RNA–Protein interactions for RNA: ENST00000555550.1

SCFD1-216, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-216ENST00000555550 SPERTQ8NA61 448 aa0.85□□□□□ -2.27
SCFD1-216ENST00000555550 OR6K3Q8NGY3 331 aa0.85□□□□□ -2.27
SCFD1-216ENST00000555550 CCL17Q92583 94 aa0.85□□□□□ -2.27
SCFD1-216ENST00000555550 RORBQ92753 470 aa0.85□□□□□ -2.27
SCFD1-216ENST00000555550 MSANTD3Q96H12 275 aa0.85□□□□□ -2.27
SCFD1-216ENST00000555550 HBEGFQ99075 208 aa0.85□□□□□ -2.27
SCFD1-216ENST00000555550 TSNAXQ99598 290 aaKnown RBP0.85□□□□□ -2.27
SCFD1-216ENST00000555550 ANP32EQ9BTT0 268 aa0.85□□□□□ -2.27
SCFD1-216ENST00000555550 HINT2Q9BX68 163 aa0.85□□□□□ -2.27
SCFD1-216ENST00000555550 SHANK3Q9BYB0 1731 aa0.85□□□□□ -2.27
SCFD1-216ENST00000555550 ULBP1Q9BZM6 244 aa0.85□□□□□ -2.27
SCFD1-216ENST00000555550 SLC19A3Q9BZV2 496 aa0.85□□□□□ -2.27
SCFD1-216ENST00000555550 OR2D2Q9H210 308 aa0.85□□□□□ -2.27
SCFD1-216ENST00000555550 HAUS4Q9H6D7 363 aa0.85□□□□□ -2.27
SCFD1-216ENST00000555550 AGPAT3Q9NRZ7 376 aa0.85□□□□□ -2.27
SCFD1-216ENST00000555550 VPREB3Q9UKI3 123 aa0.85□□□□□ -2.27
SCFD1-216ENST00000555550 SCML1Q9UN30 329 aa0.85□□□□□ -2.27
SCFD1-216ENST00000555550 CFL2Q9Y281 166 aa0.85□□□□□ -2.27
SCFD1-216ENST00000555550 BZW2Q9Y6E2 419 aaKnown RBP0.85□□□□□ -2.27
SCFD1-216ENST00000555550 LCTP09848 1927 aa0.85□□□□□ -2.27
SCFD1-216ENST00000555550 AQRO60306 1485 aaKnown RBP eCLIP0.85□□□□□ -2.272e-9■■■■■ 39.4
SCFD1-216ENST00000555550 NUP153P49790 1475 aaKnown RBP0.85□□□□□ -2.27
SCFD1-216ENST00000555550 ARAP3Q8WWN8 1544 aa0.84□□□□□ -2.27
SCFD1-216ENST00000555550 PIK3R4Q99570 1358 aa0.84□□□□□ -2.27
SCFD1-216ENST00000555550 TRAV8-7A0A075B6U6 113 aa0.84□□□□□ -2.27
SCFD1-216ENST00000555550 A0A1B0GX12 115 aa0.84□□□□□ -2.27
SCFD1-216ENST00000555550 CD300LBA8K4G0 201 aa0.84□□□□□ -2.27
SCFD1-216ENST00000555550 ODF3BA8MYP8 253 aa0.84□□□□□ -2.27
SCFD1-216ENST00000555550 ZNF879B4DU55 563 aa0.84□□□□□ -2.27
SCFD1-216ENST00000555550 MKRN2OSH3BPM6 223 aa0.84□□□□□ -2.27
SCFD1-216ENST00000555550 RLN2P04090 185 aa0.84□□□□□ -2.27
SCFD1-216ENST00000555550 SLC35E2BP0CK96 405 aa0.84□□□□□ -2.27
SCFD1-216ENST00000555550 TAC1P20366 129 aa0.84□□□□□ -2.27
SCFD1-216ENST00000555550 BAXQ07812 192 aa0.84□□□□□ -2.27
SCFD1-216ENST00000555550 IFFO1Q0D2I5 559 aa0.84□□□□□ -2.27
SCFD1-216ENST00000555550 GPR176Q14439 515 aa0.84□□□□□ -2.27
SCFD1-216ENST00000555550 LRRC26Q2I0M4 334 aa0.84□□□□□ -2.27
SCFD1-216ENST00000555550 Q499Y3 187 aa0.84□□□□□ -2.27
SCFD1-216ENST00000555550 TMEM215Q68D42 235 aa0.84□□□□□ -2.27
SCFD1-216ENST00000555550 DUPD1Q68J44 220 aa0.84□□□□□ -2.27
SCFD1-216ENST00000555550 GLYATQ6IB77 296 aa0.84□□□□□ -2.27
SCFD1-216ENST00000555550 TPGS1Q6ZTW0 290 aa0.84□□□□□ -2.27
SCFD1-216ENST00000555550 ZIC4Q8N9L1 334 aa0.84□□□□□ -2.27
SCFD1-216ENST00000555550 DRAXINQ8NBI3 349 aaPredicted RBP0.84□□□□□ -2.27
SCFD1-216ENST00000555550 OR6N2Q8NGY6 317 aa0.84□□□□□ -2.27
SCFD1-216ENST00000555550 ZNF563Q8TA94 476 aa0.84□□□□□ -2.27
SCFD1-216ENST00000555550 DCANP1Q8TF63 244 aa0.84□□□□□ -2.27
SCFD1-216ENST00000555550 TWIST2Q8WVJ9 160 aa0.84□□□□□ -2.27
SCFD1-216ENST00000555550 MAL2Q969L2 176 aa0.84□□□□□ -2.27
SCFD1-216ENST00000555550 HIST1H2BAQ96A08 127 aa0.84□□□□□ -2.27
SCFD1-216ENST00000555550 FAM131CQ96AQ9 280 aa0.84□□□□□ -2.27
SCFD1-216ENST00000555550 ADTRPQ96IZ2 230 aa0.84□□□□□ -2.27
SCFD1-216ENST00000555550 MBOAT7Q96N66 472 aa0.84□□□□□ -2.27
SCFD1-216ENST00000555550 RILPQ96NA2 401 aa0.84□□□□□ -2.27
SCFD1-216ENST00000555550 BIRC8Q96P09 236 aa0.84□□□□□ -2.27
SCFD1-216ENST00000555550 ZNF436Q9C0F3 470 aaPredicted RBP0.84□□□□□ -2.27
SCFD1-216ENST00000555550 COA1Q9GZY4 146 aa0.84□□□□□ -2.27
SCFD1-216ENST00000555550 ANKHQ9HCJ1 492 aa0.84□□□□□ -2.27
SCFD1-216ENST00000555550 ACOT13Q9NPJ3 140 aa0.84□□□□□ -2.27
SCFD1-216ENST00000555550 SLC23A2Q9UGH3 650 aa0.84□□□□□ -2.27
SCFD1-216ENST00000555550 CD300AQ9UGN4 299 aa0.84□□□□□ -2.27
SCFD1-216ENST00000555550 URGCP-MRPS24S4R325 110 aa0.84□□□□□ -2.27
SCFD1-216ENST00000555550 V9GYY9 64 aa0.84□□□□□ -2.27
SCFD1-216ENST00000555550 CACNA1AO00555 2505 aa0.84□□□□□ -2.28
SCFD1-216ENST00000555550 MAP3K19Q56UN5 1328 aa0.84□□□□□ -2.28
SCFD1-216ENST00000555550 AK9Q5TCS8 1911 aa0.83□□□□□ -2.28
SCFD1-216ENST00000555550 ATRNO75882 1429 aa0.83□□□□□ -2.28
SCFD1-216ENST00000555550 LINC00854A0A1B0GVQ3 168 aa0.83□□□□□ -2.28
SCFD1-216ENST00000555550 OR5H14A6NHG9 310 aa0.83□□□□□ -2.28
SCFD1-216ENST00000555550 OR2AT4A6NND4 320 aa0.83□□□□□ -2.28
SCFD1-216ENST00000555550 CENPXA8MT69 81 aa0.83□□□□□ -2.28
SCFD1-216ENST00000555550 C8orf87E5RJ46 101 aa0.83□□□□□ -2.28
SCFD1-216ENST00000555550 E7EWF7 191 aa0.83□□□□□ -2.28
SCFD1-216ENST00000555550 TMEM250H0YL14 139 aa0.83□□□□□ -2.28
SCFD1-216ENST00000555550 K7ERQ8 282 aa0.83□□□□□ -2.28
SCFD1-216ENST00000555550 UPK2O00526 184 aa0.83□□□□□ -2.28
SCFD1-216ENST00000555550 GYG2O15488 501 aa0.83□□□□□ -2.28
SCFD1-216ENST00000555550 YKT6O15498 198 aa0.83□□□□□ -2.28
SCFD1-216ENST00000555550 SGCEO43556 437 aa0.83□□□□□ -2.28
SCFD1-216ENST00000555550 ZNF189O75820 626 aaPredicted RBP0.83□□□□□ -2.28
SCFD1-216ENST00000555550 EPPINO95925 133 aa0.83□□□□□ -2.28
SCFD1-216ENST00000555550 CA2P00918 260 aa0.83□□□□□ -2.28
SCFD1-216ENST00000555550 IGKV5-2P06315 115 aa0.83□□□□□ -2.28
SCFD1-216ENST00000555550 GPX1P07203 203 aa0.83□□□□□ -2.28
SCFD1-216ENST00000555550 PSKH1P11801 424 aa0.83□□□□□ -2.28
SCFD1-216ENST00000555550 GABRA1P14867 456 aa0.83□□□□□ -2.28
SCFD1-216ENST00000555550 M6PRP20645 277 aa0.83□□□□□ -2.28
SCFD1-216ENST00000555550 ELK4P28324 431 aa0.83□□□□□ -2.28
SCFD1-216ENST00000555550 IL12BP29460 328 aa0.83□□□□□ -2.28
SCFD1-216ENST00000555550 CRABP1P29762 137 aa0.83□□□□□ -2.28
SCFD1-216ENST00000555550 TSPOP30536 169 aa0.83□□□□□ -2.28
SCFD1-216ENST00000555550 TAS2R60P59551 318 aa0.83□□□□□ -2.28
SCFD1-216ENST00000555550 KRTAP10-4P60372 401 aaPredicted RBP0.83□□□□□ -2.28
SCFD1-216ENST00000555550 CLEC12AQ5QGZ9 265 aa0.83□□□□□ -2.28
SCFD1-216ENST00000555550 TIMM23BQ5SRD1 257 aa0.83□□□□□ -2.28
SCFD1-216ENST00000555550 C6orf183Q5T699 404 aa0.83□□□□□ -2.28
SCFD1-216ENST00000555550 GALNT10Q86SR1 603 aa0.83□□□□□ -2.28
SCFD1-216ENST00000555550 MARCH3Q86UD3 253 aa0.83□□□□□ -2.28
SCFD1-216ENST00000555550 SELENOHQ8IZQ5 122 aaKnown RBP0.83□□□□□ -2.28
SCFD1-216ENST00000555550 OR6K6Q8NGW6 343 aa0.83□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms