RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 TRAV8-7A0A075B6U6 113 aa10.73□□□□□ -0.69
VPS18-203ENST00000558855 TCRBV4S1A1TA0A5B7 111 aa10.73□□□□□ -0.69
VPS18-203ENST00000558855 FUOMA2VDF0 154 aa10.73□□□□□ -0.69
VPS18-203ENST00000558855 TOR1AO14656 332 aa10.73□□□□□ -0.69
VPS18-203ENST00000558855 XPNPEP2O43895 674 aa10.73□□□□□ -0.69
VPS18-203ENST00000558855 HTR3BO95264 441 aa10.73□□□□□ -0.69
VPS18-203ENST00000558855 RPSAP08865 295 aaKnown RBP10.73□□□□□ -0.69
VPS18-203ENST00000558855 CCDC159P0C7I6 412 aa10.73□□□□□ -0.69
VPS18-203ENST00000558855 BRS3P32247 399 aa10.73□□□□□ -0.69
VPS18-203ENST00000558855 RPS11P62280 158 aaKnown RBP eCLIP10.73□□□□□ -0.69
VPS18-203ENST00000558855 IL13RA2Q14627 380 aa10.73□□□□□ -0.69
VPS18-203ENST00000558855 LAIR2Q6ISS4 152 aa10.73□□□□□ -0.69
VPS18-203ENST00000558855 CENPVQ7Z7K6 275 aaPredicted RBP10.73□□□□□ -0.69
VPS18-203ENST00000558855 ZNF329Q86UD4 541 aa10.73□□□□□ -0.69
VPS18-203ENST00000558855 C5orf56Q8N8D9 126 aa10.73□□□□□ -0.69
VPS18-203ENST00000558855 SUMF2Q8NBJ7 301 aa10.73□□□□□ -0.69
VPS18-203ENST00000558855 ZNF485Q8NCK3 441 aa10.73□□□□□ -0.69
VPS18-203ENST00000558855 SGCDQ92629 289 aa10.73□□□□□ -0.69
VPS18-203ENST00000558855 GPER1Q99527 375 aa10.73□□□□□ -0.69
VPS18-203ENST00000558855 OR6C3Q9NZP0 311 aa10.73□□□□□ -0.69
VPS18-203ENST00000558855 PCDHGB5Q9Y5G0 923 aa10.73□□□□□ -0.69
VPS18-203ENST00000558855 IGHV3-72A0A0B4J1Y9 119 aa10.72□□□□□ -0.69
VPS18-203ENST00000558855 WI2-2373I1.2A0A1W2PRP0 233 aa10.72□□□□□ -0.69
VPS18-203ENST00000558855 C15orf65H3BRN8 121 aa10.72□□□□□ -0.69
VPS18-203ENST00000558855 GEMIN2O14893 280 aaKnown RBP10.72□□□□□ -0.69
VPS18-203ENST00000558855 SLC31A2O15432 143 aa10.72□□□□□ -0.69
VPS18-203ENST00000558855 IGFBP3P17936 291 aaPredicted RBP10.72□□□□□ -0.69
VPS18-203ENST00000558855 CD33P20138 364 aa10.72□□□□□ -0.69
VPS18-203ENST00000558855 REG1BP48304 166 aa10.72□□□□□ -0.69
VPS18-203ENST00000558855 RBM11P57052 281 aaKnown RBP10.72□□□□□ -0.69
VPS18-203ENST00000558855 PAX5Q02548 391 aa10.72□□□□□ -0.69
VPS18-203ENST00000558855 DDI2Q5TDH0 399 aa10.72□□□□□ -0.69
VPS18-203ENST00000558855 DTX3Q8N9I9 347 aa10.72□□□□□ -0.69
VPS18-203ENST00000558855 TMEM106AQ96A25 262 aa10.72□□□□□ -0.69
VPS18-203ENST00000558855 DPCDQ9BVM2 203 aaPredicted RBP10.72□□□□□ -0.69
VPS18-203ENST00000558855 ST3GAL6Q9Y274 331 aa10.72□□□□□ -0.69
VPS18-203ENST00000558855 MOB4Q9Y3A3 225 aa10.72□□□□□ -0.69
VPS18-203ENST00000558855 RPL36Q9Y3U8 105 aaKnown RBP10.72□□□□□ -0.69
VPS18-203ENST00000558855 TSSC4Q9Y5U2 329 aaPredicted RBP10.72□□□□□ -0.69
VPS18-203ENST00000558855 HSPE1-MOB4S4R3N1 261 aa10.72□□□□□ -0.69
VPS18-203ENST00000558855 IGHV3-43A0A0B4J1X8 118 aa10.71□□□□□ -0.69
VPS18-203ENST00000558855 TRBV5-5A0A0J9YX44 114 aa10.71□□□□□ -0.69
VPS18-203ENST00000558855 SNTNA6NMZ2 147 aa10.71□□□□□ -0.69
VPS18-203ENST00000558855 OGG1O15527 345 aa10.71□□□□□ -0.69
VPS18-203ENST00000558855 MPZL2O60487 215 aa10.71□□□□□ -0.69
VPS18-203ENST00000558855 MPIG6BO95866 241 aa10.71□□□□□ -0.69
VPS18-203ENST00000558855 ALDOBP05062 364 aa10.71□□□□□ -0.69
VPS18-203ENST00000558855 IGHV3-43DP0DP04 118 aa10.71□□□□□ -0.69
VPS18-203ENST00000558855 PF4V1P10720 104 aa10.71□□□□□ -0.69
VPS18-203ENST00000558855 SERPINA2P20848 420 aa10.71□□□□□ -0.69
VPS18-203ENST00000558855 HOXD3P31249 432 aaPredicted RBP10.71□□□□□ -0.69
VPS18-203ENST00000558855 CEACAM3P40198 252 aa10.71□□□□□ -0.69
VPS18-203ENST00000558855 PRRX1P54821 245 aa10.71□□□□□ -0.69
VPS18-203ENST00000558855 LOXL3P58215 753 aa10.71□□□□□ -0.69
VPS18-203ENST00000558855 HNF4GQ14541 408 aa10.71□□□□□ -0.69
VPS18-203ENST00000558855 RSU1Q15404 277 aa10.71□□□□□ -0.69
VPS18-203ENST00000558855 KHDC1LQ5JSQ8 128 aa10.71□□□□□ -0.69
VPS18-203ENST00000558855 RPL22L1Q6P5R6 122 aaKnown RBP10.71□□□□□ -0.69
VPS18-203ENST00000558855 OSR2Q8N2R0 312 aa10.71□□□□□ -0.69
VPS18-203ENST00000558855 LINC00482Q8N8I6 264 aa10.71□□□□□ -0.69
VPS18-203ENST00000558855 GPR148Q8TDV2 347 aa10.71□□□□□ -0.69
VPS18-203ENST00000558855 RPEQ96AT9 228 aa10.71□□□□□ -0.69
VPS18-203ENST00000558855 PGLYRP3Q96LB9 341 aa10.71□□□□□ -0.69
VPS18-203ENST00000558855 Q96MT0 163 aa10.71□□□□□ -0.69
VPS18-203ENST00000558855 NCOR1P1Q9H4R4 102 aa10.71□□□□□ -0.69
VPS18-203ENST00000558855 ING4Q9UNL4 249 aa10.71□□□□□ -0.69
VPS18-203ENST00000558855 OOSP1A8MZH6 123 aa10.7□□□□□ -0.7
VPS18-203ENST00000558855 ZNF736B4DX44 427 aaPredicted RBP10.7□□□□□ -0.7
VPS18-203ENST00000558855 IGKV1D-33P01593 117 aa10.7□□□□□ -0.7
VPS18-203ENST00000558855 IGKV1-33P01594 117 aa10.7□□□□□ -0.7
VPS18-203ENST00000558855 MRPL28Q13084 256 aaKnown RBP10.7□□□□□ -0.7
VPS18-203ENST00000558855 KLHL22Q53GT1 634 aa10.7□□□□□ -0.7
VPS18-203ENST00000558855 NHLRC3Q5JS37 347 aa10.7□□□□□ -0.7
VPS18-203ENST00000558855 DMKNQ6E0U4 476 aaPredicted RBP10.7□□□□□ -0.7
VPS18-203ENST00000558855 REC114Q7Z4M0 266 aa10.7□□□□□ -0.7
VPS18-203ENST00000558855 Q8N6K4 173 aa10.7□□□□□ -0.7
VPS18-203ENST00000558855 OR52N1Q8NH53 320 aa10.7□□□□□ -0.7
VPS18-203ENST00000558855 CCDC107Q8WV48 283 aa10.7□□□□□ -0.7
VPS18-203ENST00000558855 SMIM19Q96E16 107 aa10.7□□□□□ -0.7
VPS18-203ENST00000558855 MRPL48Q96GC5 212 aaKnown RBP10.7□□□□□ -0.7
VPS18-203ENST00000558855 IFT22Q9H7X7 185 aa10.7□□□□□ -0.7
VPS18-203ENST00000558855 SMPD3Q9NY59 655 aaPredicted RBP10.7□□□□□ -0.7
VPS18-203ENST00000558855 IL36GQ9NZH8 169 aa10.7□□□□□ -0.7
VPS18-203ENST00000558855 PNMA8CA0A1B0GUJ8 204 aa10.69□□□□□ -0.7
VPS18-203ENST00000558855 A0A1W2PPK0 400 aa10.69□□□□□ -0.7
VPS18-203ENST00000558855 PSMB11A5LHX3 300 aa10.69□□□□□ -0.7
VPS18-203ENST00000558855 HSD17B6O14756 317 aa10.69□□□□□ -0.7
VPS18-203ENST00000558855 OR7C1O76099 320 aaPredicted RBP10.69□□□□□ -0.7
VPS18-203ENST00000558855 BAG2O95816 211 aa10.69□□□□□ -0.7
VPS18-203ENST00000558855 PF4P02776 101 aa10.69□□□□□ -0.7
VPS18-203ENST00000558855 TMEM11P17152 192 aa10.69□□□□□ -0.7
VPS18-203ENST00000558855 BDKRB2P30411 391 aa10.69□□□□□ -0.7
VPS18-203ENST00000558855 ZNF93P35789 620 aaPredicted RBP10.69□□□□□ -0.7
VPS18-203ENST00000558855 VHLP40337 213 aa10.69□□□□□ -0.7
VPS18-203ENST00000558855 MNDAP41218 407 aa10.69□□□□□ -0.7
VPS18-203ENST00000558855 MADCAM1Q13477 382 aa10.69□□□□□ -0.7
VPS18-203ENST00000558855 LRRC36Q1X8D7 754 aa10.69□□□□□ -0.7
VPS18-203ENST00000558855 C11orf87Q6NUJ2 197 aa10.69□□□□□ -0.7
VPS18-203ENST00000558855 LCNL1Q6ZST4 164 aa10.69□□□□□ -0.7
VPS18-203ENST00000558855 LYPD6Q86Y78 171 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms