RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 AP4S1Q9Y587 144 aa3.95□□□□□ -1.78
CKAP4-203ENST00000553039 GMEB1Q9Y692 573 aa3.95□□□□□ -1.78
CKAP4-203ENST00000553039 LHFPL6Q9Y693 200 aa3.95□□□□□ -1.78
CKAP4-203ENST00000553039 HUWE1Q7Z6Z7 4374 aaKnown RBP3.95□□□□□ -1.78
CKAP4-203ENST00000553039 LINC01548A6NM66 108 aa3.94□□□□□ -1.78
CKAP4-203ENST00000553039 EFCAB9A8MZ26 197 aa3.94□□□□□ -1.78
CKAP4-203ENST00000553039 BUB1B-PAK6H3BSN5 160 aa3.94□□□□□ -1.78
CKAP4-203ENST00000553039 CXCR6O00574 342 aa3.94□□□□□ -1.78
CKAP4-203ENST00000553039 XRCC3O43542 346 aa3.94□□□□□ -1.78
CKAP4-203ENST00000553039 IGLV1-51P01701 117 aa3.94□□□□□ -1.78
CKAP4-203ENST00000553039 EGR2P11161 476 aaPredicted RBP3.94□□□□□ -1.78
CKAP4-203ENST00000553039 NCK1P16333 377 aa3.94□□□□□ -1.78
CKAP4-203ENST00000553039 PSMB8P28062 276 aa3.94□□□□□ -1.78
CKAP4-203ENST00000553039 AQP1P29972 269 aa3.94□□□□□ -1.78
CKAP4-203ENST00000553039 VHLP40337 213 aa3.94□□□□□ -1.78
CKAP4-203ENST00000553039 GLIPR1P48060 266 aa3.94□□□□□ -1.78
CKAP4-203ENST00000553039 EDDM3BP56851 147 aa3.94□□□□□ -1.78
CKAP4-203ENST00000553039 GNG3P63215 75 aa3.94□□□□□ -1.78
CKAP4-203ENST00000553039 FAM3AP98173 230 aa3.94□□□□□ -1.78
CKAP4-203ENST00000553039 TNFRSF9Q07011 255 aa3.94□□□□□ -1.78
CKAP4-203ENST00000553039 ST3GAL3Q11203 375 aa3.94□□□□□ -1.78
CKAP4-203ENST00000553039 VMACQ2NL98 169 aa3.94□□□□□ -1.78
CKAP4-203ENST00000553039 VWC2Q2TAL6 325 aa3.94□□□□□ -1.78
CKAP4-203ENST00000553039 SNAI3Q3KNW1 292 aa3.94□□□□□ -1.78
CKAP4-203ENST00000553039 FAM98BQ52LJ0 330 aaKnown RBP3.94□□□□□ -1.78
CKAP4-203ENST00000553039 TPTE2P1Q5T6R2 138 aa3.94□□□□□ -1.78
CKAP4-203ENST00000553039 OTPQ5XKR4 325 aa3.94□□□□□ -1.78
CKAP4-203ENST00000553039 GLYATQ6IB77 296 aa3.94□□□□□ -1.78
CKAP4-203ENST00000553039 SLC18B1Q6NT16 456 aa3.94□□□□□ -1.78
CKAP4-203ENST00000553039 SLC16A9Q7RTY1 509 aa3.94□□□□□ -1.78
CKAP4-203ENST00000553039 ADCK1Q86TW2 530 aa3.94□□□□□ -1.78
CKAP4-203ENST00000553039 TGIF2LXQ8IUE1 241 aa3.94□□□□□ -1.78
CKAP4-203ENST00000553039 RBM45Q8IUH3 476 aaKnown RBP3.94□□□□□ -1.78
CKAP4-203ENST00000553039 NKAIN4Q8IVV8 208 aa3.94□□□□□ -1.78
CKAP4-203ENST00000553039 RNF113BQ8IZP6 322 aaKnown RBP3.94□□□□□ -1.78
CKAP4-203ENST00000553039 CD177Q8N6Q3 437 aa3.94□□□□□ -1.78
CKAP4-203ENST00000553039 OR52L1Q8NGH7 329 aa3.94□□□□□ -1.78
CKAP4-203ENST00000553039 PHLDA1Q8WV24 401 aaPredicted RBP3.94□□□□□ -1.78
CKAP4-203ENST00000553039 PIGCQ92535 297 aa3.94□□□□□ -1.78
CKAP4-203ENST00000553039 ARPC1AQ92747 370 aa3.94□□□□□ -1.78
CKAP4-203ENST00000553039 ITFG2Q969R8 447 aa3.94□□□□□ -1.78
CKAP4-203ENST00000553039 TMEM106AQ96A25 262 aa3.94□□□□□ -1.78
CKAP4-203ENST00000553039 RPEQ96AT9 228 aa3.94□□□□□ -1.78
CKAP4-203ENST00000553039 SGK3Q96BR1 496 aa3.94□□□□□ -1.78
CKAP4-203ENST00000553039 Q96M85 177 aa3.94□□□□□ -1.78
CKAP4-203ENST00000553039 ZNF570Q96NI8 536 aa3.94□□□□□ -1.78
CKAP4-203ENST00000553039 RASL11BQ9BPW5 248 aa3.94□□□□□ -1.78
CKAP4-203ENST00000553039 BARHL1Q9BZE3 327 aa3.94□□□□□ -1.78
CKAP4-203ENST00000553039 ABCG5Q9H222 651 aa3.94□□□□□ -1.78
CKAP4-203ENST00000553039 RGCCQ9H4X1 137 aa3.94□□□□□ -1.78
CKAP4-203ENST00000553039 IKZF5Q9H5V7 419 aa3.94□□□□□ -1.78
CKAP4-203ENST00000553039 GORASP2Q9H8Y8 452 aa3.94□□□□□ -1.78
CKAP4-203ENST00000553039 ARMC1Q9NVT9 282 aa3.94□□□□□ -1.78
CKAP4-203ENST00000553039 CYB5R1Q9UHQ9 305 aa3.94□□□□□ -1.78
CKAP4-203ENST00000553039 B9D1Q9UPM9 204 aa3.94□□□□□ -1.78
CKAP4-203ENST00000553039 SAMD4AQ9UPU9 718 aaKnown RBP3.94□□□□□ -1.78
CKAP4-203ENST00000553039 ERGIC3Q9Y282 383 aa3.94□□□□□ -1.78
CKAP4-203ENST00000553039 RHBDD3Q9Y3P4 386 aa3.94□□□□□ -1.78
CKAP4-203ENST00000553039 A3GALT2U3KPV4 340 aa3.94□□□□□ -1.78
CKAP4-203ENST00000553039 STARD9Q9P2P6 4700 aa3.94□□□□□ -1.78
CKAP4-203ENST00000553039 FRAS1Q86XX4 4008 aa3.93□□□□□ -1.78
CKAP4-203ENST00000553039 CGB1A6NKQ9 187 aa3.93□□□□□ -1.78
CKAP4-203ENST00000553039 CASQ2O14958 399 aaPredicted RBP3.93□□□□□ -1.78
CKAP4-203ENST00000553039 CST4P01036 141 aa3.93□□□□□ -1.78
CKAP4-203ENST00000553039 HSPB1P04792 205 aaKnown RBP3.93□□□□□ -1.78
CKAP4-203ENST00000553039 VPREB1P12018 145 aa3.93□□□□□ -1.78
CKAP4-203ENST00000553039 GPR4P46093 362 aa3.93□□□□□ -1.78
CKAP4-203ENST00000553039 OR1E2P47887 323 aa3.93□□□□□ -1.78
CKAP4-203ENST00000553039 GZMMP51124 257 aa3.93□□□□□ -1.78
CKAP4-203ENST00000553039 RAB9AP51151 201 aa3.93□□□□□ -1.78
CKAP4-203ENST00000553039 PRKXP51817 358 aa3.93□□□□□ -1.78
CKAP4-203ENST00000553039 BLOC1S1P78537 153 aa3.93□□□□□ -1.78
CKAP4-203ENST00000553039 TATDN3Q17R31 274 aa3.93□□□□□ -1.78
CKAP4-203ENST00000553039 ZBED5Q49AG3 693 aa3.93□□□□□ -1.78
CKAP4-203ENST00000553039 LRRC23Q53EV4 343 aaPredicted RBP3.93□□□□□ -1.78
CKAP4-203ENST00000553039 SOHLH1Q5JUK2 328 aa3.93□□□□□ -1.78
CKAP4-203ENST00000553039 LCN12Q6JVE5 192 aa3.93□□□□□ -1.78
CKAP4-203ENST00000553039 IZUMO2Q6UXV1 221 aa3.93□□□□□ -1.78
CKAP4-203ENST00000553039 NOXA1Q86UR1 476 aa3.93□□□□□ -1.78
CKAP4-203ENST00000553039 OR5A2Q8NGI9 324 aa3.93□□□□□ -1.78
CKAP4-203ENST00000553039 CANT1Q8WVQ1 401 aa3.93□□□□□ -1.78
CKAP4-203ENST00000553039 DNAJC9Q8WXX5 260 aa3.93□□□□□ -1.78
CKAP4-203ENST00000553039 SPSB1Q96BD6 273 aa3.93□□□□□ -1.78
CKAP4-203ENST00000553039 REEP6Q96HR9 211 aa3.93□□□□□ -1.78
CKAP4-203ENST00000553039 KCTD7Q96MP8 289 aa3.93□□□□□ -1.78
CKAP4-203ENST00000553039 OR5B12Q96R08 314 aa3.93□□□□□ -1.78
CKAP4-203ENST00000553039 ZNF184Q99676 751 aaPredicted RBP3.93□□□□□ -1.78
CKAP4-203ENST00000553039 AIFM2Q9BRQ8 373 aa3.93□□□□□ -1.78
CKAP4-203ENST00000553039 COPS4Q9BT78 406 aa3.93□□□□□ -1.78
CKAP4-203ENST00000553039 OR51I2Q9H344 312 aa3.93□□□□□ -1.78
CKAP4-203ENST00000553039 C8orf4Q9NR00 106 aa3.93□□□□□ -1.78
CKAP4-203ENST00000553039 SLC2A8Q9NY64 477 aa3.93□□□□□ -1.78
CKAP4-203ENST00000553039 ENPP5Q9UJA9 477 aa3.93□□□□□ -1.78
CKAP4-203ENST00000553039 ZNF580Q9UK33 172 aa3.93□□□□□ -1.78
CKAP4-203ENST00000553039 SIGLEC7Q9Y286 467 aa3.93□□□□□ -1.78
CKAP4-203ENST00000553039 SH3GLB1Q9Y371 365 aa3.93□□□□□ -1.78
CKAP4-203ENST00000553039 LINC00312Q9Y6C7 94 aa3.93□□□□□ -1.78
CKAP4-203ENST00000553039 V9GYQ6 96 aa3.93□□□□□ -1.78
CKAP4-203ENST00000553039 KIAA2026Q5HYC2 2103 aa3.92□□□□□ -1.78
CKAP4-203ENST00000553039 TRAV27A0A087WT01 109 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms