RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 KRT84Q9NSB2 600 aa9.39□□□□□ -0.91
PSEN1-220ENST00000557037 IL20Q9NYY1 176 aa9.39□□□□□ -0.91
PSEN1-220ENST00000557037 NUFIP1Q9UHK0 495 aaKnown RBP9.39□□□□□ -0.91
PSEN1-220ENST00000557037 KIF25Q9UIL4 384 aa9.39□□□□□ -0.91
PSEN1-220ENST00000557037 V9GYQ6 96 aa9.39□□□□□ -0.91
PSEN1-220ENST00000557037 V9GYS6 101 aa9.39□□□□□ -0.91
PSEN1-220ENST00000557037 MEIKINA0A087WXM9 373 aa9.38□□□□□ -0.91
PSEN1-220ENST00000557037 TRAV39A0A0B4J263 110 aa9.38□□□□□ -0.91
PSEN1-220ENST00000557037 A0A1B0GTI1 187 aa9.38□□□□□ -0.91
PSEN1-220ENST00000557037 ZNF785A8K8V0 405 aa9.38□□□□□ -0.91
PSEN1-220ENST00000557037 NPPAP01160 153 aa9.38□□□□□ -0.91
PSEN1-220ENST00000557037 HLA-DRB1P01911 266 aa9.38□□□□□ -0.91
PSEN1-220ENST00000557037 ZNF3P17036 446 aa9.38□□□□□ -0.91
PSEN1-220ENST00000557037 C19orf54Q5BKX5 351 aa9.38□□□□□ -0.91
PSEN1-220ENST00000557037 SAMD4BQ5PRF9 694 aaKnown RBP9.38□□□□□ -0.91
PSEN1-220ENST00000557037 MRGPRDQ8TDS7 321 aa9.38□□□□□ -0.91
PSEN1-220ENST00000557037 RITA1Q96K30 269 aa9.38□□□□□ -0.91
PSEN1-220ENST00000557037 GGTLC1Q9BX51 225 aa9.38□□□□□ -0.91
PSEN1-220ENST00000557037 ANKRD60Q9BZ19 345 aa9.38□□□□□ -0.91
PSEN1-220ENST00000557037 RANGRFQ9HD47 186 aaPredicted RBP9.38□□□□□ -0.91
PSEN1-220ENST00000557037 HMG20AQ9NP66 347 aa9.38□□□□□ -0.91
PSEN1-220ENST00000557037 ARMC1Q9NVT9 282 aa9.38□□□□□ -0.91
PSEN1-220ENST00000557037 LAMP5Q9UJQ1 280 aa9.38□□□□□ -0.91
PSEN1-220ENST00000557037 APOBP04114 4563 aaKnown RBP9.38□□□□□ -0.91
PSEN1-220ENST00000557037 MSGN1A6NI15 193 aa9.37□□□□□ -0.91
PSEN1-220ENST00000557037 PRR32B1ATL7 298 aa9.37□□□□□ -0.91
PSEN1-220ENST00000557037 SLC33A1O00400 549 aaPredicted RBP9.37□□□□□ -0.91
PSEN1-220ENST00000557037 HSPB6O14558 160 aa9.37□□□□□ -0.91
PSEN1-220ENST00000557037 SOX14O95416 240 aa9.37□□□□□ -0.91
PSEN1-220ENST00000557037 CSN2P05814 226 aa9.37□□□□□ -0.91
PSEN1-220ENST00000557037 ALOX5APP20292 161 aa9.37□□□□□ -0.91
PSEN1-220ENST00000557037 C21orf33P30042 268 aaPredicted RBP9.37□□□□□ -0.91
PSEN1-220ENST00000557037 SSTR5P35346 364 aa9.37□□□□□ -0.91
PSEN1-220ENST00000557037 FUT6P51993 359 aa9.37□□□□□ -0.91
PSEN1-220ENST00000557037 DYRK1AQ13627 763 aa9.37□□□□□ -0.91
PSEN1-220ENST00000557037 APOFQ13790 326 aa9.37□□□□□ -0.91
PSEN1-220ENST00000557037 GUCA2BQ16661 112 aa9.37□□□□□ -0.91
PSEN1-220ENST00000557037 CD300EQ496F6 205 aaPredicted RBP9.37□□□□□ -0.91
PSEN1-220ENST00000557037 ZNF565Q8N9K5 539 aa9.37□□□□□ -0.91
PSEN1-220ENST00000557037 OR9Q2Q8NGE9 314 aa9.37□□□□□ -0.91
PSEN1-220ENST00000557037 ABHD5Q8WTS1 349 aa9.37□□□□□ -0.91
PSEN1-220ENST00000557037 BORCS8Q96FH0 119 aa9.37□□□□□ -0.91
PSEN1-220ENST00000557037 LINC00574Q9H8X3 128 aa9.37□□□□□ -0.91
PSEN1-220ENST00000557037 INTS9Q9NV88 658 aaKnown RBP9.37□□□□□ -0.91
PSEN1-220ENST00000557037 GID8Q9NWU2 228 aa9.37□□□□□ -0.91
PSEN1-220ENST00000557037 FBXL17Q9UF56 701 aa9.37□□□□□ -0.91
PSEN1-220ENST00000557037 NPIPB11E5RHQ5 1161 aa9.36□□□□□ -0.91
PSEN1-220ENST00000557037 SPRY2O43597 315 aa9.36□□□□□ -0.91
PSEN1-220ENST00000557037 CYB5AP00167 134 aa9.36□□□□□ -0.91
PSEN1-220ENST00000557037 ATF4P18848 351 aaPredicted RBP9.36□□□□□ -0.91
PSEN1-220ENST00000557037 MECP2P51608 486 aaKnown RBP9.36□□□□□ -0.91
PSEN1-220ENST00000557037 MAGOHP61326 146 aaKnown RBP9.36□□□□□ -0.91
PSEN1-220ENST00000557037 SF3A3Q12874 501 aaKnown RBP eCLIP9.36□□□□□ -0.91
PSEN1-220ENST00000557037 RBMY1FQ15415 496 aaKnown RBP9.36□□□□□ -0.91
PSEN1-220ENST00000557037 ZNF829Q3KNS6 432 aaPredicted RBP9.36□□□□□ -0.91
PSEN1-220ENST00000557037 COQ5Q5HYK3 327 aa9.36□□□□□ -0.91
PSEN1-220ENST00000557037 Q6P435 159 aa9.36□□□□□ -0.91
PSEN1-220ENST00000557037 SLC16A12Q6ZSM3 486 aa9.36□□□□□ -0.91
PSEN1-220ENST00000557037 TMEM179BQ7Z7N9 219 aa9.36□□□□□ -0.91
PSEN1-220ENST00000557037 WFDC3Q8IUB2 231 aa9.36□□□□□ -0.91
PSEN1-220ENST00000557037 RDH10Q8IZV5 341 aa9.36□□□□□ -0.91
PSEN1-220ENST00000557037 OR2T33Q8NG76 320 aa9.36□□□□□ -0.91
PSEN1-220ENST00000557037 UBALD1Q8TB05 177 aa9.36□□□□□ -0.91
PSEN1-220ENST00000557037 BAIAP2Q9UQB8 552 aa9.36□□□□□ -0.91
PSEN1-220ENST00000557037 ERGIC3Q9Y282 383 aa9.36□□□□□ -0.91
PSEN1-220ENST00000557037 M0R2N4 97 aa9.35□□□□□ -0.91
PSEN1-220ENST00000557037 DEGS1O15121 323 aa9.35□□□□□ -0.91
PSEN1-220ENST00000557037 MITFO75030 526 aaPredicted RBP9.35□□□□□ -0.91
PSEN1-220ENST00000557037 TRGV3P03979 118 aa9.35□□□□□ -0.91
PSEN1-220ENST00000557037 IL3RAP26951 378 aa9.35□□□□□ -0.91
PSEN1-220ENST00000557037 RRM2P31350 389 aa9.35□□□□□ -0.91
PSEN1-220ENST00000557037 BMI1P35226 326 aa9.35□□□□□ -0.91
PSEN1-220ENST00000557037 NANOS2P60321 138 aaKnown RBP9.35□□□□□ -0.91
PSEN1-220ENST00000557037 ACTBP60709 375 aa9.35□□□□□ -0.91
PSEN1-220ENST00000557037 ODF4Q2M2E3 257 aa9.35□□□□□ -0.91
PSEN1-220ENST00000557037 DEFB135Q30KP9 77 aa9.35□□□□□ -0.91
PSEN1-220ENST00000557037 ACTBL2Q562R1 376 aa9.35□□□□□ -0.91
PSEN1-220ENST00000557037 BCL2L15Q5TBC7 163 aa9.35□□□□□ -0.91
PSEN1-220ENST00000557037 LIN54Q6MZP7 749 aa9.35□□□□□ -0.91
PSEN1-220ENST00000557037 RASSF6Q6ZTQ3 369 aa9.35□□□□□ -0.91
PSEN1-220ENST00000557037 LAX1Q8IWV1 398 aa9.35□□□□□ -0.91
PSEN1-220ENST00000557037 Q8N1X5 172 aa9.35□□□□□ -0.91
PSEN1-220ENST00000557037 IQCF1Q8N6M8 205 aa9.35□□□□□ -0.91
PSEN1-220ENST00000557037 TMEM217Q8N7C4 229 aa9.35□□□□□ -0.91
PSEN1-220ENST00000557037 ZNF645Q8N7E2 425 aa9.35□□□□□ -0.91
PSEN1-220ENST00000557037 GVQW1Q8N7I0 195 aa9.35□□□□□ -0.91
PSEN1-220ENST00000557037 BTBD10Q9BSF8 475 aa9.35□□□□□ -0.91
PSEN1-220ENST00000557037 MROQ9BYG7 248 aa9.35□□□□□ -0.91
PSEN1-220ENST00000557037 SCRT2Q9NQ03 307 aa9.35□□□□□ -0.91
PSEN1-220ENST00000557037 CMC2Q9NRP2 79 aa9.35□□□□□ -0.91
PSEN1-220ENST00000557037 CNOT2Q9NZN8 540 aaKnown RBP9.35□□□□□ -0.91
PSEN1-220ENST00000557037 LRP1BQ9NZR2 4599 aa9.34□□□□□ -0.91
PSEN1-220ENST00000557037 LOC102724200A0A096LPH7 203 aaPredicted RBP9.34□□□□□ -0.91
PSEN1-220ENST00000557037 IGHV3-43A0A0B4J1X8 118 aa9.34□□□□□ -0.91
PSEN1-220ENST00000557037 IGKV1-12A0A0C4DH73 117 aa9.34□□□□□ -0.91
PSEN1-220ENST00000557037 BBIP1A8MTZ0 92 aa9.34□□□□□ -0.91
PSEN1-220ENST00000557037 LOC110117498-PIK3R3F6TDL0 507 aa9.34□□□□□ -0.91
PSEN1-220ENST00000557037 NME4O00746 187 aa9.34□□□□□ -0.91
PSEN1-220ENST00000557037 SLC31A2O15432 143 aa9.34□□□□□ -0.91
PSEN1-220ENST00000557037 GASTP01350 101 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms