RNA–Protein interactions for RNA: ENST00000549490.1

UBE2N-203, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 2

Gene UBE2N, Length 676 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-203ENST00000549490 ELOVL1Q9BW60 279 aa6.81□□□□□ -1.32
UBE2N-203ENST00000549490 CHST5Q9GZS9 411 aa6.81□□□□□ -1.32
UBE2N-203ENST00000549490 PLEKHA1Q9HB21 404 aa6.81□□□□□ -1.32
UBE2N-203ENST00000549490 KRT84Q9NSB2 600 aa6.81□□□□□ -1.32
UBE2N-203ENST00000549490 KIF25Q9UIL4 384 aa6.81□□□□□ -1.32
UBE2N-203ENST00000549490 MRPS28Q9Y2Q9 187 aaKnown RBP6.81□□□□□ -1.32
UBE2N-203ENST00000549490 CEPT1Q9Y6K0 416 aa6.81□□□□□ -1.32
UBE2N-203ENST00000549490 MEIKINA0A087WXM9 373 aa6.8□□□□□ -1.32
UBE2N-203ENST00000549490 TRAV41A0A0B4J266 112 aa6.8□□□□□ -1.32
UBE2N-203ENST00000549490 H3BN98 237 aa6.8□□□□□ -1.32
UBE2N-203ENST00000549490 ATP6V0E1O15342 81 aa6.8□□□□□ -1.32
UBE2N-203ENST00000549490 HSPB1P04792 205 aaKnown RBP6.8□□□□□ -1.32
UBE2N-203ENST00000549490 SLC2A2P11168 524 aaPredicted RBP6.8□□□□□ -1.32
UBE2N-203ENST00000549490 SNRPBP14678 240 aaKnown RBP6.8□□□□□ -1.32
UBE2N-203ENST00000549490 C21orf33P30042 268 aaPredicted RBP6.8□□□□□ -1.32
UBE2N-203ENST00000549490 ATP1B3P54709 279 aa6.8□□□□□ -1.32
UBE2N-203ENST00000549490 MTCP1P56278 107 aa6.8□□□□□ -1.32
UBE2N-203ENST00000549490 PDZK1IP1Q13113 114 aa6.8□□□□□ -1.32
UBE2N-203ENST00000549490 APOFQ13790 326 aa6.8□□□□□ -1.32
UBE2N-203ENST00000549490 GINS1Q14691 196 aa6.8□□□□□ -1.32
UBE2N-203ENST00000549490 MICAQ29983 383 aa6.8□□□□□ -1.32
UBE2N-203ENST00000549490 ODF4Q2M2E3 257 aa6.8□□□□□ -1.32
UBE2N-203ENST00000549490 MINDY2Q8NBR6 621 aa6.8□□□□□ -1.32
UBE2N-203ENST00000549490 CHST4Q8NCG5 386 aa6.8□□□□□ -1.32
UBE2N-203ENST00000549490 DNAAF1Q8NEP3 725 aa6.8□□□□□ -1.32
UBE2N-203ENST00000549490 OR51T1Q8NGJ9 327 aa6.8□□□□□ -1.32
UBE2N-203ENST00000549490 CASTOR1Q8WTX7 329 aa6.8□□□□□ -1.32
UBE2N-203ENST00000549490 RTN4IP1Q8WWV3 396 aaPredicted RBP6.8□□□□□ -1.32
UBE2N-203ENST00000549490 NSMCE2Q96MF7 247 aa6.8□□□□□ -1.32
UBE2N-203ENST00000549490 ZCCHC4Q9H5U6 513 aa6.8□□□□□ -1.32
UBE2N-203ENST00000549490 SPAG4Q9NPE6 437 aa6.8□□□□□ -1.32
UBE2N-203ENST00000549490 PARP11Q9NR21 331 aa6.8□□□□□ -1.32
UBE2N-203ENST00000549490 MAGEL2Q9UJ55 1249 aa6.8□□□□□ -1.32
UBE2N-203ENST00000549490 SNX5Q9Y5X3 404 aa6.8□□□□□ -1.32
UBE2N-203ENST00000549490 TMEM14AQ9Y6G1 99 aa6.8□□□□□ -1.32
UBE2N-203ENST00000549490 VPS13DQ5THJ4 4388 aa6.8□□□□□ -1.32
UBE2N-203ENST00000549490 IGKV1-9A0A0C4DH69 117 aa6.79□□□□□ -1.32
UBE2N-203ENST00000549490 CXorf65A6NEN9 183 aa6.79□□□□□ -1.32
UBE2N-203ENST00000549490 CCDC182A6NF36 153 aa6.79□□□□□ -1.32
UBE2N-203ENST00000549490 H0Y980 276 aa6.79□□□□□ -1.32
UBE2N-203ENST00000549490 DEGS1O15121 323 aa6.79□□□□□ -1.32
UBE2N-203ENST00000549490 ARPC2O15144 300 aa6.79□□□□□ -1.32
UBE2N-203ENST00000549490 SYT7O43581 403 aa6.79□□□□□ -1.32
UBE2N-203ENST00000549490 SOX15O60248 233 aa6.79□□□□□ -1.32
UBE2N-203ENST00000549490 RGS11O94810 467 aa6.79□□□□□ -1.32
UBE2N-203ENST00000549490 SERPINA3P01011 423 aa6.79□□□□□ -1.32
UBE2N-203ENST00000549490 SSTR5P35346 364 aa6.79□□□□□ -1.32
UBE2N-203ENST00000549490 PMS2P11Q13670 270 aa6.79□□□□□ -1.32
UBE2N-203ENST00000549490 CDK5R1Q15078 307 aa6.79□□□□□ -1.32
UBE2N-203ENST00000549490 ZNF322Q6U7Q0 402 aaPredicted RBP6.79□□□□□ -1.32
UBE2N-203ENST00000549490 GTSCR1Q86UQ5 136 aa6.79□□□□□ -1.32
UBE2N-203ENST00000549490 YIPF7Q8N8F6 280 aa6.79□□□□□ -1.32
UBE2N-203ENST00000549490 OR10A7Q8NGE5 316 aa6.79□□□□□ -1.32
UBE2N-203ENST00000549490 MRGPRDQ8TDS7 321 aa6.79□□□□□ -1.32
UBE2N-203ENST00000549490 FLYWCH2Q96CP2 140 aaKnown RBP6.79□□□□□ -1.32
UBE2N-203ENST00000549490 MBOAT4Q96T53 435 aa6.79□□□□□ -1.32
UBE2N-203ENST00000549490 NCOR1P1Q9H4R4 102 aa6.79□□□□□ -1.32
UBE2N-203ENST00000549490 FAM53CQ9NYF3 392 aa6.79□□□□□ -1.32
UBE2N-203ENST00000549490 MRM2Q9UI43 246 aaKnown RBP6.79□□□□□ -1.32
UBE2N-203ENST00000549490 PKHD1P08F94 4074 aa6.78□□□□□ -1.32
UBE2N-203ENST00000549490 IGHV7-81A0A0B4J1V7 117 aa6.78□□□□□ -1.32
UBE2N-203ENST00000549490 TRAV39A0A0B4J263 110 aa6.78□□□□□ -1.32
UBE2N-203ENST00000549490 HSPB6O14558 160 aa6.78□□□□□ -1.32
UBE2N-203ENST00000549490 KDM4BO94953 1096 aa6.78□□□□□ -1.32
UBE2N-203ENST00000549490 IGHV3-11P01762 117 aa6.78□□□□□ -1.32
UBE2N-203ENST00000549490 HMGN1P05114 100 aa6.78□□□□□ -1.32
UBE2N-203ENST00000549490 BLVRBP30043 206 aaPredicted RBP6.78□□□□□ -1.32
UBE2N-203ENST00000549490 VHLP40337 213 aa6.78□□□□□ -1.32
UBE2N-203ENST00000549490 MAGEA2P43356 314 aa6.78□□□□□ -1.32
UBE2N-203ENST00000549490 RAB40BQ12829 278 aa6.78□□□□□ -1.32
UBE2N-203ENST00000549490 C19orf54Q5BKX5 351 aa6.78□□□□□ -1.32
UBE2N-203ENST00000549490 IL34Q6ZMJ4 242 aa6.78□□□□□ -1.32
UBE2N-203ENST00000549490 LINC00311Q8N616 119 aa6.78□□□□□ -1.32
UBE2N-203ENST00000549490 RFT1Q96AA3 541 aa6.78□□□□□ -1.32
UBE2N-203ENST00000549490 LRGUKQ96M69 825 aa6.78□□□□□ -1.32
UBE2N-203ENST00000549490 SPACA5Q96QH8 159 aa6.78□□□□□ -1.32
UBE2N-203ENST00000549490 FEVQ99581 238 aa6.78□□□□□ -1.32
UBE2N-203ENST00000549490 FGFR1OP2Q9NVK5 253 aa6.78□□□□□ -1.32
UBE2N-203ENST00000549490 SAMHD1Q9Y3Z3 626 aaKnown RBP6.78□□□□□ -1.32
UBE2N-203ENST00000549490 TRAV24A0A0B4J272 114 aa6.77□□□□□ -1.33
UBE2N-203ENST00000549490 SHISA3A0PJX4 238 aa6.77□□□□□ -1.33
UBE2N-203ENST00000549490 IZUMO1RA6ND01 250 aa6.77□□□□□ -1.33
UBE2N-203ENST00000549490 NUPR2A6NF83 97 aa6.77□□□□□ -1.33
UBE2N-203ENST00000549490 ARPC1BO15143 372 aaKnown RBP6.77□□□□□ -1.33
UBE2N-203ENST00000549490 RPP14O95059 124 aaKnown RBP6.77□□□□□ -1.33
UBE2N-203ENST00000549490 HLA-DRB1P01911 266 aa6.77□□□□□ -1.33
UBE2N-203ENST00000549490 HSD17B1P14061 328 aa6.77□□□□□ -1.33
UBE2N-203ENST00000549490 ATF1P18846 271 aa6.77□□□□□ -1.33
UBE2N-203ENST00000549490 PRKACBP22694 351 aa6.77□□□□□ -1.33
UBE2N-203ENST00000549490 CXCR4P61073 352 aa6.77□□□□□ -1.33
UBE2N-203ENST00000549490 ACTR3P61158 418 aa6.77□□□□□ -1.33
UBE2N-203ENST00000549490 CDK5Q00535 292 aa6.77□□□□□ -1.33
UBE2N-203ENST00000549490 MMDQ15546 238 aa6.77□□□□□ -1.33
UBE2N-203ENST00000549490 PAN3Q58A45 887 aaKnown RBP6.77□□□□□ -1.33
UBE2N-203ENST00000549490 RSBN1Q5VWQ0 802 aaPredicted RBP6.77□□□□□ -1.33
UBE2N-203ENST00000549490 CEMP1Q6PRD7 247 aaPredicted RBP6.77□□□□□ -1.33
UBE2N-203ENST00000549490 C8orf31Q8N9H6 132 aa6.77□□□□□ -1.33
UBE2N-203ENST00000549490 OR10G2Q8NGC3 310 aa6.77□□□□□ -1.33
UBE2N-203ENST00000549490 PLPPR1Q8TBJ4 325 aa6.77□□□□□ -1.33
UBE2N-203ENST00000549490 PP6455Q8WZ26 134 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms