RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 MUL1Q969V5 352 aa6.9□□□□□ -1.3
TPM1-213ENST00000558400 SSX3Q99909 188 aa6.9□□□□□ -1.3
TPM1-213ENST00000558400 DPCDQ9BVM2 203 aaPredicted RBP6.9□□□□□ -1.3
TPM1-213ENST00000558400 CLEC7AQ9BXN2 247 aa6.9□□□□□ -1.3
TPM1-213ENST00000558400 CHIAQ9BZP6 476 aa6.9□□□□□ -1.3
TPM1-213ENST00000558400 TMEM133Q9H2Q1 129 aa6.9□□□□□ -1.3
TPM1-213ENST00000558400 BEX1Q9HBH7 125 aa6.9□□□□□ -1.3
TPM1-213ENST00000558400 RAB18Q9NP72 206 aa6.9□□□□□ -1.3
TPM1-213ENST00000558400 MMP24Q9Y5R2 645 aa6.9□□□□□ -1.3
TPM1-213ENST00000558400 MEGF8Q7Z7M0 2845 aa6.9□□□□□ -1.31
TPM1-213ENST00000558400 SVEP1Q4LDE5 3571 aa6.89□□□□□ -1.31
TPM1-213ENST00000558400 TMEM30CPA0ZSE6 113 aa6.89□□□□□ -1.31
TPM1-213ENST00000558400 VGLL3A8MV65 326 aa6.89□□□□□ -1.31
TPM1-213ENST00000558400 J3QL48 77 aa6.89□□□□□ -1.31
TPM1-213ENST00000558400 TOR1AO14656 332 aa6.89□□□□□ -1.31
TPM1-213ENST00000558400 GEMIN2O14893 280 aaKnown RBP6.89□□□□□ -1.31
TPM1-213ENST00000558400 CRTAPO75718 401 aaPredicted RBP6.89□□□□□ -1.31
TPM1-213ENST00000558400 NDUFA7O95182 113 aa6.89□□□□□ -1.31
TPM1-213ENST00000558400 IGHV4-59P01825 116 aa6.89□□□□□ -1.31
TPM1-213ENST00000558400 CGB3P0DN86 165 aa6.89□□□□□ -1.31
TPM1-213ENST00000558400 CGB7P0DN87 165 aa6.89□□□□□ -1.31
TPM1-213ENST00000558400 MGMTP16455 207 aa6.89□□□□□ -1.31
TPM1-213ENST00000558400 FUT3P21217 361 aa6.89□□□□□ -1.31
TPM1-213ENST00000558400 GALP22466 123 aa6.89□□□□□ -1.31
TPM1-213ENST00000558400 COX7A1P24310 79 aa6.89□□□□□ -1.31
TPM1-213ENST00000558400 CDK2P24941 298 aa6.89□□□□□ -1.31
TPM1-213ENST00000558400 HTR1DP28221 377 aa6.89□□□□□ -1.31
TPM1-213ENST00000558400 HTR2CP28335 458 aa6.89□□□□□ -1.31
TPM1-213ENST00000558400 CD34P28906 385 aa6.89□□□□□ -1.31
TPM1-213ENST00000558400 CEACAM3P40198 252 aa6.89□□□□□ -1.31
TPM1-213ENST00000558400 ARHGDIBP52566 201 aa6.89□□□□□ -1.31
TPM1-213ENST00000558400 DLX1P56177 255 aa6.89□□□□□ -1.31
TPM1-213ENST00000558400 PRB3Q04118 309 aaPredicted RBP6.89□□□□□ -1.31
TPM1-213ENST00000558400 EMX1Q04741 257 aaPredicted RBP6.89□□□□□ -1.31
TPM1-213ENST00000558400 DYNC1I2Q13409 638 aaKnown RBP6.89□□□□□ -1.31
TPM1-213ENST00000558400 ATXN7L3Q14CW9 347 aaPredicted RBP6.89□□□□□ -1.31
TPM1-213ENST00000558400 TAF9Q16594 264 aa6.89□□□□□ -1.31
TPM1-213ENST00000558400 LRRC75BQ2VPJ9 315 aa6.89□□□□□ -1.31
TPM1-213ENST00000558400 AWAT1Q58HT5 328 aa6.89□□□□□ -1.31
TPM1-213ENST00000558400 ATAD3CQ5T2N8 411 aa6.89□□□□□ -1.31
TPM1-213ENST00000558400 LCE2AQ5TA79 106 aaPredicted RBP6.89□□□□□ -1.31
TPM1-213ENST00000558400 TCF23Q7RTU1 214 aa6.89□□□□□ -1.31
TPM1-213ENST00000558400 LRRTM1Q86UE6 522 aa6.89□□□□□ -1.31
TPM1-213ENST00000558400 ABHD12Q8N2K0 398 aa6.89□□□□□ -1.31
TPM1-213ENST00000558400 NEK7Q8TDX7 302 aa6.89□□□□□ -1.31
TPM1-213ENST00000558400 COQ2Q96H96 371 aa6.89□□□□□ -1.31
TPM1-213ENST00000558400 SELENOIQ9C0D9 397 aa6.89□□□□□ -1.31
TPM1-213ENST00000558400 LINC00574Q9H8X3 128 aa6.89□□□□□ -1.31
TPM1-213ENST00000558400 ABCB10Q9NRK6 738 aa6.89□□□□□ -1.31
TPM1-213ENST00000558400 TNFRSF19Q9NS68 423 aa6.89□□□□□ -1.31
TPM1-213ENST00000558400 KIF25Q9UIL4 384 aa6.89□□□□□ -1.31
TPM1-213ENST00000558400 PITPNC1Q9UKF7 332 aa6.89□□□□□ -1.31
TPM1-213ENST00000558400 VPREB3Q9UKI3 123 aa6.89□□□□□ -1.31
TPM1-213ENST00000558400 MGAM2Q2M2H8 2515 aa6.89□□□□□ -1.31
TPM1-213ENST00000558400 A0A087X0M5 115 aa6.88□□□□□ -1.31
TPM1-213ENST00000558400 IGHV2-26A0A0B4J1V2 119 aa6.88□□□□□ -1.31
TPM1-213ENST00000558400 A0A1B0GX30 115 aa6.88□□□□□ -1.31
TPM1-213ENST00000558400 MAGEA13PA6NCF6 341 aa6.88□□□□□ -1.31
TPM1-213ENST00000558400 ODF3BA8MYP8 253 aa6.88□□□□□ -1.31
TPM1-213ENST00000558400 LEUTXA8MZ59 168 aa6.88□□□□□ -1.31
TPM1-213ENST00000558400 HSPB6O14558 160 aa6.88□□□□□ -1.31
TPM1-213ENST00000558400 PDCD5O14737 125 aa6.88□□□□□ -1.31
TPM1-213ENST00000558400 ORC5O43913 435 aa6.88□□□□□ -1.31
TPM1-213ENST00000558400 GPR137BO60478 399 aa6.88□□□□□ -1.31
TPM1-213ENST00000558400 CFPP27918 469 aa6.88□□□□□ -1.31
TPM1-213ENST00000558400 BRS3P32247 399 aa6.88□□□□□ -1.31
TPM1-213ENST00000558400 MAP2K4P45985 399 aa6.88□□□□□ -1.31
TPM1-213ENST00000558400 DYNLT3P51808 116 aa6.88□□□□□ -1.31
TPM1-213ENST00000558400 GP2P55259 537 aaKnown RBP6.88□□□□□ -1.31
TPM1-213ENST00000558400 FAM189A2Q15884 450 aa6.88□□□□□ -1.31
TPM1-213ENST00000558400 SSX2Q16385 188 aa6.88□□□□□ -1.31
TPM1-213ENST00000558400 RSBN1Q5VWQ0 802 aaPredicted RBP6.88□□□□□ -1.31
TPM1-213ENST00000558400 TRAT1Q6PIZ9 186 aa6.88□□□□□ -1.31
TPM1-213ENST00000558400 SHISA2Q6UWI4 295 aa6.88□□□□□ -1.31
TPM1-213ENST00000558400 TMEM91Q6ZNR0 172 aa6.88□□□□□ -1.31
TPM1-213ENST00000558400 OR52M1Q8NGK5 317 aa6.88□□□□□ -1.31
TPM1-213ENST00000558400 OR6M1Q8NGM8 313 aa6.88□□□□□ -1.31
TPM1-213ENST00000558400 NDNFQ8TB73 568 aa6.88□□□□□ -1.31
TPM1-213ENST00000558400 AJUBAQ96IF1 538 aa6.88□□□□□ -1.31
TPM1-213ENST00000558400 NEDD4LQ96PU5 975 aa6.88□□□□□ -1.31
TPM1-213ENST00000558400 ZNF747Q9BV97 191 aa6.88□□□□□ -1.31
TPM1-213ENST00000558400 ING3Q9NXR8 418 aa6.88□□□□□ -1.31
TPM1-213ENST00000558400 C1RLQ9NZP8 487 aa6.88□□□□□ -1.31
TPM1-213ENST00000558400 RCC2Q9P258 522 aaKnown RBP6.88□□□□□ -1.31
TPM1-213ENST00000558400 DPM3Q9P2X0 92 aa6.88□□□□□ -1.31
TPM1-213ENST00000558400 PEX16Q9Y5Y5 336 aa6.88□□□□□ -1.31
TPM1-213ENST00000558400 TRAV1-2A0A0B4J238 106 aa6.87□□□□□ -1.31
TPM1-213ENST00000558400 TRDV1A0A1B0GX56 115 aa6.87□□□□□ -1.31
TPM1-213ENST00000558400 MEX3AA1L020 520 aaKnown RBP6.87□□□□□ -1.31
TPM1-213ENST00000558400 CLPSL1A2RUU4 121 aa6.87□□□□□ -1.31
TPM1-213ENST00000558400 OOSP1A8MZH6 123 aa6.87□□□□□ -1.31
TPM1-213ENST00000558400 NPIPB11E5RHQ5 1161 aa6.87□□□□□ -1.31
TPM1-213ENST00000558400 H3BUX3 64 aa6.87□□□□□ -1.31
TPM1-213ENST00000558400 CCRL2O00421 344 aa6.87□□□□□ -1.31
TPM1-213ENST00000558400 SLC17A2O00624 439 aa6.87□□□□□ -1.31
TPM1-213ENST00000558400 SLC22A1O15245 554 aa6.87□□□□□ -1.31
TPM1-213ENST00000558400 TSPAN9O75954 239 aa6.87□□□□□ -1.31
TPM1-213ENST00000558400 IL1AP01583 271 aa6.87□□□□□ -1.31
TPM1-213ENST00000558400 MT-ND4P03905 459 aa6.87□□□□□ -1.31
TPM1-213ENST00000558400 ARSBP15848 533 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms