RNA–Protein interactions for RNA: ENST00000558787.1

MARK3-215, Transcript of microtubule affinity regulating kinase 3, human

TSL 2

Gene MARK3, Length 758 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-215	ENST00000558787	CD28	P10747	220 aa		5.63	□□□□□ -1.51
MARK3-215	ENST00000558787	CD36	P16671	472 aa		5.63	□□□□□ -1.51
MARK3-215	ENST00000558787	ZNF20	P17024	532 aa		5.63	□□□□□ -1.51
MARK3-215	ENST00000558787	BCL3	P20749	454 aa		5.63	□□□□□ -1.51
MARK3-215	ENST00000558787	GAL	P22466	123 aa		5.63	□□□□□ -1.51
MARK3-215	ENST00000558787	MAPK3	P27361	379 aa	Predicted RBP	5.63	□□□□□ -1.51
MARK3-215	ENST00000558787	GTF2A1	P52655	376 aa	Predicted RBP	5.63	□□□□□ -1.51
MARK3-215	ENST00000558787	NANOS3	P60323	173 aa	Known RBP	5.63	□□□□□ -1.51
MARK3-215	ENST00000558787	IL24	Q13007	206 aa		5.63	□□□□□ -1.51
MARK3-215	ENST00000558787	NSUN5P1	Q3KNT7	163 aa		5.63	□□□□□ -1.51
MARK3-215	ENST00000558787	TMEM244	Q5VVB8	128 aa		5.63	□□□□□ -1.51
MARK3-215	ENST00000558787	LIPK	Q5VXJ0	399 aa		5.63	□□□□□ -1.51
MARK3-215	ENST00000558787	BAIAP2L2	Q6UXY1	529 aa		5.63	□□□□□ -1.51
MARK3-215	ENST00000558787	GDPD3	Q7L5L3	318 aa		5.63	□□□□□ -1.51
MARK3-215	ENST00000558787	TCF23	Q7RTU1	214 aa		5.63	□□□□□ -1.51
MARK3-215	ENST00000558787	ZNF676	Q8N7Q3	588 aa		5.63	□□□□□ -1.51
MARK3-215	ENST00000558787	OR4S1	Q8NGB4	309 aa		5.63	□□□□□ -1.51
MARK3-215	ENST00000558787	OR10AC1	Q8NH08	325 aa		5.63	□□□□□ -1.51
MARK3-215	ENST00000558787	OR2T6	Q8NHC8	308 aa		5.63	□□□□□ -1.51
MARK3-215	ENST00000558787	RPS4Y2	Q8TD47	263 aa		5.63	□□□□□ -1.51
MARK3-215	ENST00000558787	CFHR4	Q92496	578 aa		5.63	□□□□□ -1.51
MARK3-215	ENST00000558787	PHYHIP	Q92561	330 aa		5.63	□□□□□ -1.51
MARK3-215	ENST00000558787	GHSR	Q92847	366 aa		5.63	□□□□□ -1.51
MARK3-215	ENST00000558787	RFT1	Q96AA3	541 aa		5.63	□□□□□ -1.51
MARK3-215	ENST00000558787	FGGY	Q96C11	551 aa		5.63	□□□□□ -1.51
MARK3-215	ENST00000558787	ADAT3	Q96EY9	351 aa	Predicted RBP	5.63	□□□□□ -1.51
MARK3-215	ENST00000558787	CEP19	Q96LK0	163 aa		5.63	□□□□□ -1.51
MARK3-215	ENST00000558787	CCDC140	Q96MF4	163 aa		5.63	□□□□□ -1.51
MARK3-215	ENST00000558787	PKIB	Q9C010	78 aa		5.63	□□□□□ -1.51
MARK3-215	ENST00000558787	ZNF702P	Q9H963	129 aa		5.63	□□□□□ -1.51
MARK3-215	ENST00000558787	PLEKHA1	Q9HB21	404 aa		5.63	□□□□□ -1.51
MARK3-215	ENST00000558787	BATF3	Q9NR55	127 aa		5.63	□□□□□ -1.51
MARK3-215	ENST00000558787	RBFOX1	Q9NWB1	397 aa	Known RBP	5.63	□□□□□ -1.51
MARK3-215	ENST00000558787	TET2	Q6N021	2002 aa	Predicted RBP	5.63	□□□□□ -1.51
MARK3-215	ENST00000558787	DNAH3	Q8TD57	4116 aa		5.63	□□□□□ -1.51
MARK3-215	ENST00000558787	SMIM31	A0A1B0GVY4	71 aa		5.62	□□□□□ -1.51
MARK3-215	ENST00000558787	FAM172BP	A6NC97	362 aa		5.62	□□□□□ -1.51
MARK3-215	ENST00000558787		A6NDX4	124 aa		5.62	□□□□□ -1.51
MARK3-215	ENST00000558787	DHRS7C	A6NNS2	312 aa		5.62	□□□□□ -1.51
MARK3-215	ENST00000558787	ODF3B	A8MYP8	253 aa		5.62	□□□□□ -1.51
MARK3-215	ENST00000558787	SIRPB1	O00241	398 aa		5.62	□□□□□ -1.51
MARK3-215	ENST00000558787	NOL3	O60936	208 aa	Known RBP	5.62	□□□□□ -1.51
MARK3-215	ENST00000558787	ZFPL1	O95159	310 aa		5.62	□□□□□ -1.51
MARK3-215	ENST00000558787	HAND1	O96004	215 aa		5.62	□□□□□ -1.51
MARK3-215	ENST00000558787	IGHV1-8	P0DP01	117 aa		5.62	□□□□□ -1.51
MARK3-215	ENST00000558787	GABRR1	P24046	479 aa		5.62	□□□□□ -1.51
MARK3-215	ENST00000558787	CD24	P25063	80 aa		5.62	□□□□□ -1.51
MARK3-215	ENST00000558787	POU3F4	P49335	361 aa		5.62	□□□□□ -1.51
MARK3-215	ENST00000558787	FUT6	P51993	359 aa		5.62	□□□□□ -1.51
MARK3-215	ENST00000558787	MTCP1	P56278	107 aa		5.62	□□□□□ -1.51
MARK3-215	ENST00000558787	BLCAP	P62952	87 aa		5.62	□□□□□ -1.51
MARK3-215	ENST00000558787	SCN1B	Q07699	218 aa		5.62	□□□□□ -1.51
MARK3-215	ENST00000558787	GRK1	Q15835	563 aa		5.62	□□□□□ -1.51
MARK3-215	ENST00000558787	SSX1	Q16384	188 aa		5.62	□□□□□ -1.51
MARK3-215	ENST00000558787	AANAT	Q16613	207 aa		5.62	□□□□□ -1.51
MARK3-215	ENST00000558787	TMEM95	Q3KNT9	176 aa		5.62	□□□□□ -1.51
MARK3-215	ENST00000558787	UTF1	Q5T230	341 aa		5.62	□□□□□ -1.51
MARK3-215	ENST00000558787	ZNF626	Q68DY1	528 aa		5.62	□□□□□ -1.51
MARK3-215	ENST00000558787	OR8H2	Q8N162	312 aa		5.62	□□□□□ -1.51
MARK3-215	ENST00000558787	ZFP41	Q8N8Y5	198 aa		5.62	□□□□□ -1.51
MARK3-215	ENST00000558787	OR13D1	Q8NGV5	346 aa		5.62	□□□□□ -1.51
MARK3-215	ENST00000558787	GPR148	Q8TDV2	347 aa		5.62	□□□□□ -1.51
MARK3-215	ENST00000558787	EMG1	Q92979	244 aa	Known RBP	5.62	□□□□□ -1.51
MARK3-215	ENST00000558787	YIPF6	Q96EC8	236 aa		5.62	□□□□□ -1.51
MARK3-215	ENST00000558787	BORCS8	Q96FH0	119 aa		5.62	□□□□□ -1.51
MARK3-215	ENST00000558787	SNX22	Q96L94	193 aa		5.62	□□□□□ -1.51
MARK3-215	ENST00000558787	PGLYRP3	Q96LB9	341 aa		5.62	□□□□□ -1.51
MARK3-215	ENST00000558787	SPACA5	Q96QH8	159 aa		5.62	□□□□□ -1.51
MARK3-215	ENST00000558787	PDCD1LG2	Q9BQ51	273 aa		5.62	□□□□□ -1.51
MARK3-215	ENST00000558787	BCL7B	Q9BQE9	202 aa		5.62	□□□□□ -1.51
MARK3-215	ENST00000558787	TMED9	Q9BVK6	235 aa		5.62	□□□□□ -1.51
MARK3-215	ENST00000558787	NPFFR1	Q9GZQ6	430 aa		5.62	□□□□□ -1.51
MARK3-215	ENST00000558787	CHST5	Q9GZS9	411 aa		5.62	□□□□□ -1.51
MARK3-215	ENST00000558787	ABCB10	Q9NRK6	738 aa		5.62	□□□□□ -1.51
MARK3-215	ENST00000558787	SERTAD4	Q9NUC0	356 aa		5.62	□□□□□ -1.51
MARK3-215	ENST00000558787	ING3	Q9NXR8	418 aa		5.62	□□□□□ -1.51
MARK3-215	ENST00000558787	HHLA2	Q9UM44	414 aa		5.62	□□□□□ -1.51
MARK3-215	ENST00000558787	STUB1	Q9UNE7	303 aa		5.62	□□□□□ -1.51
MARK3-215	ENST00000558787	TCF19	Q9Y242	345 aa		5.62	□□□□□ -1.51
MARK3-215	ENST00000558787	SIRT4	Q9Y6E7	314 aa	Predicted RBP	5.62	□□□□□ -1.51
MARK3-215	ENST00000558787	IGKV1-12	A0A0C4DH73	117 aa		5.61	□□□□□ -1.51
MARK3-215	ENST00000558787	PNMA8C	A0A1B0GUJ8	204 aa		5.61	□□□□□ -1.51
MARK3-215	ENST00000558787	TRDV1	A0A1B0GX56	115 aa		5.61	□□□□□ -1.51
MARK3-215	ENST00000558787		A0A1W2PRX2	142 aa		5.61	□□□□□ -1.51
MARK3-215	ENST00000558787	VGLL3	A8MV65	326 aa		5.61	□□□□□ -1.51
MARK3-215	ENST00000558787	ZNF701	M0R085	212 aa	Predicted RBP	5.61	□□□□□ -1.51
MARK3-215	ENST00000558787	GATB	O75879	557 aa	Known RBP	5.61	□□□□□ -1.51
MARK3-215	ENST00000558787	IGKV1D-12	P01611	117 aa		5.61	□□□□□ -1.51
MARK3-215	ENST00000558787	OPN1MW	P04001	364 aa		5.61	□□□□□ -1.51
MARK3-215	ENST00000558787	CD2	P06729	351 aa		5.61	□□□□□ -1.51
MARK3-215	ENST00000558787	OCM2	P0CE71	109 aa		5.61	□□□□□ -1.51
MARK3-215	ENST00000558787	OPN1MW2	P0DN77	364 aa		5.61	□□□□□ -1.51
MARK3-215	ENST00000558787	OPN1MW3	P0DN78	364 aa		5.61	□□□□□ -1.51
MARK3-215	ENST00000558787	PRKACA	P17612	351 aa		5.61	□□□□□ -1.51
MARK3-215	ENST00000558787	ATF1	P18846	271 aa		5.61	□□□□□ -1.51
MARK3-215	ENST00000558787	OR3A1	P47881	315 aa		5.61	□□□□□ -1.51
MARK3-215	ENST00000558787	RBP2	P50120	134 aa		5.61	□□□□□ -1.51
MARK3-215	ENST00000558787	TMBIM6	P55061	237 aa		5.61	□□□□□ -1.51
MARK3-215	ENST00000558787	RPS25	P62851	125 aa	Known RBP	5.61	□□□□□ -1.51
MARK3-215	ENST00000558787	CNN3	Q15417	329 aa	Known RBP	5.61	□□□□□ -1.51

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