RNA–Protein interactions for RNA: ENST00000546211.5

SKP2-208, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5 BASIC

Gene SKP2, Length 1,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-208ENST00000546211 DEFB108BQ8NET1 73 aa16.27■□□□□ 0.2
SKP2-208ENST00000546211 OR4A4PQ8NGN8 299 aa16.27■□□□□ 0.2
SKP2-208ENST00000546211 SEC22CQ9BRL7 303 aa16.27■□□□□ 0.2
SKP2-208ENST00000546211 SHARPINQ9H0F6 387 aa16.27■□□□□ 0.2
SKP2-208ENST00000546211 MED28Q9H204 178 aa16.27■□□□□ 0.2
SKP2-208ENST00000546211 MYOZ1Q9NP98 299 aaPredicted RBP16.27■□□□□ 0.2
SKP2-208ENST00000546211 DCAF16Q9NXF7 216 aa16.27■□□□□ 0.2
SKP2-208ENST00000546211 KLF2Q9Y5W3 355 aaPredicted RBP16.27■□□□□ 0.2
SKP2-208ENST00000546211 TRAV38-1A0A0B4J264 116 aa16.26■□□□□ 0.19
SKP2-208ENST00000546211 OR5H14A6NHG9 310 aa16.26■□□□□ 0.19
SKP2-208ENST00000546211 A6NNC1 897 aa16.26■□□□□ 0.19
SKP2-208ENST00000546211 LGALS8O00214 317 aa16.26■□□□□ 0.19
SKP2-208ENST00000546211 CREBL2O60519 120 aaPredicted RBP16.26■□□□□ 0.19
SKP2-208ENST00000546211 GOSR1O95249 250 aa16.26■□□□□ 0.19
SKP2-208ENST00000546211 HPXP02790 462 aa16.26■□□□□ 0.19
SKP2-208ENST00000546211 VSIG10L2P0DP72 767 aa16.26■□□□□ 0.19
SKP2-208ENST00000546211 SURF2Q15527 256 aaPredicted RBP16.26■□□□□ 0.19
SKP2-208ENST00000546211 C4orf46Q504U0 113 aa16.26■□□□□ 0.19
SKP2-208ENST00000546211 RAB1BQ9H0U4 201 aa16.26■□□□□ 0.19
SKP2-208ENST00000546211 ZNF665Q9H7R5 613 aa16.26■□□□□ 0.19
SKP2-208ENST00000546211 MBNL3Q9NUK0 354 aaKnown RBP16.26■□□□□ 0.19
SKP2-208ENST00000546211 KCNIP1Q9NZI2 227 aa16.26■□□□□ 0.19
SKP2-208ENST00000546211 KIF25Q9UIL4 384 aa16.26■□□□□ 0.19
SKP2-208ENST00000546211 PPIAL4EA0A075B759 164 aa16.26■□□□□ 0.19
SKP2-208ENST00000546211 MEIKINA0A087WXM9 373 aa16.26■□□□□ 0.19
SKP2-208ENST00000546211 SNRPGP15A8MWD9 76 aa16.26■□□□□ 0.19
SKP2-208ENST00000546211 PPIAL4DF5H284 164 aa16.26■□□□□ 0.19
SKP2-208ENST00000546211 MGST3O14880 152 aa16.26■□□□□ 0.19
SKP2-208ENST00000546211 BET1O15155 118 aa16.26■□□□□ 0.19
SKP2-208ENST00000546211 SSNA1O43805 119 aa16.26■□□□□ 0.19
SKP2-208ENST00000546211 CCNKO75909 580 aa16.26■□□□□ 0.19
SKP2-208ENST00000546211 TK1P04183 234 aa16.26■□□□□ 0.19
SKP2-208ENST00000546211 PPIAL4FP0DN26 164 aa16.26■□□□□ 0.19
SKP2-208ENST00000546211 PGAM2P15259 253 aa16.26■□□□□ 0.19
SKP2-208ENST00000546211 FCGR2CP31995 323 aa16.26■□□□□ 0.19
SKP2-208ENST00000546211 PAX5Q02548 391 aa16.26■□□□□ 0.19
SKP2-208ENST00000546211 ZNF660Q6AZW8 331 aaPredicted RBP16.26■□□□□ 0.19
SKP2-208ENST00000546211 C11orf71Q6IPW1 123 aa16.26■□□□□ 0.19
SKP2-208ENST00000546211 SDSLQ96GA7 329 aa16.26■□□□□ 0.19
SKP2-208ENST00000546211 COQ2Q96H96 371 aa16.26■□□□□ 0.19
SKP2-208ENST00000546211 ZNF69Q9UC07 566 aa16.26■□□□□ 0.19
SKP2-208ENST00000546211 GPR132Q9UNW8 380 aa16.26■□□□□ 0.19
SKP2-208ENST00000546211 PPIAL4AQ9Y536 164 aa16.26■□□□□ 0.19
SKP2-208ENST00000546211 TRAV39A0A0B4J263 110 aa16.25■□□□□ 0.19
SKP2-208ENST00000546211 NKX6-3A6NJ46 265 aa16.25■□□□□ 0.19
SKP2-208ENST00000546211 K7N7A8 449 aa16.25■□□□□ 0.19
SKP2-208ENST00000546211 GYPAP02724 150 aa16.25■□□□□ 0.19
SKP2-208ENST00000546211 OR4E1P0C645 316 aa16.25■□□□□ 0.19
SKP2-208ENST00000546211 TAS2R31P59538 309 aa16.25■□□□□ 0.19
SKP2-208ENST00000546211 HFEQ30201 348 aa16.25■□□□□ 0.19
SKP2-208ENST00000546211 ZNF626Q68DY1 528 aa16.25■□□□□ 0.19
SKP2-208ENST00000546211 PEG10Q86TG7 708 aaKnown RBP16.25■□□□□ 0.19
SKP2-208ENST00000546211 DTX2Q86UW9 622 aa16.25■□□□□ 0.19
SKP2-208ENST00000546211 SLC25A42Q86VD7 318 aa16.25■□□□□ 0.19
SKP2-208ENST00000546211 ZNRF1Q8ND25 227 aa16.25■□□□□ 0.19
SKP2-208ENST00000546211 OR5D13Q8NGL4 314 aa16.25■□□□□ 0.19
SKP2-208ENST00000546211 TMPRSS13Q9BYE2 586 aa16.25■□□□□ 0.19
SKP2-208ENST00000546211 PCDHB10Q9UN67 800 aa16.25■□□□□ 0.19
SKP2-208ENST00000546211 MAB21L2Q9Y586 359 aa16.25■□□□□ 0.19
SKP2-208ENST00000546211 ICE1Q9Y2F5 2266 aa16.25■□□□□ 0.19
SKP2-208ENST00000546211 DYSFO75923 2080 aa16.25■□□□□ 0.19
SKP2-208ENST00000546211 DIRAS3O95661 229 aa16.24■□□□□ 0.19
SKP2-208ENST00000546211 CD8AP01732 235 aa16.24■□□□□ 0.19
SKP2-208ENST00000546211 HNRNPCP07910 306 aaKnown RBP eCLIP16.24■□□□□ 0.19
SKP2-208ENST00000546211 SOD3P08294 240 aa16.24■□□□□ 0.19
SKP2-208ENST00000546211 DANCRP0C864 163 aa16.24■□□□□ 0.19
SKP2-208ENST00000546211 HERV-K104P61576 105 aa16.24■□□□□ 0.19
SKP2-208ENST00000546211 EDDM3AQ14507 147 aa16.24■□□□□ 0.19
SKP2-208ENST00000546211 C6orf183Q5T699 404 aa16.24■□□□□ 0.19
SKP2-208ENST00000546211 CD276Q5ZPR3 534 aa16.24■□□□□ 0.19
SKP2-208ENST00000546211 FAHD2BQ6P2I3 314 aaPredicted RBP16.24■□□□□ 0.19
SKP2-208ENST00000546211 ZNF788Q6ZQV5 615 aa16.24■□□□□ 0.19
SKP2-208ENST00000546211 CAPSLQ8WWF8 208 aa16.24■□□□□ 0.19
SKP2-208ENST00000546211 FAHD2AQ96GK7 314 aa16.24■□□□□ 0.19
SKP2-208ENST00000546211 GAFA1Q96PS6 74 aa16.24■□□□□ 0.19
SKP2-208ENST00000546211 CABLES2Q9BTV7 478 aa16.24■□□□□ 0.19
SKP2-208ENST00000546211 UBTD1Q9HAC8 227 aa16.24■□□□□ 0.19
SKP2-208ENST00000546211 C14orf166Q9Y224 244 aaKnown RBP16.24■□□□□ 0.19
SKP2-208ENST00000546211 CACNA1DQ01668 2161 aa16.23■□□□□ 0.19
SKP2-208ENST00000546211 A0A1W2PPR1 153 aa16.23■□□□□ 0.19
SKP2-208ENST00000546211 RNF224P0DH78 156 aa16.23■□□□□ 0.19
SKP2-208ENST00000546211 NFYAP23511 347 aaPredicted RBP16.23■□□□□ 0.19
SKP2-208ENST00000546211 GLIPR1P48060 266 aa16.23■□□□□ 0.19
SKP2-208ENST00000546211 BAMBIQ13145 260 aa16.23■□□□□ 0.19
SKP2-208ENST00000546211 HERPUD1Q15011 391 aa16.23■□□□□ 0.19
SKP2-208ENST00000546211 HMGN3Q15651 99 aa16.23■□□□□ 0.19
SKP2-208ENST00000546211 C5orf24Q7Z6I8 188 aa16.23■□□□□ 0.19
SKP2-208ENST00000546211 OR52B4Q8NGK2 314 aa16.23■□□□□ 0.19
SKP2-208ENST00000546211 ZFAND1Q8TCF1 268 aa16.23■□□□□ 0.19
SKP2-208ENST00000546211 KIRREL1Q96J84 757 aa16.23■□□□□ 0.19
SKP2-208ENST00000546211 CCL13Q99616 98 aa16.23■□□□□ 0.19
SKP2-208ENST00000546211 TRAF4Q9BUZ4 470 aaPredicted RBP16.23■□□□□ 0.19
SKP2-208ENST00000546211 DNTTIP1Q9H147 329 aa16.23■□□□□ 0.19
SKP2-208ENST00000546211 LIME1Q9H400 295 aa16.23■□□□□ 0.19
SKP2-208ENST00000546211 TAF9BQ9HBM6 251 aa16.23■□□□□ 0.19
SKP2-208ENST00000546211 IGKV1-6A0A0C4DH72 117 aa16.22■□□□□ 0.19
SKP2-208ENST00000546211 ZNF728P0DKX0 622 aa16.22■□□□□ 0.19
SKP2-208ENST00000546211 AKR1C4P17516 323 aa16.22■□□□□ 0.19
SKP2-208ENST00000546211 FXYD4P59646 89 aa16.22■□□□□ 0.19
SKP2-208ENST00000546211 IL13RA1P78552 427 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms