RNA–Protein interactions for RNA: ENST00000559119.1

VPS13C-208, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 2

Gene VPS13C, Length 738 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-208ENST00000559119 LY75O60449 1722 aa2.11□□□□□ -2.07
VPS13C-208ENST00000559119 STRCQ7RTU9 1775 aa2.11□□□□□ -2.07
VPS13C-208ENST00000559119 SCN9AQ15858 1988 aa2.11□□□□□ -2.07
VPS13C-208ENST00000559119 OTOFQ9HC10 1997 aa2.11□□□□□ -2.07
VPS13C-208ENST00000559119 TRAV1-2A0A0B4J238 106 aa2.11□□□□□ -2.07
VPS13C-208ENST00000559119 A0A1W2PPE3 182 aa2.11□□□□□ -2.07
VPS13C-208ENST00000559119 ANKRD20A5PA0PJZ0 165 aa2.11□□□□□ -2.07
VPS13C-208ENST00000559119 GGT3PA6NGU5 568 aa2.11□□□□□ -2.07
VPS13C-208ENST00000559119 NCF1BA6NI72 391 aaPredicted RBP2.11□□□□□ -2.07
VPS13C-208ENST00000559119 GABRR3A8MPY1 467 aa2.11□□□□□ -2.07
VPS13C-208ENST00000559119 NCF1CA8MVU1 366 aaPredicted RBP2.11□□□□□ -2.07
VPS13C-208ENST00000559119 IDSB3KWA1 339 aa2.11□□□□□ -2.07
VPS13C-208ENST00000559119 C9JVG2 144 aa2.11□□□□□ -2.07
VPS13C-208ENST00000559119 GABARAPH6UMI1 98 aa2.11□□□□□ -2.07
VPS13C-208ENST00000559119 K7ERQ8 282 aa2.11□□□□□ -2.07
VPS13C-208ENST00000559119 M0QZ92 97 aa2.11□□□□□ -2.07
VPS13C-208ENST00000559119 M0R143 59 aa2.11□□□□□ -2.07
VPS13C-208ENST00000559119 FAAHO00519 579 aa2.11□□□□□ -2.07
VPS13C-208ENST00000559119 GABRPO00591 440 aa2.11□□□□□ -2.07
VPS13C-208ENST00000559119 TP53I11O14683 189 aa2.11□□□□□ -2.07
VPS13C-208ENST00000559119 ARPC5O15511 151 aa2.11□□□□□ -2.07
VPS13C-208ENST00000559119 TBX19O60806 448 aa2.11□□□□□ -2.07
VPS13C-208ENST00000559119 CTNSO60931 367 aa2.11□□□□□ -2.07
VPS13C-208ENST00000559119 CLDN11O75508 207 aa2.11□□□□□ -2.07
VPS13C-208ENST00000559119 STK17BO94768 372 aa2.11□□□□□ -2.07
VPS13C-208ENST00000559119 NDUFB6O95139 128 aa2.11□□□□□ -2.07
VPS13C-208ENST00000559119 GCGP01275 180 aa2.11□□□□□ -2.07
VPS13C-208ENST00000559119 IGF2P01344 180 aa2.11□□□□□ -2.07
VPS13C-208ENST00000559119 PPBPP02775 128 aa2.11□□□□□ -2.07
VPS13C-208ENST00000559119 APODP05090 189 aa2.11□□□□□ -2.07
VPS13C-208ENST00000559119 EIF4EP06730 217 aaKnown RBP2.11□□□□□ -2.07
VPS13C-208ENST00000559119 C8GP07360 202 aa2.11□□□□□ -2.07
VPS13C-208ENST00000559119 CA3P07451 260 aa2.11□□□□□ -2.07
VPS13C-208ENST00000559119 IL3P08700 152 aa2.11□□□□□ -2.07
VPS13C-208ENST00000559119 ZNF35P13682 527 aa2.11□□□□□ -2.07
VPS13C-208ENST00000559119 FUT1P19526 365 aa2.11□□□□□ -2.07
VPS13C-208ENST00000559119 BCKDHBP21953 392 aa2.11□□□□□ -2.07
VPS13C-208ENST00000559119 OTX2P32243 289 aa2.11□□□□□ -2.07
VPS13C-208ENST00000559119 BMI1P35226 326 aa2.11□□□□□ -2.07
VPS13C-208ENST00000559119 CHI3L1P36222 383 aaPredicted RBP2.11□□□□□ -2.07
VPS13C-208ENST00000559119 ARL2P36404 184 aa2.11□□□□□ -2.07
VPS13C-208ENST00000559119 MAP3K8P41279 467 aa2.11□□□□□ -2.07
VPS13C-208ENST00000559119 EMDP50402 254 aa2.11□□□□□ -2.07
VPS13C-208ENST00000559119 IDH3GP51553 393 aaPredicted RBP2.11□□□□□ -2.07
VPS13C-208ENST00000559119 CCR8P51685 355 aa2.11□□□□□ -2.07
VPS13C-208ENST00000559119 TDGF1P3P51864 188 aa2.11□□□□□ -2.07
VPS13C-208ENST00000559119 CDKN2DP55273 166 aa2.11□□□□□ -2.07
VPS13C-208ENST00000559119 CARD18P57730 90 aa2.11□□□□□ -2.07
VPS13C-208ENST00000559119 SMIM11AP58511 58 aa2.11□□□□□ -2.07
VPS13C-208ENST00000559119 OR2B8PP59922 312 aa2.11□□□□□ -2.07
VPS13C-208ENST00000559119 TPI1P60174 286 aa2.11□□□□□ -2.07
VPS13C-208ENST00000559119 RND3P61587 244 aa2.11□□□□□ -2.07
VPS13C-208ENST00000559119 RBX1P62877 108 aa2.11□□□□□ -2.07
VPS13C-208ENST00000559119 CDK5Q00535 292 aa2.11□□□□□ -2.07
VPS13C-208ENST00000559119 ARFRP1Q13795 201 aa2.11□□□□□ -2.07
VPS13C-208ENST00000559119 JOSD1Q15040 202 aaPredicted RBP2.11□□□□□ -2.07
VPS13C-208ENST00000559119 RHEBQ15382 184 aa2.11□□□□□ -2.07
VPS13C-208ENST00000559119 RSU1Q15404 277 aa2.11□□□□□ -2.07
VPS13C-208ENST00000559119 SURF2Q15527 256 aaPredicted RBP2.11□□□□□ -2.07
VPS13C-208ENST00000559119 MAPK14Q16539 360 aa2.11□□□□□ -2.07
VPS13C-208ENST00000559119 SLC25A52Q3SY17 297 aa2.11□□□□□ -2.07
VPS13C-208ENST00000559119 NKAIN1Q4KMZ8 207 aa2.11□□□□□ -2.07
VPS13C-208ENST00000559119 HENMT1Q5T8I9 393 aaKnown RBP2.11□□□□□ -2.07
VPS13C-208ENST00000559119 SYPL2Q5VXT5 272 aa2.11□□□□□ -2.07
VPS13C-208ENST00000559119 FBXW9Q5XUX1 488 aa2.11□□□□□ -2.07
VPS13C-208ENST00000559119 GLT8D1Q68CQ7 371 aa2.11□□□□□ -2.07
VPS13C-208ENST00000559119 OR10K2Q6IF99 312 aa2.11□□□□□ -2.07
VPS13C-208ENST00000559119 ACSM5Q6NUN0 579 aa2.11□□□□□ -2.07
VPS13C-208ENST00000559119 NIPAL3Q6P499 406 aa2.11□□□□□ -2.07
VPS13C-208ENST00000559119 ULK3Q6PHR2 472 aa2.11□□□□□ -2.07
VPS13C-208ENST00000559119 CLEC2AQ6UVW9 174 aa2.11□□□□□ -2.07
VPS13C-208ENST00000559119 CERS6Q6ZMG9 384 aa2.11□□□□□ -2.07
VPS13C-208ENST00000559119 Q6ZPB1 254 aaPredicted RBP2.11□□□□□ -2.07
VPS13C-208ENST00000559119 ACOT7LQ6ZUV0 252 aa2.11□□□□□ -2.07
VPS13C-208ENST00000559119 PAQR9Q6ZVX9 377 aa2.11□□□□□ -2.07
VPS13C-208ENST00000559119 NDUFAF7Q7L592 441 aa2.11□□□□□ -2.07
VPS13C-208ENST00000559119 OR2W3Q7Z3T1 314 aa2.11□□□□□ -2.07
VPS13C-208ENST00000559119 ZNF546Q86UE3 836 aa2.11□□□□□ -2.07
VPS13C-208ENST00000559119 VRK2Q86Y07 508 aa2.11□□□□□ -2.07
VPS13C-208ENST00000559119 GTPBP8Q8N3Z3 284 aaPredicted RBP2.11□□□□□ -2.07
VPS13C-208ENST00000559119 ACBD7Q8N6N7 88 aa2.11□□□□□ -2.07
VPS13C-208ENST00000559119 UBAC2Q8NBM4 344 aa2.11□□□□□ -2.07
VPS13C-208ENST00000559119 OR2D3Q8NGH3 330 aa2.11□□□□□ -2.07
VPS13C-208ENST00000559119 OR4A4PQ8NGN8 299 aa2.11□□□□□ -2.07
VPS13C-208ENST00000559119 OR9A2Q8NGT5 310 aa2.11□□□□□ -2.07
VPS13C-208ENST00000559119 OR51Q1Q8NH59 317 aa2.11□□□□□ -2.07
VPS13C-208ENST00000559119 OR5W2Q8NH69 310 aa2.11□□□□□ -2.07
VPS13C-208ENST00000559119 LYPD6BQ8NI32 183 aa2.11□□□□□ -2.07
VPS13C-208ENST00000559119 UBA3Q8TBC4 463 aa2.11□□□□□ -2.07
VPS13C-208ENST00000559119 PAQR8Q8TEZ7 354 aa2.11□□□□□ -2.07
VPS13C-208ENST00000559119 PIH1D2Q8WWB5 315 aa2.11□□□□□ -2.07
VPS13C-208ENST00000559119 RLN3Q8WXF3 142 aa2.11□□□□□ -2.07
VPS13C-208ENST00000559119 C22orf15Q8WYQ4 148 aa2.11□□□□□ -2.07
VPS13C-208ENST00000559119 S100PBPQ96BU1 408 aa2.11□□□□□ -2.07
VPS13C-208ENST00000559119 GALNT14Q96FL9 552 aa2.11□□□□□ -2.07
VPS13C-208ENST00000559119 CMTM7Q96FZ5 175 aa2.11□□□□□ -2.07
VPS13C-208ENST00000559119 YPEL4Q96NS1 127 aa2.11□□□□□ -2.07
VPS13C-208ENST00000559119 CLCC1Q96S66 551 aa2.11□□□□□ -2.07
VPS13C-208ENST00000559119 STACQ99469 402 aa2.11□□□□□ -2.07
VPS13C-208ENST00000559119 TMEM208Q9BTX3 173 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms