RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 MIXL1Q9H2W2 232 aa2.89□□□□□ -1.95
PRPF39-210ENST00000556718 ACOT13Q9NPJ3 140 aa2.89□□□□□ -1.95
PRPF39-210ENST00000556718 RBFOX1Q9NWB1 397 aaKnown RBP2.89□□□□□ -1.95
PRPF39-210ENST00000556718 MTFP1Q9UDX5 166 aa2.89□□□□□ -1.95
PRPF39-210ENST00000556718 ZNF222Q9UK12 451 aa2.89□□□□□ -1.95
PRPF39-210ENST00000556718 ALG5Q9Y673 324 aa2.89□□□□□ -1.95
PRPF39-210ENST00000556718 MYH6P13533 1939 aa2.89□□□□□ -1.95
PRPF39-210ENST00000556718 PPLO60437 1756 aa2.89□□□□□ -1.95
PRPF39-210ENST00000556718 ZNFX1Q9P2E3 1918 aaKnown RBP2.88□□□□□ -1.95
PRPF39-210ENST00000556718 A0A1B0GUL6 1792 aa2.88□□□□□ -1.95
PRPF39-210ENST00000556718 hCG_1818297A0A087WSY0 165 aa2.88□□□□□ -1.95
PRPF39-210ENST00000556718 TRAV19A0A0A6YYK7 116 aa2.88□□□□□ -1.95
PRPF39-210ENST00000556718 IGHV5-51A0A0C4DH38 117 aa2.88□□□□□ -1.95
PRPF39-210ENST00000556718 PRORSD1PA6NEY8 169 aa2.88□□□□□ -1.95
PRPF39-210ENST00000556718 TSTD3H0UI37 97 aa2.88□□□□□ -1.95
PRPF39-210ENST00000556718 APOC4-APOC2K7ER74 178 aa2.88□□□□□ -1.95
PRPF39-210ENST00000556718 PRMT5O14744 637 aaPredicted RBP2.88□□□□□ -1.95
PRPF39-210ENST00000556718 TPST1O60507 370 aa2.88□□□□□ -1.95
PRPF39-210ENST00000556718 SC5DO75845 299 aa2.88□□□□□ -1.95
PRPF39-210ENST00000556718 RBBP9O75884 186 aa2.88□□□□□ -1.95
PRPF39-210ENST00000556718 IFNGP01579 166 aa2.88□□□□□ -1.95
PRPF39-210ENST00000556718 APOC2P02655 101 aa2.88□□□□□ -1.95
PRPF39-210ENST00000556718 BCHEP06276 602 aa2.88□□□□□ -1.95
PRPF39-210ENST00000556718 HOXC4P09017 264 aaPredicted RBP2.88□□□□□ -1.95
PRPF39-210ENST00000556718 PGA5P0DJD9 388 aa2.88□□□□□ -1.95
PRPF39-210ENST00000556718 CD37P11049 281 aa2.88□□□□□ -1.95
PRPF39-210ENST00000556718 SLC2A1P11166 492 aa2.88□□□□□ -1.95
PRPF39-210ENST00000556718 CRABP1P29762 137 aa2.88□□□□□ -1.95
PRPF39-210ENST00000556718 LCN1P31025 176 aa2.88□□□□□ -1.95
PRPF39-210ENST00000556718 SSTR5P35346 364 aa2.88□□□□□ -1.95
PRPF39-210ENST00000556718 ARR3P36575 388 aa2.88□□□□□ -1.95
PRPF39-210ENST00000556718 CRATP43155 626 aa2.88□□□□□ -1.95
PRPF39-210ENST00000556718 MAGEA6P43360 314 aa2.88□□□□□ -1.95
PRPF39-210ENST00000556718 RGS6P49758 472 aa2.88□□□□□ -1.95
PRPF39-210ENST00000556718 RBP2P50120 134 aa2.88□□□□□ -1.95
PRPF39-210ENST00000556718 SYNJ2BPP57105 145 aa2.88□□□□□ -1.95
PRPF39-210ENST00000556718 DNAJB13P59910 316 aa2.88□□□□□ -1.95
PRPF39-210ENST00000556718 NCS1P62166 190 aa2.88□□□□□ -1.95
PRPF39-210ENST00000556718 RAP1AP62834 184 aa2.88□□□□□ -1.95
PRPF39-210ENST00000556718 PPP3R1P63098 170 aa2.88□□□□□ -1.95
PRPF39-210ENST00000556718 GLO1Q04760 184 aa2.88□□□□□ -1.95
PRPF39-210ENST00000556718 TSNQ15631 228 aaKnown RBP2.88□□□□□ -1.95
PRPF39-210ENST00000556718 RSPO1Q2MKA7 263 aaPredicted RBP2.88□□□□□ -1.95
PRPF39-210ENST00000556718 ZNF658BQ4V348 819 aaPredicted RBP2.88□□□□□ -1.95
PRPF39-210ENST00000556718 GCSAMLQ5JQS6 135 aa2.88□□□□□ -1.95
PRPF39-210ENST00000556718 SPANXN3Q5MJ09 141 aa2.88□□□□□ -1.95
PRPF39-210ENST00000556718 NXNL2Q5VZ03 156 aa2.88□□□□□ -1.95
PRPF39-210ENST00000556718 DNAJC24Q6P3W2 148 aa2.88□□□□□ -1.95
PRPF39-210ENST00000556718 FAM183BPQ6ZVS7 135 aa2.88□□□□□ -1.95
PRPF39-210ENST00000556718 PHF13Q86YI8 300 aaPredicted RBP2.88□□□□□ -1.95
PRPF39-210ENST00000556718 ENTHD1Q8IYW4 607 aa2.88□□□□□ -1.95
PRPF39-210ENST00000556718 SLC34A3Q8N130 599 aa2.88□□□□□ -1.95
PRPF39-210ENST00000556718 ZNF561Q8N587 486 aa2.88□□□□□ -1.95
PRPF39-210ENST00000556718 CLDN22Q8N7P3 220 aa2.88□□□□□ -1.95
PRPF39-210ENST00000556718 OR4M2Q8NGB6 313 aa2.88□□□□□ -1.95
PRPF39-210ENST00000556718 OR5J2Q8NH18 312 aa2.88□□□□□ -1.95
PRPF39-210ENST00000556718 ZNF461Q8TAF7 563 aa2.88□□□□□ -1.95
PRPF39-210ENST00000556718 ASB13Q8WXK3 278 aa2.88□□□□□ -1.95
PRPF39-210ENST00000556718 TMBIM1Q969X1 311 aa2.88□□□□□ -1.95
PRPF39-210ENST00000556718 ZNF681Q96N22 645 aa2.88□□□□□ -1.95
PRPF39-210ENST00000556718 TIMM17AQ99595 171 aa2.88□□□□□ -1.95
PRPF39-210ENST00000556718 RBBP8Q99708 897 aa2.88□□□□□ -1.95
PRPF39-210ENST00000556718 KCNS3Q9BQ31 491 aa2.88□□□□□ -1.95
PRPF39-210ENST00000556718 MRPL57Q9BQC6 102 aaKnown RBP2.88□□□□□ -1.95
PRPF39-210ENST00000556718 AGMATQ9BSE5 352 aa2.88□□□□□ -1.95
PRPF39-210ENST00000556718 MARVELD1Q9BSK0 173 aa2.88□□□□□ -1.95
PRPF39-210ENST00000556718 SRRQ9GZT4 340 aa2.88□□□□□ -1.95
PRPF39-210ENST00000556718 METTL9Q9H1A3 318 aa2.88□□□□□ -1.95
PRPF39-210ENST00000556718 WDR55Q9H6Y2 383 aaPredicted RBP2.88□□□□□ -1.95
PRPF39-210ENST00000556718 REEP1Q9H902 201 aa2.88□□□□□ -1.95
PRPF39-210ENST00000556718 TMEM138Q9NPI0 162 aa2.88□□□□□ -1.95
PRPF39-210ENST00000556718 ZNF331Q9NQX6 463 aaPredicted RBP2.88□□□□□ -1.95
PRPF39-210ENST00000556718 AGPAT3Q9NRZ7 376 aa2.88□□□□□ -1.95
PRPF39-210ENST00000556718 DMAC2Q9NW81 257 aa2.88□□□□□ -1.95
PRPF39-210ENST00000556718 NEU3Q9UQ49 428 aa2.88□□□□□ -1.95
PRPF39-210ENST00000556718 SLC22A7Q9Y694 548 aa2.88□□□□□ -1.95
PRPF39-210ENST00000556718 ALKQ9UM73 1620 aa2.88□□□□□ -1.95
PRPF39-210ENST00000556718 SCN4AP35499 1836 aa2.88□□□□□ -1.95
PRPF39-210ENST00000556718 PSME4Q14997 1843 aa2.88□□□□□ -1.95
PRPF39-210ENST00000556718 KIF13AQ9H1H9 1805 aa2.88□□□□□ -1.95
PRPF39-210ENST00000556718 MYO5BQ9ULV0 1848 aa2.88□□□□□ -1.95
PRPF39-210ENST00000556718 COL4A4P53420 1690 aaPredicted RBP2.88□□□□□ -1.95
PRPF39-210ENST00000556718 PTPRJQ12913 1337 aa2.88□□□□□ -1.95
PRPF39-210ENST00000556718 LTBP1Q14766 1721 aa2.88□□□□□ -1.95
PRPF39-210ENST00000556718 TMEM2Q9UHN6 1383 aa2.87□□□□□ -1.95
PRPF39-210ENST00000556718 DCCP43146 1447 aa2.87□□□□□ -1.95
PRPF39-210ENST00000556718 LRP6O75581 1613 aa2.87□□□□□ -1.95
PRPF39-210ENST00000556718 ATAD5Q96QE3 1844 aa2.87□□□□□ -1.95
PRPF39-210ENST00000556718 SCN2AQ99250 2005 aa2.87□□□□□ -1.95
PRPF39-210ENST00000556718 IGLV1-50A0A075B6I6 118 aa2.87□□□□□ -1.95
PRPF39-210ENST00000556718 IGHV3OR16-9A0A0B4J2B5 98 aa2.87□□□□□ -1.95
PRPF39-210ENST00000556718 A0A1W2PP18 115 aa2.87□□□□□ -1.95
PRPF39-210ENST00000556718 WI2-2373I1.2A0A1W2PRP0 233 aa2.87□□□□□ -1.95
PRPF39-210ENST00000556718 IRGMA1A4Y4 181 aa2.87□□□□□ -1.95
PRPF39-210ENST00000556718 DISC1C4P0D8 188 aa2.87□□□□□ -1.95
PRPF39-210ENST00000556718 HSBP1L1C9JCN9 74 aa2.87□□□□□ -1.95
PRPF39-210ENST00000556718 C11orf94C9JXX5 98 aa2.87□□□□□ -1.95
PRPF39-210ENST00000556718 M0QZ92 97 aa2.87□□□□□ -1.95
PRPF39-210ENST00000556718 M0QZK8 103 aa2.87□□□□□ -1.95
PRPF39-210ENST00000556718 DNASE2O00115 360 aaPredicted RBP2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms