RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 OR1S2Q8NGQ3 325 aa20.61■□□□□ 0.89
TMEM260-207ENST00000555497 BOD1Q96IK1 185 aa20.61■□□□□ 0.89
TMEM260-207ENST00000555497 USB1Q9BQ65 265 aaKnown RBP20.61■□□□□ 0.89
TMEM260-207ENST00000555497 OPN3Q9H1Y3 402 aaPredicted RBP20.61■□□□□ 0.89
TMEM260-207ENST00000555497 RIMS4Q9H426 269 aaPredicted RBP20.61■□□□□ 0.89
TMEM260-207ENST00000555497 K7EPK0 472 aa20.6■□□□□ 0.89
TMEM260-207ENST00000555497 WDR1O75083 606 aa20.6■□□□□ 0.89
TMEM260-207ENST00000555497 SPIN3Q5JUX0 258 aa20.6■□□□□ 0.89
TMEM260-207ENST00000555497 FAM71E2Q8N5Q1 922 aa20.6■□□□□ 0.89
TMEM260-207ENST00000555497 STARD4Q96DR4 205 aa20.6■□□□□ 0.89
TMEM260-207ENST00000555497 TMEM100Q9NV29 134 aa20.6■□□□□ 0.89
TMEM260-207ENST00000555497 AMDHD2Q9Y303 409 aa20.6■□□□□ 0.89
TMEM260-207ENST00000555497 TRAV39A0A0B4J263 110 aa20.59■□□□□ 0.89
TMEM260-207ENST00000555497 TSPAN9O75954 239 aa20.59■□□□□ 0.89
TMEM260-207ENST00000555497 CGAP01215 116 aa20.59■□□□□ 0.89
TMEM260-207ENST00000555497 NRIP2Q9BQI9 281 aa20.59■□□□□ 0.89
TMEM260-207ENST00000555497 DNTTIP1Q9H147 329 aa20.59■□□□□ 0.89
TMEM260-207ENST00000555497 CCL28Q9NRJ3 127 aa20.59■□□□□ 0.89
TMEM260-207ENST00000555497 LAMA5O15230 3695 aa20.59■□□□□ 0.89
TMEM260-207ENST00000555497 KRBOX1C9JBD0 128 aa20.59■□□□□ 0.89
TMEM260-207ENST00000555497 GLAP06280 429 aa20.59■□□□□ 0.89
TMEM260-207ENST00000555497 GRPP07492 148 aa20.59■□□□□ 0.89
TMEM260-207ENST00000555497 FAM157CP0CG43 387 aa20.59■□□□□ 0.89
TMEM260-207ENST00000555497 TMEM268Q5VZI3 342 aa20.59■□□□□ 0.89
TMEM260-207ENST00000555497 C1orf162Q8NEQ5 155 aaPredicted RBP20.59■□□□□ 0.89
TMEM260-207ENST00000555497 PLPPR1Q8TBJ4 325 aa20.59■□□□□ 0.89
TMEM260-207ENST00000555497 TMEM222Q9H0R3 208 aa20.59■□□□□ 0.89
TMEM260-207ENST00000555497 TAS2R3Q9NYW6 316 aa20.59■□□□□ 0.89
TMEM260-207ENST00000555497 TINAGQ9UJW2 476 aa20.59■□□□□ 0.89
TMEM260-207ENST00000555497 PCDHB10Q9UN67 800 aa20.59■□□□□ 0.89
TMEM260-207ENST00000555497 SIRPB1O00241 398 aa20.58■□□□□ 0.89
TMEM260-207ENST00000555497 HSD17B6O14756 317 aa20.58■□□□□ 0.89
TMEM260-207ENST00000555497 OR2H2O95918 312 aa20.58■□□□□ 0.89
TMEM260-207ENST00000555497 CECR9P0C854 216 aa20.58■□□□□ 0.89
TMEM260-207ENST00000555497 PGA5P0DJD9 388 aa20.58■□□□□ 0.89
TMEM260-207ENST00000555497 BTN1A1Q13410 526 aa20.58■□□□□ 0.89
TMEM260-207ENST00000555497 SMCO1Q147U7 214 aa20.58■□□□□ 0.89
TMEM260-207ENST00000555497 FAM185AQ8N0U4 392 aa20.58■□□□□ 0.89
TMEM260-207ENST00000555497 ZNF565Q8N9K5 539 aa20.58■□□□□ 0.89
TMEM260-207ENST00000555497 ZC4H2Q9NQZ6 224 aa20.58■□□□□ 0.89
TMEM260-207ENST00000555497 MGAQ8IWI9 3026 aa20.58■□□□□ 0.89
TMEM260-207ENST00000555497 CEP250Q9BV73 2442 aa20.58■□□□□ 0.88
TMEM260-207ENST00000555497 A0A1B0GW55 424 aa20.58■□□□□ 0.88
TMEM260-207ENST00000555497 GPR31O00270 319 aa20.58■□□□□ 0.88
TMEM260-207ENST00000555497 MLNRO43193 412 aa20.58■□□□□ 0.88
TMEM260-207ENST00000555497 CTXN2P0C2S0 81 aa20.58■□□□□ 0.88
TMEM260-207ENST00000555497 DUX4L2P0CJ85 424 aa20.58■□□□□ 0.88
TMEM260-207ENST00000555497 DUX4L3P0CJ86 424 aa20.58■□□□□ 0.88
TMEM260-207ENST00000555497 DUX4L4P0CJ87 422 aa20.58■□□□□ 0.88
TMEM260-207ENST00000555497 DUX4L5P0CJ88 424 aa20.58■□□□□ 0.88
TMEM260-207ENST00000555497 DUX4L6P0CJ89 424 aa20.58■□□□□ 0.88
TMEM260-207ENST00000555497 DUX4L7P0CJ90 424 aa20.58■□□□□ 0.88
TMEM260-207ENST00000555497 RND3P61587 244 aa20.58■□□□□ 0.88
TMEM260-207ENST00000555497 OR8G1Q15617 311 aa20.58■□□□□ 0.88
TMEM260-207ENST00000555497 IGFL3Q6UXB1 125 aa20.58■□□□□ 0.88
TMEM260-207ENST00000555497 CLEC9AQ6UXN8 241 aa20.58■□□□□ 0.88
TMEM260-207ENST00000555497 BSCL2Q96G97 398 aaPredicted RBP20.58■□□□□ 0.88
TMEM260-207ENST00000555497 RHOFQ9HBH0 211 aa20.58■□□□□ 0.88
TMEM260-207ENST00000555497 DUX4Q9UBX2 424 aa20.58■□□□□ 0.88
TMEM260-207ENST00000555497 K7EM74 188 aa20.57■□□□□ 0.88
TMEM260-207ENST00000555497 SLC33A1O00400 549 aaPredicted RBP20.57■□□□□ 0.88
TMEM260-207ENST00000555497 HOXC12P31275 282 aa20.57■□□□□ 0.88
TMEM260-207ENST00000555497 HLA-DRB3P79483 266 aa20.57■□□□□ 0.88
TMEM260-207ENST00000555497 HOXA4Q00056 320 aaPredicted RBP20.57■□□□□ 0.88
TMEM260-207ENST00000555497 ZNF324BQ6AW86 544 aaPredicted RBP20.57■□□□□ 0.88
TMEM260-207ENST00000555497 ZNF71Q9NQZ8 489 aaPredicted RBP20.57■□□□□ 0.88
TMEM260-207ENST00000555497 ASF1BQ9NVP2 202 aa20.57■□□□□ 0.88
TMEM260-207ENST00000555497 FBXO9Q9UK97 447 aaPredicted RBP20.57■□□□□ 0.88
TMEM260-207ENST00000555497 ZDHHC8Q9ULC8 765 aa20.57■□□□□ 0.88
TMEM260-207ENST00000555497 POLDIP2Q9Y2S7 368 aa20.57■□□□□ 0.88
TMEM260-207ENST00000555497 KIRREL1Q96J84 757 aa20.57■□□□□ 0.88
TMEM260-207ENST00000555497 FBXL17Q9UF56 701 aa20.57■□□□□ 0.88
TMEM260-207ENST00000555497 FZR1Q9UM11 496 aa20.57■□□□□ 0.88
TMEM260-207ENST00000555497 NKX2-6A6NCS4 301 aa20.56■□□□□ 0.88
TMEM260-207ENST00000555497 SIGLEC5O15389 551 aa20.56■□□□□ 0.88
TMEM260-207ENST00000555497 NBL1P41271 181 aa20.56■□□□□ 0.88
TMEM260-207ENST00000555497 OR4A4PQ8NGN8 299 aa20.56■□□□□ 0.88
TMEM260-207ENST00000555497 LILRB1Q8NHL6 650 aaPredicted RBP20.56■□□□□ 0.88
TMEM260-207ENST00000555497 ERGIC1Q969X5 290 aa20.56■□□□□ 0.88
TMEM260-207ENST00000555497 MS4A7Q9GZW8 240 aaPredicted RBP20.56■□□□□ 0.88
TMEM260-207ENST00000555497 GLS2Q9UI32 602 aa20.56■□□□□ 0.88
TMEM260-207ENST00000555497 PURGQ9UJV8 347 aaKnown RBP20.56■□□□□ 0.88
TMEM260-207ENST00000555497 UBE2J1Q9Y385 318 aaPredicted RBP20.56■□□□□ 0.88
TMEM260-207ENST00000555497 TMED3Q9Y3Q3 217 aa20.56■□□□□ 0.88
TMEM260-207ENST00000555497 MUC6Q6W4X9 2439 aa20.56■□□□□ 0.88
TMEM260-207ENST00000555497 GVINP1Q7Z2Y8 2422 aa20.56■□□□□ 0.88
TMEM260-207ENST00000555497 TAAR5O14804 337 aa20.55■□□□□ 0.88
TMEM260-207ENST00000555497 NXPH2O95156 264 aa20.55■□□□□ 0.88
TMEM260-207ENST00000555497 TMEM33P57088 247 aa20.55■□□□□ 0.88
TMEM260-207ENST00000555497 Q8IYB0 196 aa20.55■□□□□ 0.88
TMEM260-207ENST00000555497 OR4D5Q8NGN0 318 aa20.55■□□□□ 0.88
TMEM260-207ENST00000555497 TMEM56Q96MV1 263 aa20.55■□□□□ 0.88
TMEM260-207ENST00000555497 SMIM3Q9BZL3 60 aa20.55■□□□□ 0.88
TMEM260-207ENST00000555497 OBP2BQ9NPH6 170 aa20.55■□□□□ 0.88
TMEM260-207ENST00000555497 PROCRQ9UNN8 238 aa20.55■□□□□ 0.88
TMEM260-207ENST00000555497 TMEM56-RWDD3S4R434 201 aa20.55■□□□□ 0.88
TMEM260-207ENST00000555497 HEATR1Q9H583 2144 aaKnown RBP20.55■□□□□ 0.88
TMEM260-207ENST00000555497 ZNF826PQ6ZT77 177 aa20.55■□□□□ 0.88
TMEM260-207ENST00000555497 C11orf53Q8IXP5 236 aa20.55■□□□□ 0.88
TMEM260-207ENST00000555497 H1FOOQ8IZA3 346 aaPredicted RBP20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms