RNA–Protein interactions for RNA: ENST00000558937.1

SMAD6-203, Transcript of SMAD family member 6, humanhuman

TSL 5

Gene SMAD6, Length 632 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-203ENST00000558937 EMX1Q04741 257 aaPredicted RBP12.06□□□□□ -0.48
SMAD6-203ENST00000558937 RIPK1Q13546 671 aa12.06□□□□□ -0.48
SMAD6-203ENST00000558937 LTC4SQ16873 150 aa12.06□□□□□ -0.48
SMAD6-203ENST00000558937 NHLRC3Q5JS37 347 aa12.06□□□□□ -0.48
SMAD6-203ENST00000558937 DMKNQ6E0U4 476 aaPredicted RBP12.06□□□□□ -0.48
SMAD6-203ENST00000558937 CCDC144NLQ6NUI1 221 aa12.06□□□□□ -0.48
SMAD6-203ENST00000558937 OSR2Q8N2R0 312 aa12.06□□□□□ -0.48
SMAD6-203ENST00000558937 DHRSXQ8N5I4 330 aa12.06□□□□□ -0.48
SMAD6-203ENST00000558937 ZNF565Q8N9K5 539 aa12.06□□□□□ -0.48
SMAD6-203ENST00000558937 SUMF2Q8NBJ7 301 aa12.06□□□□□ -0.48
SMAD6-203ENST00000558937 GHSRQ92847 366 aa12.06□□□□□ -0.48
SMAD6-203ENST00000558937 LEAP2Q969E1 77 aa12.06□□□□□ -0.48
SMAD6-203ENST00000558937 TOMM40LQ969M1 308 aa12.06□□□□□ -0.48
SMAD6-203ENST00000558937 RPEQ96AT9 228 aa12.06□□□□□ -0.48
SMAD6-203ENST00000558937 R3HDM4Q96D70 268 aa12.06□□□□□ -0.48
SMAD6-203ENST00000558937 TMEM80Q96HE8 168 aa12.06□□□□□ -0.48
SMAD6-203ENST00000558937 RBM14Q96PK6 669 aaKnown RBP12.06□□□□□ -0.48
SMAD6-203ENST00000558937 DPCDQ9BVM2 203 aaPredicted RBP12.06□□□□□ -0.48
SMAD6-203ENST00000558937 LINC00574Q9H8X3 128 aa12.06□□□□□ -0.48
SMAD6-203ENST00000558937 ST3GAL6Q9Y274 331 aa12.06□□□□□ -0.48
SMAD6-203ENST00000558937 AMMECR1Q9Y4X0 333 aaPredicted RBP12.06□□□□□ -0.48
SMAD6-203ENST00000558937 MAGEA13PA6NCF6 341 aa12.05□□□□□ -0.48
SMAD6-203ENST00000558937 SH2D7A6NKC9 451 aaPredicted RBP12.05□□□□□ -0.48
SMAD6-203ENST00000558937 NPIPB11E5RHQ5 1161 aa12.05□□□□□ -0.48
SMAD6-203ENST00000558937 J3QR06 171 aa12.05□□□□□ -0.48
SMAD6-203ENST00000558937 OR7C1O76099 320 aaPredicted RBP12.05□□□□□ -0.48
SMAD6-203ENST00000558937 CSTBP04080 98 aaKnown RBP12.05□□□□□ -0.48
SMAD6-203ENST00000558937 MNDAP41218 407 aa12.05□□□□□ -0.48
SMAD6-203ENST00000558937 GNG10P50151 68 aa12.05□□□□□ -0.48
SMAD6-203ENST00000558937 RPS11P62280 158 aaKnown RBP eCLIP12.05□□□□□ -0.48
SMAD6-203ENST00000558937 MED21Q13503 144 aa12.05□□□□□ -0.48
SMAD6-203ENST00000558937 RCN1Q15293 331 aa12.05□□□□□ -0.48
SMAD6-203ENST00000558937 Q499Y3 187 aa12.05□□□□□ -0.48
SMAD6-203ENST00000558937 ABCA11PQ4W5N1 156 aa12.05□□□□□ -0.48
SMAD6-203ENST00000558937 KPRPQ5T749 579 aaPredicted RBP12.05□□□□□ -0.48
SMAD6-203ENST00000558937 ZNF485Q8NCK3 441 aa12.05□□□□□ -0.48
SMAD6-203ENST00000558937 OR4F17Q8NGA8 305 aa12.05□□□□□ -0.48
SMAD6-203ENST00000558937 RFESDQ8TAC1 157 aa12.05□□□□□ -0.48
SMAD6-203ENST00000558937 GGHQ92820 318 aa12.05□□□□□ -0.48
SMAD6-203ENST00000558937 PGLYRP3Q96LB9 341 aa12.05□□□□□ -0.48
SMAD6-203ENST00000558937 OR4F4Q96R69 305 aa12.05□□□□□ -0.48
SMAD6-203ENST00000558937 ZNF184Q99676 751 aaPredicted RBP12.05□□□□□ -0.48
SMAD6-203ENST00000558937 IFT22Q9H7X7 185 aa12.05□□□□□ -0.48
SMAD6-203ENST00000558937 CHCHD3Q9NX63 227 aaKnown RBP12.05□□□□□ -0.48
SMAD6-203ENST00000558937 TRAV8-7A0A075B6U6 113 aa12.04□□□□□ -0.48
SMAD6-203ENST00000558937 A0A1W2PP11 408 aa12.04□□□□□ -0.48
SMAD6-203ENST00000558937 A0A1W2PPI3 338 aa12.04□□□□□ -0.48
SMAD6-203ENST00000558937 GEMIN2O14893 280 aaKnown RBP12.04□□□□□ -0.48
SMAD6-203ENST00000558937 GPX5O75715 221 aa12.04□□□□□ -0.48
SMAD6-203ENST00000558937 AMY1AP04745 511 aa12.04□□□□□ -0.48
SMAD6-203ENST00000558937 AMY2AP04746 511 aa12.04□□□□□ -0.48
SMAD6-203ENST00000558937 LPLP06858 475 aa12.04□□□□□ -0.48
SMAD6-203ENST00000558937 FSTP19883 344 aa12.04□□□□□ -0.48
SMAD6-203ENST00000558937 CD83Q01151 205 aa12.04□□□□□ -0.48
SMAD6-203ENST00000558937 ST3GAL4Q11206 333 aa12.04□□□□□ -0.48
SMAD6-203ENST00000558937 YIF1BQ5BJH7 314 aa12.04□□□□□ -0.48
SMAD6-203ENST00000558937 LINC00596Q86U02 117 aa12.04□□□□□ -0.48
SMAD6-203ENST00000558937 OR5AU1Q8NGC0 362 aa12.04□□□□□ -0.48
SMAD6-203ENST00000558937 S100A13Q99584 98 aa12.04□□□□□ -0.48
SMAD6-203ENST00000558937 PCDHB16Q9NRJ7 776 aa12.04□□□□□ -0.48
SMAD6-203ENST00000558937 PAK1IP1Q9NWT1 392 aaPredicted RBP12.04□□□□□ -0.48
SMAD6-203ENST00000558937 PSG11Q9UQ72 335 aa12.04□□□□□ -0.48
SMAD6-203ENST00000558937 HSPE1-MOB4S4R3N1 261 aa12.04□□□□□ -0.48
SMAD6-203ENST00000558937 PRKDCP78527 4128 aaKnown RBP12.04□□□□□ -0.48
SMAD6-203ENST00000558937 TRBV5-7A0A0A0MS05 114 aa12.03□□□□□ -0.48
SMAD6-203ENST00000558937 A0A1W2PRX2 142 aa12.03□□□□□ -0.48
SMAD6-203ENST00000558937 TMEM30CPA0ZSE6 113 aa12.03□□□□□ -0.48
SMAD6-203ENST00000558937 FAM90A18PA6NE21 464 aa12.03□□□□□ -0.48
SMAD6-203ENST00000558937 FAM90A16PA6NEW6 464 aa12.03□□□□□ -0.48
SMAD6-203ENST00000558937 FAM90A20PA6NIJ5 464 aa12.03□□□□□ -0.48
SMAD6-203ENST00000558937 FAM90A9PA6NNJ1 464 aa12.03□□□□□ -0.48
SMAD6-203ENST00000558937 FAM90A12PA8MX19 464 aa12.03□□□□□ -0.48
SMAD6-203ENST00000558937 FAM90A5PA8MXJ8 464 aa12.03□□□□□ -0.48
SMAD6-203ENST00000558937 XPNPEP2O43895 674 aa12.03□□□□□ -0.48
SMAD6-203ENST00000558937 SNRNP70P08621 437 aaKnown RBP12.03□□□□□ -0.48
SMAD6-203ENST00000558937 FAM90A15PP0C7V4 464 aa12.03□□□□□ -0.48
SMAD6-203ENST00000558937 FAM90A13PP0C7W8 464 aa12.03□□□□□ -0.48
SMAD6-203ENST00000558937 FAM90A14PP0C7W9 464 aa12.03□□□□□ -0.48
SMAD6-203ENST00000558937 FAM90A24PP0C7X0 464 aa12.03□□□□□ -0.48
SMAD6-203ENST00000558937 CAPGP40121 348 aa12.03□□□□□ -0.48
SMAD6-203ENST00000558937 DIAPH2-AS1Q14236 149 aa12.03□□□□□ -0.48
SMAD6-203ENST00000558937 MPV17LQ2QL34 196 aa12.03□□□□□ -0.48
SMAD6-203ENST00000558937 SLC22A6Q4U2R8 563 aa12.03□□□□□ -0.48
SMAD6-203ENST00000558937 ATAD3CQ5T2N8 411 aa12.03□□□□□ -0.48
SMAD6-203ENST00000558937 LAIR2Q6ISS4 152 aa12.03□□□□□ -0.48
SMAD6-203ENST00000558937 C8orf59Q8N0T1 100 aaPredicted RBP12.03□□□□□ -0.48
SMAD6-203ENST00000558937 OR10A7Q8NGE5 316 aa12.03□□□□□ -0.48
SMAD6-203ENST00000558937 OR56B4Q8NH76 319 aa12.03□□□□□ -0.48
SMAD6-203ENST00000558937 OR14A2Q96R54 314 aa12.03□□□□□ -0.48
SMAD6-203ENST00000558937 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.03□□□□□ -0.48
SMAD6-203ENST00000558937 MOB4Q9Y3A3 225 aa12.03□□□□□ -0.48
SMAD6-203ENST00000558937 NOTCH3Q9UM47 2321 aa12.03□□□□□ -0.48
SMAD6-203ENST00000558937 PNMA8CA0A1B0GUJ8 204 aa12.02□□□□□ -0.49
SMAD6-203ENST00000558937 A0A1W2PPE3 182 aa12.02□□□□□ -0.49
SMAD6-203ENST00000558937 A0A1W2PPK0 400 aa12.02□□□□□ -0.49
SMAD6-203ENST00000558937 EFCAB10A6NFE3 127 aa12.02□□□□□ -0.49
SMAD6-203ENST00000558937 ZNF780AO75290 641 aaPredicted RBP12.02□□□□□ -0.49
SMAD6-203ENST00000558937 GNAO1P09471 354 aa12.02□□□□□ -0.49
SMAD6-203ENST00000558937 TAS2R43P59537 309 aa12.02□□□□□ -0.49
SMAD6-203ENST00000558937 MADCAM1Q13477 382 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms