RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 P2RX4Q99571 388 aa17.13■□□□□ 0.33
SMARCC2-210ENST00000550519 ALG8Q9BVK2 526 aa17.13■□□□□ 0.33
SMARCC2-210ENST00000550519 ISG20L2Q9H9L3 353 aaKnown RBP17.13■□□□□ 0.33
SMARCC2-210ENST00000550519 TMEM212A6NML5 194 aa17.12■□□□□ 0.33
SMARCC2-210ENST00000550519 SNTNA6NMZ2 147 aa17.12■□□□□ 0.33
SMARCC2-210ENST00000550519 SERPINE3A8MV23 424 aa17.12■□□□□ 0.33
SMARCC2-210ENST00000550519 KCNJ3P48549 501 aa17.12■□□□□ 0.33
SMARCC2-210ENST00000550519 HNF4GQ14541 408 aa17.12■□□□□ 0.33
SMARCC2-210ENST00000550519 ZSCAN26Q16670 478 aa17.12■□□□□ 0.33
SMARCC2-210ENST00000550519 ZNF529Q6P280 563 aa17.12■□□□□ 0.33
SMARCC2-210ENST00000550519 COMMD1Q8N668 190 aa17.12■□□□□ 0.33
SMARCC2-210ENST00000550519 RFESDQ8TAC1 157 aa17.12■□□□□ 0.33
SMARCC2-210ENST00000550519 MRGPRDQ8TDS7 321 aa17.12■□□□□ 0.33
SMARCC2-210ENST00000550519 MYCBPQ99417 103 aaPredicted RBP17.12■□□□□ 0.33
SMARCC2-210ENST00000550519 AASSQ9UDR5 926 aa17.12■□□□□ 0.33
SMARCC2-210ENST00000550519 LINC00527Q9UJ94 153 aa17.12■□□□□ 0.33
SMARCC2-210ENST00000550519 E9PI62 339 aa17.11■□□□□ 0.33
SMARCC2-210ENST00000550519 IGKV1D-33P01593 117 aa17.11■□□□□ 0.33
SMARCC2-210ENST00000550519 IGKV1-33P01594 117 aa17.11■□□□□ 0.33
SMARCC2-210ENST00000550519 GABRB1P18505 474 aa17.11■□□□□ 0.33
SMARCC2-210ENST00000550519 GNG10P50151 68 aa17.11■□□□□ 0.33
SMARCC2-210ENST00000550519 EBI3Q14213 229 aa17.11■□□□□ 0.33
SMARCC2-210ENST00000550519 LTC4SQ16873 150 aa17.11■□□□□ 0.33
SMARCC2-210ENST00000550519 LPCAT4Q643R3 524 aa17.11■□□□□ 0.33
SMARCC2-210ENST00000550519 SLC35E3Q7Z769 313 aa17.11■□□□□ 0.33
SMARCC2-210ENST00000550519 OR5AK2Q8NH90 309 aa17.11■□□□□ 0.33
SMARCC2-210ENST00000550519 CPNE2Q96FN4 548 aaPredicted RBP17.11■□□□□ 0.33
SMARCC2-210ENST00000550519 PDCD1LG2Q9BQ51 273 aa17.11■□□□□ 0.33
SMARCC2-210ENST00000550519 DHDHQ9UQ10 334 aa17.11■□□□□ 0.33
SMARCC2-210ENST00000550519 ORC6Q9Y5N6 252 aa17.11■□□□□ 0.33
SMARCC2-210ENST00000550519 NUDT19A8MXV4 375 aa17.1■□□□□ 0.33
SMARCC2-210ENST00000550519 GABRPO00591 440 aa17.1■□□□□ 0.33
SMARCC2-210ENST00000550519 EI24O14681 340 aa17.1■□□□□ 0.33
SMARCC2-210ENST00000550519 ATP5HO75947 161 aa17.1■□□□□ 0.33
SMARCC2-210ENST00000550519 CCDC159P0C7I6 412 aa17.1■□□□□ 0.33
SMARCC2-210ENST00000550519 SSTR5P35346 364 aa17.1■□□□□ 0.33
SMARCC2-210ENST00000550519 SLC35B1P78383 322 aa17.1■□□□□ 0.33
SMARCC2-210ENST00000550519 MRPL28Q13084 256 aaKnown RBP17.1■□□□□ 0.33
SMARCC2-210ENST00000550519 PIGYQ3MUY2 71 aa17.1■□□□□ 0.33
SMARCC2-210ENST00000550519 ZIK1Q3SY52 487 aaPredicted RBP17.1■□□□□ 0.33
SMARCC2-210ENST00000550519 ASCL4Q6XD76 172 aa17.1■□□□□ 0.33
SMARCC2-210ENST00000550519 STPG2Q8N412 459 aa17.1■□□□□ 0.33
SMARCC2-210ENST00000550519 KLHL30-AS1Q8NEE0 82 aa17.1■□□□□ 0.33
SMARCC2-210ENST00000550519 OR51A2Q8NGJ7 313 aa17.1■□□□□ 0.33
SMARCC2-210ENST00000550519 OR10K1Q8NGX5 313 aa17.1■□□□□ 0.33
SMARCC2-210ENST00000550519 TNFAIP8L1Q8WVP5 186 aa17.1■□□□□ 0.33
SMARCC2-210ENST00000550519 WWC2-AS2Q96NR7 200 aa17.1■□□□□ 0.33
SMARCC2-210ENST00000550519 FAM53CQ9NYF3 392 aa17.1■□□□□ 0.33
SMARCC2-210ENST00000550519 H0YHG0 523 aa17.09■□□□□ 0.33
SMARCC2-210ENST00000550519 RAB3AP20336 220 aa17.09■□□□□ 0.33
SMARCC2-210ENST00000550519 ALDH3A2P51648 485 aa17.09■□□□□ 0.33
SMARCC2-210ENST00000550519 ZNF816Q0VGE8 651 aaPredicted RBP17.09■□□□□ 0.33
SMARCC2-210ENST00000550519 ZNF695Q8IW36 515 aa17.09■□□□□ 0.33
SMARCC2-210ENST00000550519 FOXRED2Q8IWF2 684 aa17.09■□□□□ 0.33
SMARCC2-210ENST00000550519 OR10X1Q8NGY0 326 aa17.09■□□□□ 0.33
SMARCC2-210ENST00000550519 TSEN15Q8WW01 171 aaKnown RBP17.09■□□□□ 0.33
SMARCC2-210ENST00000550519 PYDC1Q8WXC3 89 aa17.09■□□□□ 0.33
SMARCC2-210ENST00000550519 ERVK13-1Q9NX77 482 aa17.09■□□□□ 0.33
SMARCC2-210ENST00000550519 TRAV39A0A0B4J263 110 aa17.08■□□□□ 0.32
SMARCC2-210ENST00000550519 A0A1W2PPE3 182 aa17.08■□□□□ 0.32
SMARCC2-210ENST00000550519 LINC01548A6NM66 108 aa17.08■□□□□ 0.32
SMARCC2-210ENST00000550519 HSD17B6O14756 317 aa17.08■□□□□ 0.32
SMARCC2-210ENST00000550519 MAGEB3O15480 346 aa17.08■□□□□ 0.32
SMARCC2-210ENST00000550519 FADS2O95864 444 aaKnown RBP17.08■□□□□ 0.32
SMARCC2-210ENST00000550519 VSIG8P0DPA2 414 aa17.08■□□□□ 0.32
SMARCC2-210ENST00000550519 DCTN2Q13561 401 aaKnown RBP17.08■□□□□ 0.32
SMARCC2-210ENST00000550519 UNQ9370/PRO34162Q6UXP9 181 aa17.08■□□□□ 0.32
SMARCC2-210ENST00000550519 SATL1Q86VE3 508 aa17.08■□□□□ 0.32
SMARCC2-210ENST00000550519 GPER1Q99527 375 aa17.08■□□□□ 0.32
SMARCC2-210ENST00000550519 DPCDQ9BVM2 203 aaPredicted RBP17.08■□□□□ 0.32
SMARCC2-210ENST00000550519 IFT22Q9H7X7 185 aa17.08■□□□□ 0.32
SMARCC2-210ENST00000550519 ZNF581Q9P0T4 197 aa17.08■□□□□ 0.32
SMARCC2-210ENST00000550519 ZMAT5Q9UDW3 170 aaKnown RBP17.08■□□□□ 0.32
SMARCC2-210ENST00000550519 IGHV1-3A0A0C4DH29 117 aa17.07■□□□□ 0.32
SMARCC2-210ENST00000550519 CIB2O75838 187 aa17.07■□□□□ 0.32
SMARCC2-210ENST00000550519 GAPDHP04406 335 aaKnown RBP17.07■□□□□ 0.32
SMARCC2-210ENST00000550519 GZMHP20718 246 aa17.07■□□□□ 0.32
SMARCC2-210ENST00000550519 RSU1Q15404 277 aa17.07■□□□□ 0.32
SMARCC2-210ENST00000550519 TGIF2LXQ8IUE1 241 aa17.07■□□□□ 0.32
SMARCC2-210ENST00000550519 Q8N6K4 173 aa17.07■□□□□ 0.32
SMARCC2-210ENST00000550519 SUMF2Q8NBJ7 301 aa17.07■□□□□ 0.32
SMARCC2-210ENST00000550519 EAF1Q96JC9 268 aaPredicted RBP17.07■□□□□ 0.32
SMARCC2-210ENST00000550519 AMBNQ9NP70 447 aa17.07■□□□□ 0.32
SMARCC2-210ENST00000550519 RYR3Q15413 4870 aa17.07■□□□□ 0.32
SMARCC2-210ENST00000550519 AP4M1O00189 453 aa17.06■□□□□ 0.32
SMARCC2-210ENST00000550519 CCRL2O00421 344 aa17.06■□□□□ 0.32
SMARCC2-210ENST00000550519 HTR3BO95264 441 aa17.06■□□□□ 0.32
SMARCC2-210ENST00000550519 GBX2P52951 348 aaPredicted RBP17.06■□□□□ 0.32
SMARCC2-210ENST00000550519 DGCR2P98153 550 aa17.06■□□□□ 0.32
SMARCC2-210ENST00000550519 NHLRC3Q5JS37 347 aa17.06■□□□□ 0.32
SMARCC2-210ENST00000550519 TEX38Q6PEX7 206 aa17.06■□□□□ 0.32
SMARCC2-210ENST00000550519 MOB3BQ86TA1 216 aa17.06■□□□□ 0.32
SMARCC2-210ENST00000550519 IZUMO1Q8IYV9 350 aa17.06■□□□□ 0.32
SMARCC2-210ENST00000550519 OR52M1Q8NGK5 317 aa17.06■□□□□ 0.32
SMARCC2-210ENST00000550519 RHOXF1Q8NHV9 184 aa17.06■□□□□ 0.32
SMARCC2-210ENST00000550519 RGP1Q92546 391 aaPredicted RBP17.06■□□□□ 0.32
SMARCC2-210ENST00000550519 RAX2Q96IS3 184 aa17.06■□□□□ 0.32
SMARCC2-210ENST00000550519 DUX3Q96PT4 197 aa17.06■□□□□ 0.32
SMARCC2-210ENST00000550519 JAM3Q9BX67 310 aa17.06■□□□□ 0.32
SMARCC2-210ENST00000550519 FAM192AQ9GZU8 254 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms