□□ -0.94
CPNE6-212ENST00000559207 TMEM138Q9NPI0 162 aa9.15□□□□□ -0.94
CPNE6-212ENST00000559207 FAM118AQ9NWS6 357 aa9.15□□□□□ -0.94
CPNE6-212ENST00000559207 SIRT4Q9Y6E7 314 aaPredicted RBP9.15□□□□□ -0.94
CPNE6-212ENST00000559207 IGHV3-72A0A0B4J1Y9 119 aa9.14□□□□□ -0.95
CPNE6-212ENST00000559207 IGHV1-3A0A0C4DH29 117 aa9.14□□□□□ -0.95
CPNE6-212ENST00000559207 C15orf65H3BRN8 121 aa9.14□□□□□ -0.95
CPNE6-212ENST00000559207 CCRL2O00421 344 aa9.14□□□□□ -0.95
CPNE6-212ENST00000559207 HSD17B6O14756 317 aa9.14□□□□□ -0.95
CPNE6-212ENST00000559207 GEMIN2O14893 280 aaKnown RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms