RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 TMEM158Q8WZ71 300 aa3.12□□□□□ -1.91
SCFD1-211ENST00000554437 CCL17Q92583 94 aa3.12□□□□□ -1.91
SCFD1-211ENST00000554437 FAM210BQ96KR6 192 aa3.12□□□□□ -1.91
SCFD1-211ENST00000554437 HOPXQ9BPY8 73 aaPredicted RBP3.12□□□□□ -1.91
SCFD1-211ENST00000554437 TMEM109Q9BVC6 243 aa3.12□□□□□ -1.91
SCFD1-211ENST00000554437 TAS2R5Q9NYW4 299 aa3.12□□□□□ -1.91
SCFD1-211ENST00000554437 PSG11Q9UQ72 335 aa3.12□□□□□ -1.91
SCFD1-211ENST00000554437 ASTN1O14525 1302 aa3.12□□□□□ -1.91
SCFD1-211ENST00000554437 ARID1AO14497 2285 aa3.12□□□□□ -1.91
SCFD1-211ENST00000554437 PDS5BQ9NTI5 1447 aa3.11□□□□□ -1.91
SCFD1-211ENST00000554437 IGHV6-1A0A0B4J1U7 121 aa3.11□□□□□ -1.91
SCFD1-211ENST00000554437 A0A1B0GV72 72 aa3.11□□□□□ -1.91
SCFD1-211ENST00000554437 PGPA6NDG6 321 aa3.11□□□□□ -1.91
SCFD1-211ENST00000554437 KLRC4O43908 158 aa3.11□□□□□ -1.91
SCFD1-211ENST00000554437 CCDC22O60826 627 aa3.11□□□□□ -1.91
SCFD1-211ENST00000554437 ARL6IP5O75915 188 aa3.11□□□□□ -1.91
SCFD1-211ENST00000554437 GABARAPO95166 117 aa3.11□□□□□ -1.91
SCFD1-211ENST00000554437 EPPINO95925 133 aa3.11□□□□□ -1.91
SCFD1-211ENST00000554437 HAND1O96004 215 aa3.11□□□□□ -1.91
SCFD1-211ENST00000554437 HLA-DPB1P04440 258 aa3.11□□□□□ -1.91
SCFD1-211ENST00000554437 GABRA1P14867 456 aa3.11□□□□□ -1.91
SCFD1-211ENST00000554437 MIPP30301 263 aa3.11□□□□□ -1.91
SCFD1-211ENST00000554437 TMEM33P57088 247 aa3.11□□□□□ -1.91
SCFD1-211ENST00000554437 RAB4BP61018 213 aa3.11□□□□□ -1.91
SCFD1-211ENST00000554437 PSME3P61289 254 aa3.11□□□□□ -1.91
SCFD1-211ENST00000554437 C1DQ13901 141 aaKnown RBP3.11□□□□□ -1.91
SCFD1-211ENST00000554437 FBXL19-AS1Q494R0 122 aa3.11□□□□□ -1.91
SCFD1-211ENST00000554437 Q6ZSR6 202 aa3.11□□□□□ -1.91
SCFD1-211ENST00000554437 OR10D3Q8NH80 312 aa3.11□□□□□ -1.91
SCFD1-211ENST00000554437 DYDC1Q8WWB3 177 aa3.11□□□□□ -1.91
SCFD1-211ENST00000554437 TMBIM1Q969X1 311 aa3.11□□□□□ -1.91
SCFD1-211ENST00000554437 TAMM41Q96BW9 452 aa3.11□□□□□ -1.91
SCFD1-211ENST00000554437 MRPL48Q96GC5 212 aaKnown RBP3.11□□□□□ -1.91
SCFD1-211ENST00000554437 BTF3L4Q96K17 158 aa3.11□□□□□ -1.91
SCFD1-211ENST00000554437 KCNS1Q96KK3 526 aa3.11□□□□□ -1.91
SCFD1-211ENST00000554437 SPACA5Q96QH8 159 aa3.11□□□□□ -1.91
SCFD1-211ENST00000554437 TIMM17AQ99595 171 aa3.11□□□□□ -1.91
SCFD1-211ENST00000554437 MRPL20Q9BYC9 149 aaKnown RBP3.11□□□□□ -1.91
SCFD1-211ENST00000554437 VCXQ9H320 206 aa3.11□□□□□ -1.91
SCFD1-211ENST00000554437 PARVAQ9NVD7 372 aa3.11□□□□□ -1.91
SCFD1-211ENST00000554437 TAS2R7Q9NYW3 318 aa3.11□□□□□ -1.91
SCFD1-211ENST00000554437 C14orf166Q9Y224 244 aaKnown RBP3.11□□□□□ -1.91
SCFD1-211ENST00000554437 SLC22A7Q9Y694 548 aa3.11□□□□□ -1.91
SCFD1-211ENST00000554437 ZBED9Q6R2W3 1325 aa3.11□□□□□ -1.91
SCFD1-211ENST00000554437 IGKV1-27A0A075B6S5 117 aa3.1□□□□□ -1.91
SCFD1-211ENST00000554437 TRAV19A0A0A6YYK7 116 aa3.1□□□□□ -1.91
SCFD1-211ENST00000554437 TEX50A0A1B0GTY4 177 aa3.1□□□□□ -1.91
SCFD1-211ENST00000554437 LOC389332A0A1B0GUA5 103 aa3.1□□□□□ -1.91
SCFD1-211ENST00000554437 GOLGA6L4A6NEF3 574 aa3.1□□□□□ -1.91
SCFD1-211ENST00000554437 BTNL10A8MVZ5 291 aa3.1□□□□□ -1.91
SCFD1-211ENST00000554437 C8orf87E5RJ46 101 aa3.1□□□□□ -1.91
SCFD1-211ENST00000554437 M0R1X1 148 aa3.1□□□□□ -1.91
SCFD1-211ENST00000554437 DNASE2O00115 360 aaPredicted RBP3.1□□□□□ -1.91
SCFD1-211ENST00000554437 CHP2O43745 196 aa3.1□□□□□ -1.91
SCFD1-211ENST00000554437 PLIN3O60664 434 aa3.1□□□□□ -1.91
SCFD1-211ENST00000554437 NOS1APO75052 506 aaPredicted RBP3.1□□□□□ -1.91
SCFD1-211ENST00000554437 CA2P00918 260 aa3.1□□□□□ -1.91
SCFD1-211ENST00000554437 CECR9P0C854 216 aa3.1□□□□□ -1.91
SCFD1-211ENST00000554437 ADRB3P13945 408 aa3.1□□□□□ -1.91
SCFD1-211ENST00000554437 POLR2IP36954 125 aaKnown RBP3.1□□□□□ -1.91
SCFD1-211ENST00000554437 H2BFSP57053 126 aa3.1□□□□□ -1.91
SCFD1-211ENST00000554437 CRADDP78560 199 aa3.1□□□□□ -1.91
SCFD1-211ENST00000554437 LIN52Q52LA3 116 aa3.1□□□□□ -1.91
SCFD1-211ENST00000554437 ACSBG2Q5FVE4 666 aa3.1□□□□□ -1.91
SCFD1-211ENST00000554437 SFXN4Q6P4A7 337 aa3.1□□□□□ -1.91
SCFD1-211ENST00000554437 SLC36A1Q7Z2H8 476 aa3.1□□□□□ -1.91
SCFD1-211ENST00000554437 LINC01551Q86U37 167 aa3.1□□□□□ -1.91
SCFD1-211ENST00000554437 NAA40Q86UY6 237 aa3.1□□□□□ -1.91
SCFD1-211ENST00000554437 MDP1Q86V88 176 aa3.1□□□□□ -1.91
SCFD1-211ENST00000554437 SLC35G3Q8N808 338 aa3.1□□□□□ -1.91
SCFD1-211ENST00000554437 NPBQ8NG41 125 aa3.1□□□□□ -1.91
SCFD1-211ENST00000554437 RASSF5Q8WWW0 418 aa3.1□□□□□ -1.91
SCFD1-211ENST00000554437 NEURL3Q96EH8 262 aa3.1□□□□□ -1.91
SCFD1-211ENST00000554437 OR4K3Q96R72 315 aa3.1□□□□□ -1.91
SCFD1-211ENST00000554437 HSD17B10Q99714 261 aaKnown RBP3.1□□□□□ -1.91
SCFD1-211ENST00000554437 RTBDNQ9BSG5 229 aaPredicted RBP3.1□□□□□ -1.91
SCFD1-211ENST00000554437 HDHD3Q9BSH5 251 aaPredicted RBP3.1□□□□□ -1.91
SCFD1-211ENST00000554437 SLC17A9Q9BYT1 436 aa3.1□□□□□ -1.91
SCFD1-211ENST00000554437 PCBD2Q9H0N5 130 aa3.1□□□□□ -1.91
SCFD1-211ENST00000554437 TXNIPQ9H3M7 391 aa3.1□□□□□ -1.91
SCFD1-211ENST00000554437 CYTL1Q9NRR1 136 aa3.1□□□□□ -1.91
SCFD1-211ENST00000554437 GLS2Q9UI32 602 aa3.1□□□□□ -1.91
SCFD1-211ENST00000554437 HHLA2Q9UM44 414 aa3.1□□□□□ -1.91
SCFD1-211ENST00000554437 INSIG2Q9Y5U4 225 aa3.1□□□□□ -1.91
SCFD1-211ENST00000554437 MTCL1Q9Y4B5 1905 aaKnown RBP3.09□□□□□ -1.91
SCFD1-211ENST00000554437 PCF11O94913 1555 aaKnown RBP3.09□□□□□ -1.91
SCFD1-211ENST00000554437 SCN2AQ99250 2005 aa3.09□□□□□ -1.91
SCFD1-211ENST00000554437 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.09□□□□□ -1.91
SCFD1-211ENST00000554437 IGKV2D-24A0A075B6R9 120 aa3.09□□□□□ -1.91
SCFD1-211ENST00000554437 TRAV8-3A0A0A6YYJ7 113 aa3.09□□□□□ -1.91
SCFD1-211ENST00000554437 IGHV3-74A0A0B4J1X5 117 aa3.09□□□□□ -1.91
SCFD1-211ENST00000554437 IGHV3-64DA0A0J9YX35 117 aa3.09□□□□□ -1.91
SCFD1-211ENST00000554437 FUOMA2VDF0 154 aa3.09□□□□□ -1.91
SCFD1-211ENST00000554437 ZNF705GA8MUZ8 300 aaPredicted RBP3.09□□□□□ -1.91
SCFD1-211ENST00000554437 LAD1O00515 517 aa3.09□□□□□ -1.91
SCFD1-211ENST00000554437 SUPT3HO75486 399 aa3.09□□□□□ -1.91
SCFD1-211ENST00000554437 KCNE1P15382 129 aa3.09□□□□□ -1.91
SCFD1-211ENST00000554437 CD36P16671 472 aa3.09□□□□□ -1.91
SCFD1-211ENST00000554437 CXCL2P19875 107 aa3.09□□□□□ -1.91
SCFD1-211ENST00000554437 CXCL3P19876 107 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms