RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 OR10C1Q96KK4 312 aa2.99□□□□□ -1.93
SCAF11-210ENST00000547654 KCTD7Q96MP8 289 aa2.99□□□□□ -1.93
SCAF11-210ENST00000547654 SLC25A39Q9BZJ4 359 aaPredicted RBP2.99□□□□□ -1.93
SCAF11-210ENST00000547654 ARL6Q9H0F7 186 aa2.99□□□□□ -1.93
SCAF11-210ENST00000547654 METTL9Q9H1A3 318 aa2.99□□□□□ -1.93
SCAF11-210ENST00000547654 OR51V1Q9H2C8 321 aa2.99□□□□□ -1.93
SCAF11-210ENST00000547654 FAM206AQ9NX38 181 aa2.99□□□□□ -1.93
SCAF11-210ENST00000547654 BABAM2Q9NXR7 383 aa2.99□□□□□ -1.93
SCAF11-210ENST00000547654 PRO0628Q9UI54 55 aa2.99□□□□□ -1.93
SCAF11-210ENST00000547654 CHD7Q9P2D1 2997 aa2.99□□□□□ -1.93
SCAF11-210ENST00000547654 PLXNA3P51805 1871 aa2.99□□□□□ -1.93
SCAF11-210ENST00000547654 CHD9Q3L8U1 2897 aa2.98□□□□□ -1.93
SCAF11-210ENST00000547654 IGHV3-66A0A0C4DH42 116 aa2.98□□□□□ -1.93
SCAF11-210ENST00000547654 CEACAM18A8MTB9 384 aa2.98□□□□□ -1.93
SCAF11-210ENST00000547654 F5H768 121 aa2.98□□□□□ -1.93
SCAF11-210ENST00000547654 LAD1O00515 517 aa2.98□□□□□ -1.93
SCAF11-210ENST00000547654 HDAC3O15379 428 aa2.98□□□□□ -1.93
SCAF11-210ENST00000547654 SULT1B1O43704 296 aa2.98□□□□□ -1.93
SCAF11-210ENST00000547654 REM1O75628 298 aa2.98□□□□□ -1.93
SCAF11-210ENST00000547654 DHRS3O75911 302 aa2.98□□□□□ -1.93
SCAF11-210ENST00000547654 RPP14O95059 124 aaKnown RBP2.98□□□□□ -1.93
SCAF11-210ENST00000547654 SOX14O95416 240 aa2.98□□□□□ -1.93
SCAF11-210ENST00000547654 IFNA5P01569 189 aa2.98□□□□□ -1.93
SCAF11-210ENST00000547654 IGKV1D-16P01601 117 aa2.98□□□□□ -1.93
SCAF11-210ENST00000547654 IGLV2-23P01705 113 aa2.98□□□□□ -1.93
SCAF11-210ENST00000547654 ZNF7P17097 686 aaPredicted RBP2.98□□□□□ -1.93
SCAF11-210ENST00000547654 AKR1C4P17516 323 aa2.98□□□□□ -1.93
SCAF11-210ENST00000547654 TSPOP30536 169 aa2.98□□□□□ -1.93
SCAF11-210ENST00000547654 CLDN12P56749 244 aa2.98□□□□□ -1.93
SCAF11-210ENST00000547654 RPL10AP62906 217 aaKnown RBP2.98□□□□□ -1.93
SCAF11-210ENST00000547654 CDK5Q00535 292 aa2.98□□□□□ -1.93
SCAF11-210ENST00000547654 MLLT11Q13015 90 aaPredicted RBP2.98□□□□□ -1.93
SCAF11-210ENST00000547654 PNOCQ13519 176 aa2.98□□□□□ -1.93
SCAF11-210ENST00000547654 IMPG1Q17R60 797 aa2.98□□□□□ -1.93
SCAF11-210ENST00000547654 RSPO1Q2MKA7 263 aaPredicted RBP2.98□□□□□ -1.93
SCAF11-210ENST00000547654 ATP6AP1LQ52LC2 224 aa2.98□□□□□ -1.93
SCAF11-210ENST00000547654 TMEM31Q5JXX7 168 aa2.98□□□□□ -1.93
SCAF11-210ENST00000547654 C9orf129Q5T035 196 aaKnown RBP2.98□□□□□ -1.93
SCAF11-210ENST00000547654 KDM4DQ6B0I6 523 aa2.98□□□□□ -1.93
SCAF11-210ENST00000547654 LAMTOR1Q6IAA8 161 aa2.98□□□□□ -1.93
SCAF11-210ENST00000547654 DNM1P34Q6PK57 102 aa2.98□□□□□ -1.93
SCAF11-210ENST00000547654 CEMP1Q6PRD7 247 aaPredicted RBP2.98□□□□□ -1.93
SCAF11-210ENST00000547654 ENTHD1Q8IYW4 607 aa2.98□□□□□ -1.93
SCAF11-210ENST00000547654 STOML3Q8TAV4 291 aa2.98□□□□□ -1.93
SCAF11-210ENST00000547654 PIGXQ8TBF5 258 aa2.98□□□□□ -1.93
SCAF11-210ENST00000547654 SMIM19Q96E16 107 aa2.98□□□□□ -1.93
SCAF11-210ENST00000547654 MRPL48Q96GC5 212 aaKnown RBP2.98□□□□□ -1.93
SCAF11-210ENST00000547654 SMIM8Q96KF7 97 aa2.98□□□□□ -1.93
SCAF11-210ENST00000547654 BMFQ96LC9 184 aa2.98□□□□□ -1.93
SCAF11-210ENST00000547654 MRPL20Q9BYC9 149 aaKnown RBP2.98□□□□□ -1.93
SCAF11-210ENST00000547654 DERL2Q9GZP9 239 aa2.98□□□□□ -1.93
SCAF11-210ENST00000547654 TPK1Q9H3S4 243 aa2.98□□□□□ -1.93
SCAF11-210ENST00000547654 NANOGQ9H9S0 305 aa2.98□□□□□ -1.93
SCAF11-210ENST00000547654 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.98□□□□□ -1.93
SCAF11-210ENST00000547654 SNX10Q9Y5X0 201 aa2.98□□□□□ -1.93
SCAF11-210ENST00000547654 ZFYVE26Q68DK2 2539 aa2.98□□□□□ -1.93
SCAF11-210ENST00000547654 LRRC37A2A6NM11 1700 aa2.98□□□□□ -1.93
SCAF11-210ENST00000547654 CARMIL3Q8ND23 1372 aa2.98□□□□□ -1.93
SCAF11-210ENST00000547654 LTBP2Q14767 1821 aa2.98□□□□□ -1.93
SCAF11-210ENST00000547654 ZFHX2Q9C0A1 2572 aaPredicted RBP2.98□□□□□ -1.93
SCAF11-210ENST00000547654 USP9XQ93008 2570 aaPredicted RBP2.97□□□□□ -1.93
SCAF11-210ENST00000547654 IGLV11-55A0A075B6I3 123 aa2.97□□□□□ -1.93
SCAF11-210ENST00000547654 TRAV8-2A0A0B4J237 113 aa2.97□□□□□ -1.93
SCAF11-210ENST00000547654 CENPBD1B2RD01 187 aa2.97□□□□□ -1.93
SCAF11-210ENST00000547654 F5H5T6 163 aa2.97□□□□□ -1.93
SCAF11-210ENST00000547654 M0R1X1 148 aa2.97□□□□□ -1.93
SCAF11-210ENST00000547654 BIRC5O15392 142 aa2.97□□□□□ -1.93
SCAF11-210ENST00000547654 ZZEF1O43149 2961 aa2.97□□□□□ -1.93
SCAF11-210ENST00000547654 BCL2L11O43521 198 aa2.97□□□□□ -1.93
SCAF11-210ENST00000547654 STX10O60499 249 aa2.97□□□□□ -1.93
SCAF11-210ENST00000547654 SERPINB7O75635 380 aa2.97□□□□□ -1.93
SCAF11-210ENST00000547654 TAC1P20366 129 aa2.97□□□□□ -1.93
SCAF11-210ENST00000547654 RCVRNP35243 200 aa2.97□□□□□ -1.93
SCAF11-210ENST00000547654 CTRLP40313 264 aa2.97□□□□□ -1.93
SCAF11-210ENST00000547654 RAP1GDS1P52306 607 aa2.97□□□□□ -1.93
SCAF11-210ENST00000547654 NKX2-5P52952 324 aaPredicted RBP2.97□□□□□ -1.93
SCAF11-210ENST00000547654 AP3S2P59780 193 aa2.97□□□□□ -1.93
SCAF11-210ENST00000547654 RAP1AP62834 184 aa2.97□□□□□ -1.93
SCAF11-210ENST00000547654 REEP5Q00765 189 aa2.97□□□□□ -1.93
SCAF11-210ENST00000547654 C16orf72Q14CZ0 275 aa2.97□□□□□ -1.93
SCAF11-210ENST00000547654 TMEM255AQ5JRV8 349 aa2.97□□□□□ -1.93
SCAF11-210ENST00000547654 CLEC12AQ5QGZ9 265 aa2.97□□□□□ -1.93
SCAF11-210ENST00000547654 ZNF544Q6NX49 715 aa2.97□□□□□ -1.93
SCAF11-210ENST00000547654 CASP12Q6UXS9 341 aa2.97□□□□□ -1.93
SCAF11-210ENST00000547654 IL34Q6ZMJ4 242 aa2.97□□□□□ -1.93
SCAF11-210ENST00000547654 DGAT2L6Q6ZPD8 337 aa2.97□□□□□ -1.93
SCAF11-210ENST00000547654 FAM183BPQ6ZVS7 135 aa2.97□□□□□ -1.93
SCAF11-210ENST00000547654 CALHM1Q8IU99 346 aa2.97□□□□□ -1.93
SCAF11-210ENST00000547654 ZCCHC24Q8N2G6 241 aaKnown RBP2.97□□□□□ -1.93
SCAF11-210ENST00000547654 ZNF786Q8N393 782 aa2.97□□□□□ -1.93
SCAF11-210ENST00000547654 OR8K1Q8NGG5 319 aa2.97□□□□□ -1.93
SCAF11-210ENST00000547654 GHSRQ92847 366 aa2.97□□□□□ -1.93
SCAF11-210ENST00000547654 HGDQ93099 445 aa2.97□□□□□ -1.93
SCAF11-210ENST00000547654 PTH2Q96A98 100 aa2.97□□□□□ -1.93
SCAF11-210ENST00000547654 EXOSC8Q96B26 276 aaKnown RBP2.97□□□□□ -1.93
SCAF11-210ENST00000547654 SUCNR1Q9BXA5 334 aa2.97□□□□□ -1.93
SCAF11-210ENST00000547654 UGT2B28Q9BY64 529 aa2.97□□□□□ -1.93
SCAF11-210ENST00000547654 TRIM45Q9H8W5 580 aaPredicted RBP2.97□□□□□ -1.93
SCAF11-210ENST00000547654 HRASLSQ9HDD0 168 aa2.97□□□□□ -1.93
SCAF11-210ENST00000547654 OR12D3Q9UGF7 316 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms