RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 AADACL2Q6P093 401 aa5.33□□□□□ -1.56
TDP1-215ENST00000556498 ZNF343Q6P1L6 599 aa5.33□□□□□ -1.56
TDP1-215ENST00000556498 Q6ZSR9 355 aa5.33□□□□□ -1.56
TDP1-215ENST00000556498 ASCL5Q7RTU5 278 aa5.33□□□□□ -1.56
TDP1-215ENST00000556498 CDC20BQ86Y33 519 aa5.33□□□□□ -1.56
TDP1-215ENST00000556498 OSR2Q8N2R0 312 aa5.33□□□□□ -1.56
TDP1-215ENST00000556498 KIR3DL3Q8N743 410 aa5.33□□□□□ -1.56
TDP1-215ENST00000556498 SYT8Q8NBV8 401 aa5.33□□□□□ -1.56
TDP1-215ENST00000556498 FAM110DQ8TAY7 271 aaPredicted RBP5.33□□□□□ -1.56
TDP1-215ENST00000556498 DERL3Q96Q80 235 aa5.33□□□□□ -1.56
TDP1-215ENST00000556498 HIST1H2AAQ96QV6 131 aa5.33□□□□□ -1.56
TDP1-215ENST00000556498 HCAR1Q9BXC0 346 aa5.33□□□□□ -1.56
TDP1-215ENST00000556498 CHST8Q9H2A9 424 aa5.33□□□□□ -1.56
TDP1-215ENST00000556498 ZNF226Q9NYT6 803 aa5.33□□□□□ -1.56
TDP1-215ENST00000556498 ASF1AQ9Y294 204 aa5.33□□□□□ -1.56
TDP1-215ENST00000556498 LOXL2Q9Y4K0 774 aa5.33□□□□□ -1.56
TDP1-215ENST00000556498 IER3IP1Q9Y5U9 82 aa5.33□□□□□ -1.56
TDP1-215ENST00000556498 SOX21Q9Y651 276 aaPredicted RBP5.33□□□□□ -1.56
TDP1-215ENST00000556498 LTN1O94822 1766 aa5.33□□□□□ -1.56
TDP1-215ENST00000556498 ANKRD36CQ5JPF3 1778 aa5.33□□□□□ -1.56
TDP1-215ENST00000556498 ALS2Q96Q42 1657 aa5.33□□□□□ -1.56
TDP1-215ENST00000556498 PEAK1Q9H792 1746 aa5.32□□□□□ -1.56
TDP1-215ENST00000556498 KLF18A0A0U1RQI7 1052 aa5.32□□□□□ -1.56
TDP1-215ENST00000556498 IRGMA1A4Y4 181 aa5.32□□□□□ -1.56
TDP1-215ENST00000556498 OTOL1A6NHN0 477 aaPredicted RBP5.32□□□□□ -1.56
TDP1-215ENST00000556498 FAM90A7PA6NKC0 464 aa5.32□□□□□ -1.56
TDP1-215ENST00000556498 CD300LBA8K4G0 201 aa5.32□□□□□ -1.56
TDP1-215ENST00000556498 NPIPB5A8MRT5 1133 aa5.32□□□□□ -1.56
TDP1-215ENST00000556498 FAM90A22PA8MWA6 464 aa5.32□□□□□ -1.56
TDP1-215ENST00000556498 FAM90A12PA8MX19 464 aa5.32□□□□□ -1.56
TDP1-215ENST00000556498 FAM90A23PA8MXZ1 464 aa5.32□□□□□ -1.56
TDP1-215ENST00000556498 J3KR12 359 aa5.32□□□□□ -1.56
TDP1-215ENST00000556498 NME4O00746 187 aa5.32□□□□□ -1.56
TDP1-215ENST00000556498 TAX1BP3O14907 124 aa5.32□□□□□ -1.56
TDP1-215ENST00000556498 CHST1O43916 411 aa5.32□□□□□ -1.56
TDP1-215ENST00000556498 YPEL1O60688 119 aa5.32□□□□□ -1.56
TDP1-215ENST00000556498 CLDN11O75508 207 aa5.32□□□□□ -1.56
TDP1-215ENST00000556498 EEDO75530 441 aaKnown RBP5.32□□□□□ -1.56
TDP1-215ENST00000556498 UBL3O95164 117 aa5.32□□□□□ -1.56
TDP1-215ENST00000556498 GASTP01350 101 aa5.32□□□□□ -1.56
TDP1-215ENST00000556498 GAPDHP04406 335 aaKnown RBP5.32□□□□□ -1.56
TDP1-215ENST00000556498 NGFRP08138 427 aa5.32□□□□□ -1.56
TDP1-215ENST00000556498 PVRP15151 417 aa5.32□□□□□ -1.56
TDP1-215ENST00000556498 TSPOP30536 169 aa5.32□□□□□ -1.56
TDP1-215ENST00000556498 SRIP30626 198 aa5.32□□□□□ -1.56
TDP1-215ENST00000556498 PGGT1BP53609 377 aa5.32□□□□□ -1.56
TDP1-215ENST00000556498 EMP1P54849 157 aa5.32□□□□□ -1.56
TDP1-215ENST00000556498 TNFAIP6P98066 277 aaPredicted RBP5.32□□□□□ -1.56
TDP1-215ENST00000556498 ACSM2AQ08AH3 577 aa5.32□□□□□ -1.56
TDP1-215ENST00000556498 CDKN3Q16667 212 aa5.32□□□□□ -1.56
TDP1-215ENST00000556498 LRRC75BQ2VPJ9 315 aa5.32□□□□□ -1.56
TDP1-215ENST00000556498 TDRG1Q3Y452 100 aa5.32□□□□□ -1.56
TDP1-215ENST00000556498 PRR30Q53SZ7 412 aaPredicted RBP5.32□□□□□ -1.56
TDP1-215ENST00000556498 FAM182AQ5T1J6 154 aa5.32□□□□□ -1.56
TDP1-215ENST00000556498 TEX36Q5VZQ5 186 aa5.32□□□□□ -1.56
TDP1-215ENST00000556498 ACSM2BQ68CK6 577 aa5.32□□□□□ -1.56
TDP1-215ENST00000556498 TNFAIP8L2Q6P589 184 aaPredicted RBP5.32□□□□□ -1.56
TDP1-215ENST00000556498 GLIPR1L1Q6UWM5 242 aa5.32□□□□□ -1.56
TDP1-215ENST00000556498 TMEM91Q6ZNR0 172 aa5.32□□□□□ -1.56
TDP1-215ENST00000556498 PGBD5Q8N414 524 aa5.32□□□□□ -1.56
TDP1-215ENST00000556498 ZDHHC22Q8N966 263 aa5.32□□□□□ -1.56
TDP1-215ENST00000556498 THEM6Q8WUY1 208 aa5.32□□□□□ -1.56
TDP1-215ENST00000556498 TMEM170AQ8WVE7 144 aa5.32□□□□□ -1.56
TDP1-215ENST00000556498 TMED6Q8WW62 240 aa5.32□□□□□ -1.56
TDP1-215ENST00000556498 ZNRF4Q8WWF5 429 aa5.32□□□□□ -1.56
TDP1-215ENST00000556498 NEU4Q8WWR8 484 aaPredicted RBP5.32□□□□□ -1.56
TDP1-215ENST00000556498 SLC25A28Q96A46 364 aa5.32□□□□□ -1.56
TDP1-215ENST00000556498 SARAFQ96BY9 339 aa5.32□□□□□ -1.56
TDP1-215ENST00000556498 ZNF681Q96N22 645 aa5.32□□□□□ -1.56
TDP1-215ENST00000556498 YPEL2Q96QA6 119 aa5.32□□□□□ -1.56
TDP1-215ENST00000556498 GPHA2Q96T91 129 aa5.32□□□□□ -1.56
TDP1-215ENST00000556498 SNRNP25Q9BV90 132 aaKnown RBP5.32□□□□□ -1.56
TDP1-215ENST00000556498 VN1R3Q9BXE9 311 aa5.32□□□□□ -1.56
TDP1-215ENST00000556498 FGFBP2Q9BYJ0 223 aa5.32□□□□□ -1.56
TDP1-215ENST00000556498 NPFFR1Q9GZQ6 430 aa5.32□□□□□ -1.56
TDP1-215ENST00000556498 WDR61Q9GZS3 305 aaKnown RBP5.32□□□□□ -1.56
TDP1-215ENST00000556498 OR2D2Q9H210 308 aa5.32□□□□□ -1.56
TDP1-215ENST00000556498 PRORYQ9H606 182 aa5.32□□□□□ -1.56
TDP1-215ENST00000556498 RLIMQ9NVW2 624 aa5.32□□□□□ -1.56
TDP1-215ENST00000556498 THYN1Q9P016 225 aa5.32□□□□□ -1.56
TDP1-215ENST00000556498 SH2B3Q9UQQ2 575 aa5.32□□□□□ -1.56
TDP1-215ENST00000556498 YARS2Q9Y2Z4 477 aaKnown RBP5.32□□□□□ -1.56
TDP1-215ENST00000556498 NHSL1Q5SYE7 1610 aa5.32□□□□□ -1.56
TDP1-215ENST00000556498 PXDNLA1KZ92 1463 aa5.32□□□□□ -1.56
TDP1-215ENST00000556498 RGPD8O14715 1765 aaPredicted RBP5.32□□□□□ -1.56
TDP1-215ENST00000556498 A0A0B4J2E0 115 aa5.31□□□□□ -1.56
TDP1-215ENST00000556498 A0A0G2JLL6 359 aaPredicted RBP5.31□□□□□ -1.56
TDP1-215ENST00000556498 A0A1B0GX12 115 aa5.31□□□□□ -1.56
TDP1-215ENST00000556498 TCRBV9S1A1TA0A576 114 aa5.31□□□□□ -1.56
TDP1-215ENST00000556498 TMEM129A0AVI4 362 aa5.31□□□□□ -1.56
TDP1-215ENST00000556498 MBD3L4A6NDZ8 208 aaPredicted RBP5.31□□□□□ -1.56
TDP1-215ENST00000556498 MBD3L3A6NE82 208 aaPredicted RBP5.31□□□□□ -1.56
TDP1-215ENST00000556498 OR4C46A6NHA9 309 aa5.31□□□□□ -1.56
TDP1-215ENST00000556498 PYCARD-AS1I3L0S3 204 aa5.31□□□□□ -1.56
TDP1-215ENST00000556498 K7EP34 96 aa5.31□□□□□ -1.56
TDP1-215ENST00000556498 SP1P08047 785 aa5.31□□□□□ -1.56
TDP1-215ENST00000556498 SPINK8P0C7L1 97 aa5.31□□□□□ -1.56
TDP1-215ENST00000556498 SEC11BP0C7V7 166 aa5.31□□□□□ -1.56
TDP1-215ENST00000556498 PGA4P0DJD7 388 aa5.31□□□□□ -1.56
TDP1-215ENST00000556498 PGA5P0DJD9 388 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms