RNA–Protein interactions for RNA: ENST00000552085.1

SNRPF-204, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 3 BASIC

Gene SNRPF, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-204ENST00000552085 DUSP1P28562 367 aa9.42□□□□□ -0.9
SNRPF-204ENST00000552085 GLIPR1P48060 266 aa9.42□□□□□ -0.9
SNRPF-204ENST00000552085 TNFRSF9Q07011 255 aa9.42□□□□□ -0.9
SNRPF-204ENST00000552085 GINS1Q14691 196 aa9.42□□□□□ -0.9
SNRPF-204ENST00000552085 OR2T5Q6IEZ7 315 aa9.42□□□□□ -0.9
SNRPF-204ENST00000552085 LCN12Q6JVE5 192 aa9.42□□□□□ -0.9
SNRPF-204ENST00000552085 HDXQ7Z353 690 aa9.42□□□□□ -0.9
SNRPF-204ENST00000552085 IZUMO1Q8IYV9 350 aa9.42□□□□□ -0.9
SNRPF-204ENST00000552085 CCDC54Q8NEL0 328 aa9.42□□□□□ -0.9
SNRPF-204ENST00000552085 DNAAF1Q8NEP3 725 aa9.42□□□□□ -0.9
SNRPF-204ENST00000552085 BBS1Q8NFJ9 593 aa9.42□□□□□ -0.9
SNRPF-204ENST00000552085 OR10G2Q8NGC3 310 aa9.42□□□□□ -0.9
SNRPF-204ENST00000552085 OR2T10Q8NGZ9 312 aa9.42□□□□□ -0.9
SNRPF-204ENST00000552085 OR2T29Q8NH02 315 aa9.42□□□□□ -0.9
SNRPF-204ENST00000552085 CHST5Q9GZS9 411 aa9.42□□□□□ -0.9
SNRPF-204ENST00000552085 PLEKHA1Q9HB21 404 aa9.42□□□□□ -0.9
SNRPF-204ENST00000552085 KRT84Q9NSB2 600 aa9.42□□□□□ -0.9
SNRPF-204ENST00000552085 RBFOX1Q9NWB1 397 aaKnown RBP9.42□□□□□ -0.9
SNRPF-204ENST00000552085 MRM2Q9UI43 246 aaKnown RBP9.42□□□□□ -0.9
SNRPF-204ENST00000552085 IKZF2Q9UKS7 526 aa9.42□□□□□ -0.9
SNRPF-204ENST00000552085 IGHV3-72A0A0B4J1Y9 119 aa9.41□□□□□ -0.9
SNRPF-204ENST00000552085 KBTBD11-OT1A0A1B0GTJ5 212 aa9.41□□□□□ -0.9
SNRPF-204ENST00000552085 ARPC1BO15143 372 aaKnown RBP9.41□□□□□ -0.9
SNRPF-204ENST00000552085 INMTO95050 263 aa9.41□□□□□ -0.9
SNRPF-204ENST00000552085 NDUFB8O95169 186 aa9.41□□□□□ -0.9
SNRPF-204ENST00000552085 OR2H2O95918 312 aa9.41□□□□□ -0.9
SNRPF-204ENST00000552085 CYB5AP00167 134 aa9.41□□□□□ -0.9
SNRPF-204ENST00000552085 SERPINA3P01011 423 aa9.41□□□□□ -0.9
SNRPF-204ENST00000552085 TFAP2AP05549 437 aa9.41□□□□□ -0.9
SNRPF-204ENST00000552085 NPBWR2P48146 333 aa9.41□□□□□ -0.9
SNRPF-204ENST00000552085 RBP2P50120 134 aa9.41□□□□□ -0.9
SNRPF-204ENST00000552085 CD81P60033 236 aa9.41□□□□□ -0.9
SNRPF-204ENST00000552085 CDK5Q00535 292 aa9.41□□□□□ -0.9
SNRPF-204ENST00000552085 AESQ08117 197 aa9.41□□□□□ -0.9
SNRPF-204ENST00000552085 APOFQ13790 326 aa9.41□□□□□ -0.9
SNRPF-204ENST00000552085 GALEQ14376 348 aa9.41□□□□□ -0.9
SNRPF-204ENST00000552085 C17orf58Q2M2W7 97 aa9.41□□□□□ -0.9
SNRPF-204ENST00000552085 SLC16A12Q6ZSM3 486 aa9.41□□□□□ -0.9
SNRPF-204ENST00000552085 LYG2Q86SG7 212 aa9.41□□□□□ -0.9
SNRPF-204ENST00000552085 MOB3BQ86TA1 216 aa9.41□□□□□ -0.9
SNRPF-204ENST00000552085 DEFB125Q8N687 156 aa9.41□□□□□ -0.9
SNRPF-204ENST00000552085 HAVCR2Q8TDQ0 301 aa9.41□□□□□ -0.9
SNRPF-204ENST00000552085 UTP4Q969X6 686 aaKnown RBP9.41□□□□□ -0.9
SNRPF-204ENST00000552085 C10orf35Q96D05 121 aa9.41□□□□□ -0.9
SNRPF-204ENST00000552085 BORCS8Q96FH0 119 aa9.41□□□□□ -0.9
SNRPF-204ENST00000552085 KIRREL1Q96J84 757 aa9.41□□□□□ -0.9
SNRPF-204ENST00000552085 SRD5A3Q9H8P0 318 aa9.41□□□□□ -0.9
SNRPF-204ENST00000552085 LINC00574Q9H8X3 128 aa9.41□□□□□ -0.9
SNRPF-204ENST00000552085 HMG20AQ9NP66 347 aa9.41□□□□□ -0.9
SNRPF-204ENST00000552085 EXOSC4Q9NPD3 245 aaKnown RBP9.41□□□□□ -0.9
SNRPF-204ENST00000552085 OR6C3Q9NZP0 311 aa9.41□□□□□ -0.9
SNRPF-204ENST00000552085 GTF2A1LQ9UNN4 478 aa9.41□□□□□ -0.9
SNRPF-204ENST00000552085 COPS3Q9UNS2 423 aa9.41□□□□□ -0.9
SNRPF-204ENST00000552085 DMBT1Q9UGM3 2413 aaPredicted RBP9.4□□□□□ -0.9
SNRPF-204ENST00000552085 SIRPB1O00241 398 aa9.4□□□□□ -0.9
SNRPF-204ENST00000552085 CGB3P0DN86 165 aa9.4□□□□□ -0.9
SNRPF-204ENST00000552085 CGB7P0DN87 165 aa9.4□□□□□ -0.9
SNRPF-204ENST00000552085 PRKACAP17612 351 aa9.4□□□□□ -0.9
SNRPF-204ENST00000552085 ATF4P18848 351 aaPredicted RBP9.4□□□□□ -0.9
SNRPF-204ENST00000552085 BCL3P20749 454 aa9.4□□□□□ -0.9
SNRPF-204ENST00000552085 ATP1B3P54709 279 aa9.4□□□□□ -0.9
SNRPF-204ENST00000552085 ZNF322Q6U7Q0 402 aaPredicted RBP9.4□□□□□ -0.9
SNRPF-204ENST00000552085 Q8N402 240 aa9.4□□□□□ -0.9
SNRPF-204ENST00000552085 ZNF565Q8N9K5 539 aa9.4□□□□□ -0.9
SNRPF-204ENST00000552085 CHST4Q8NCG5 386 aa9.4□□□□□ -0.9
SNRPF-204ENST00000552085 GIPC3Q8TF64 312 aa9.4□□□□□ -0.9
SNRPF-204ENST00000552085 TSEN15Q8WW01 171 aaKnown RBP9.4□□□□□ -0.9
SNRPF-204ENST00000552085 NEURL2Q9BR09 285 aa9.4□□□□□ -0.9
SNRPF-204ENST00000552085 TEX12Q9BXU0 123 aa9.4□□□□□ -0.9
SNRPF-204ENST00000552085 COMMD4Q9H0A8 199 aa9.4□□□□□ -0.9
SNRPF-204ENST00000552085 NCOR1P1Q9H4R4 102 aa9.4□□□□□ -0.9
SNRPF-204ENST00000552085 RHOFQ9HBH0 211 aa9.4□□□□□ -0.9
SNRPF-204ENST00000552085 NDE1Q9NXR1 346 aa9.4□□□□□ -0.9
SNRPF-204ENST00000552085 ZNF107Q9UII5 783 aaPredicted RBP9.4□□□□□ -0.9
SNRPF-204ENST00000552085 IGHV1-3A0A0C4DH29 117 aa9.39□□□□□ -0.91
SNRPF-204ENST00000552085 IZUMO1RA6ND01 250 aa9.39□□□□□ -0.91
SNRPF-204ENST00000552085 XRCC3O43542 346 aa9.39□□□□□ -0.91
SNRPF-204ENST00000552085 SYT7O43581 403 aa9.39□□□□□ -0.91
SNRPF-204ENST00000552085 CDK2AP2O75956 126 aa9.39□□□□□ -0.91
SNRPF-204ENST00000552085 MRPL3P09001 348 aaKnown RBP9.39□□□□□ -0.91
SNRPF-204ENST00000552085 OSMP13725 252 aa9.39□□□□□ -0.91
SNRPF-204ENST00000552085 ZNF816Q0VGE8 651 aaPredicted RBP9.39□□□□□ -0.91
SNRPF-204ENST00000552085 RAB40BQ12829 278 aa9.39□□□□□ -0.91
SNRPF-204ENST00000552085 KRBOX4Q5JUW0 171 aa9.39□□□□□ -0.91
SNRPF-204ENST00000552085 Q8N1X5 172 aa9.39□□□□□ -0.91
SNRPF-204ENST00000552085 OR8H1Q8NGG4 311 aa9.39□□□□□ -0.91
SNRPF-204ENST00000552085 PP6455Q8WZ26 134 aa9.39□□□□□ -0.91
SNRPF-204ENST00000552085 LEAP2Q969E1 77 aa9.39□□□□□ -0.91
SNRPF-204ENST00000552085 RNF183Q96D59 192 aa9.39□□□□□ -0.91
SNRPF-204ENST00000552085 COQ2Q96H96 371 aa9.39□□□□□ -0.91
SNRPF-204ENST00000552085 CNN2Q99439 309 aaKnown RBP9.39□□□□□ -0.91
SNRPF-204ENST00000552085 APOL4Q9BPW4 351 aa9.39□□□□□ -0.91
SNRPF-204ENST00000552085 ETAA1Q9NY74 926 aa9.39□□□□□ -0.91
SNRPF-204ENST00000552085 PSG11Q9UQ72 335 aa9.39□□□□□ -0.91
SNRPF-204ENST00000552085 FBXO7Q9Y3I1 522 aa9.39□□□□□ -0.91
SNRPF-204ENST00000552085 PKD1P98161 4303 aa9.39□□□□□ -0.91
SNRPF-204ENST00000552085 DNAH17Q9UFH2 4485 aa9.39□□□□□ -0.91
SNRPF-204ENST00000552085 TRAV41A0A0B4J266 112 aa9.38□□□□□ -0.91
SNRPF-204ENST00000552085 TCRBV5S2A0A599 114 aa9.38□□□□□ -0.91
SNRPF-204ENST00000552085 CCDC182A6NF36 153 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms