RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 FAM90A5PA8MXJ8 464 aa11.72□□□□□ -0.53
USP3-205ENST00000557884 FAM90A23PA8MXZ1 464 aa11.72□□□□□ -0.53
USP3-205ENST00000557884 LDLRAD4O15165 306 aa11.72□□□□□ -0.53
USP3-205ENST00000557884 MMP23AO75900 390 aa11.72□□□□□ -0.53
USP3-205ENST00000557884 CLPXO76031 633 aa11.72□□□□□ -0.53
USP3-205ENST00000557884 FAM90A15PP0C7V4 464 aa11.72□□□□□ -0.53
USP3-205ENST00000557884 FAM90A13PP0C7W8 464 aa11.72□□□□□ -0.53
USP3-205ENST00000557884 FAM90A14PP0C7W9 464 aa11.72□□□□□ -0.53
USP3-205ENST00000557884 FAM90A24PP0C7X0 464 aa11.72□□□□□ -0.53
USP3-205ENST00000557884 OMGP23515 440 aa11.72□□□□□ -0.53
USP3-205ENST00000557884 CHATP28329 748 aa11.72□□□□□ -0.53
USP3-205ENST00000557884 BLVRBP30043 206 aaPredicted RBP11.72□□□□□ -0.53
USP3-205ENST00000557884 EFNB2P52799 333 aa11.72□□□□□ -0.53
USP3-205ENST00000557884 SFXN4Q6P4A7 337 aa11.72□□□□□ -0.53
USP3-205ENST00000557884 GDPGP1Q6ZNW5 385 aa11.72□□□□□ -0.53
USP3-205ENST00000557884 TPRA1Q86W33 373 aa11.72□□□□□ -0.53
USP3-205ENST00000557884 SIGLECL1Q8N7X8 197 aa11.72□□□□□ -0.53
USP3-205ENST00000557884 MRGPRDQ8TDS7 321 aa11.72□□□□□ -0.53
USP3-205ENST00000557884 ZNF418Q8TF45 676 aaPredicted RBP11.72□□□□□ -0.53
USP3-205ENST00000557884 CORO2AQ92828 525 aa11.72□□□□□ -0.53
USP3-205ENST00000557884 ZNF48Q96MX3 618 aaPredicted RBP11.72□□□□□ -0.53
USP3-205ENST00000557884 NEDD4LQ96PU5 975 aa11.72□□□□□ -0.53
USP3-205ENST00000557884 URM1Q9BTM9 101 aaKnown RBP11.72□□□□□ -0.53
USP3-205ENST00000557884 TM2D1Q9BX74 207 aa11.72□□□□□ -0.53
USP3-205ENST00000557884 UNKLQ9H9P5 680 aaKnown RBP11.72□□□□□ -0.53
USP3-205ENST00000557884 OR6C3Q9NZP0 311 aa11.72□□□□□ -0.53
USP3-205ENST00000557884 A0A0U1RQK1 487 aa11.71□□□□□ -0.53
USP3-205ENST00000557884 FAM172BPA6NC97 362 aa11.71□□□□□ -0.53
USP3-205ENST00000557884 NPFFO15130 113 aa11.71□□□□□ -0.53
USP3-205ENST00000557884 SOCS1O15524 211 aa11.71□□□□□ -0.53
USP3-205ENST00000557884 TFAP2AP05549 437 aa11.71□□□□□ -0.53
USP3-205ENST00000557884 IGHV1-8P0DP01 117 aa11.71□□□□□ -0.53
USP3-205ENST00000557884 CDK2P24941 298 aa11.71□□□□□ -0.53
USP3-205ENST00000557884 CFPP27918 469 aa11.71□□□□□ -0.53
USP3-205ENST00000557884 GDNFP39905 211 aa11.71□□□□□ -0.53
USP3-205ENST00000557884 RANBP1P43487 201 aa11.71□□□□□ -0.53
USP3-205ENST00000557884 VEGFCP49767 419 aa11.71□□□□□ -0.53
USP3-205ENST00000557884 NCS1P62166 190 aa11.71□□□□□ -0.53
USP3-205ENST00000557884 GUCA2AQ02747 115 aa11.71□□□□□ -0.53
USP3-205ENST00000557884 RBM39Q14498 530 aaKnown RBP11.71□□□□□ -0.53
USP3-205ENST00000557884 DEFB112Q30KQ8 113 aa11.71□□□□□ -0.53
USP3-205ENST00000557884 SLC35E4Q6ICL7 350 aa11.71□□□□□ -0.53
USP3-205ENST00000557884 BAIAP2L2Q6UXY1 529 aa11.71□□□□□ -0.53
USP3-205ENST00000557884 ZNF497Q6ZNH5 498 aa11.71□□□□□ -0.53
USP3-205ENST00000557884 C6orf201Q7Z4U5 140 aa11.71□□□□□ -0.53
USP3-205ENST00000557884 SULT4A1Q9BR01 284 aa11.71□□□□□ -0.53
USP3-205ENST00000557884 SUCNR1Q9BXA5 334 aa11.71□□□□□ -0.53
USP3-205ENST00000557884 NAA50Q9GZZ1 169 aaKnown RBP11.71□□□□□ -0.53
USP3-205ENST00000557884 GAL3ST2Q9H3Q3 398 aa11.71□□□□□ -0.53
USP3-205ENST00000557884 HEXA-AS1Q9H8Q6 139 aa11.71□□□□□ -0.53
USP3-205ENST00000557884 RAB22AQ9UL26 194 aa11.71□□□□□ -0.53
USP3-205ENST00000557884 SESN1Q9Y6P5 492 aa11.71□□□□□ -0.53
USP3-205ENST00000557884 FBN1P35555 2871 aaKnown RBP11.7□□□□□ -0.54
USP3-205ENST00000557884 MEIOCA2RUB1 952 aa11.7□□□□□ -0.54
USP3-205ENST00000557884 TCF21O43680 179 aa11.7□□□□□ -0.54
USP3-205ENST00000557884 RBP4P02753 201 aa11.7□□□□□ -0.54
USP3-205ENST00000557884 MT-ND4P03905 459 aa11.7□□□□□ -0.54
USP3-205ENST00000557884 SNRPBP14678 240 aaKnown RBP11.7□□□□□ -0.54
USP3-205ENST00000557884 ALDH3B2P48448 385 aa11.7□□□□□ -0.54
USP3-205ENST00000557884 UBE2E1P51965 193 aa11.7□□□□□ -0.54
USP3-205ENST00000557884 BPIFB3P59826 476 aa11.7□□□□□ -0.54
USP3-205ENST00000557884 PAX5Q02548 391 aa11.7□□□□□ -0.54
USP3-205ENST00000557884 LTC4SQ16873 150 aa11.7□□□□□ -0.54
USP3-205ENST00000557884 C17orf58Q2M2W7 97 aa11.7□□□□□ -0.54
USP3-205ENST00000557884 C9orf139Q6ZV77 190 aa11.7□□□□□ -0.54
USP3-205ENST00000557884 GPR141Q7Z602 305 aa11.7□□□□□ -0.54
USP3-205ENST00000557884 ZNF565Q8N9K5 539 aa11.7□□□□□ -0.54
USP3-205ENST00000557884 OR4K15Q8NH41 348 aa11.7□□□□□ -0.54
USP3-205ENST00000557884 RFESDQ8TAC1 157 aa11.7□□□□□ -0.54
USP3-205ENST00000557884 UBALD1Q8TB05 177 aa11.7□□□□□ -0.54
USP3-205ENST00000557884 FAAP24Q9BTP7 215 aa11.7□□□□□ -0.54
USP3-205ENST00000557884 TAS2R3Q9NYW6 316 aa11.7□□□□□ -0.54
USP3-205ENST00000557884 CALYQ9NYX4 217 aa11.7□□□□□ -0.54
USP3-205ENST00000557884 FBLN5Q9UBX5 448 aa11.7□□□□□ -0.54
USP3-205ENST00000557884 KBTBD11-OT1A0A1B0GTJ5 212 aa11.69□□□□□ -0.54
USP3-205ENST00000557884 ZNF729A6NN14 1252 aaPredicted RBP11.69□□□□□ -0.54
USP3-205ENST00000557884 H3BUI4 141 aa11.69□□□□□ -0.54
USP3-205ENST00000557884 VENTXO95231 258 aa11.69□□□□□ -0.54
USP3-205ENST00000557884 PAHP00439 452 aa11.69□□□□□ -0.54
USP3-205ENST00000557884 GLAP06280 429 aa11.69□□□□□ -0.54
USP3-205ENST00000557884 SSTR5P35346 364 aa11.69□□□□□ -0.54
USP3-205ENST00000557884 SAA4P35542 130 aa11.69□□□□□ -0.54
USP3-205ENST00000557884 SERPINB10P48595 397 aa11.69□□□□□ -0.54
USP3-205ENST00000557884 VBP1P61758 197 aa11.69□□□□□ -0.54
USP3-205ENST00000557884 IDNKQ5T6J7 187 aa11.69□□□□□ -0.54
USP3-205ENST00000557884 GPR107Q5VW38 600 aa11.69□□□□□ -0.54
USP3-205ENST00000557884 HEPN1Q6WQI6 88 aa11.69□□□□□ -0.54
USP3-205ENST00000557884 RBMS3Q6XE24 437 aaKnown RBP11.69□□□□□ -0.54
USP3-205ENST00000557884 SLC16A12Q6ZSM3 486 aa11.69□□□□□ -0.54
USP3-205ENST00000557884 FAM89BQ8N5H3 189 aa11.69□□□□□ -0.54
USP3-205ENST00000557884 OR13D1Q8NGV5 346 aa11.69□□□□□ -0.54
USP3-205ENST00000557884 LGALS14Q8TCE9 139 aa11.69□□□□□ -0.54
USP3-205ENST00000557884 C17orf50Q8WW18 174 aa11.69□□□□□ -0.54
USP3-205ENST00000557884 ZDHHC16Q969W1 377 aa11.69□□□□□ -0.54
USP3-205ENST00000557884 ARHGAP5-AS1Q96IT6 56 aa11.69□□□□□ -0.54
USP3-205ENST00000557884 DUX5Q96PT3 197 aa11.69□□□□□ -0.54
USP3-205ENST00000557884 NCOR1P1Q9H4R4 102 aa11.69□□□□□ -0.54
USP3-205ENST00000557884 PLEKHJ1Q9NW61 149 aa11.69□□□□□ -0.54
USP3-205ENST00000557884 TRAPPC2LQ9UL33 140 aa11.69□□□□□ -0.54
USP3-205ENST00000557884 IL1AP01583 271 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms