RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 OTUD6BQ8N6M0 293 aa1.97□□□□□ -2.09
SNHG1-224ENST00000545688 ZIC4Q8N9L1 334 aa1.97□□□□□ -2.09
SNHG1-224ENST00000545688 OR7G2Q8NG99 324 aa1.97□□□□□ -2.09
SNHG1-224ENST00000545688 OR52E4Q8NGH9 312 aa1.97□□□□□ -2.09
SNHG1-224ENST00000545688 UBE2E3Q969T4 207 aa1.97□□□□□ -2.09
SNHG1-224ENST00000545688 RBMXL1Q96E39 390 aaKnown RBP1.97□□□□□ -2.09
SNHG1-224ENST00000545688 ZNF75AQ96N20 296 aa1.97□□□□□ -2.09
SNHG1-224ENST00000545688 ZNF317Q96PQ6 595 aaPredicted RBP1.97□□□□□ -2.09
SNHG1-224ENST00000545688 SLC38A2Q96QD8 506 aa1.97□□□□□ -2.09
SNHG1-224ENST00000545688 TSGA10Q9BZW7 698 aa1.97□□□□□ -2.09
SNHG1-224ENST00000545688 DERL2Q9GZP9 239 aa1.97□□□□□ -2.09
SNHG1-224ENST00000545688 TMEM185BQ9H7F4 350 aa1.97□□□□□ -2.09
SNHG1-224ENST00000545688 C20orf96Q9NUD7 363 aaPredicted RBP1.97□□□□□ -2.09
SNHG1-224ENST00000545688 ZNRD1Q9P1U0 126 aa1.97□□□□□ -2.09
SNHG1-224ENST00000545688 TFR2Q9UP52 801 aa1.97□□□□□ -2.09
SNHG1-224ENST00000545688 ACOT9Q9Y305 439 aa1.97□□□□□ -2.09
SNHG1-224ENST00000545688 DNAH17Q9UFH2 4485 aa1.96□□□□□ -2.1
SNHG1-224ENST00000545688 IGLV1-50A0A075B6I6 118 aa1.96□□□□□ -2.1
SNHG1-224ENST00000545688 IGLV3-9A0A075B6K5 115 aa1.96□□□□□ -2.1
SNHG1-224ENST00000545688 IGHV3-15A0A0B4J1V0 119 aa1.96□□□□□ -2.1
SNHG1-224ENST00000545688 MDFIC2A0A1B0GVS7 189 aa1.96□□□□□ -2.1
SNHG1-224ENST00000545688 A0A1W2PQD3 144 aa1.96□□□□□ -2.1
SNHG1-224ENST00000545688 CIB4A0PJX0 185 aa1.96□□□□□ -2.1
SNHG1-224ENST00000545688 A8MUU9 505 aa1.96□□□□□ -2.1
SNHG1-224ENST00000545688 C9JVG2 144 aa1.96□□□□□ -2.1
SNHG1-224ENST00000545688 MGRN1O60291 552 aa1.96□□□□□ -2.1
SNHG1-224ENST00000545688 ERLIN1O75477 346 aa1.96□□□□□ -2.1
SNHG1-224ENST00000545688 UTS2O95399 124 aa1.96□□□□□ -2.1
SNHG1-224ENST00000545688 TTC4O95801 387 aa1.96□□□□□ -2.1
SNHG1-224ENST00000545688 IFNB1P01574 187 aa1.96□□□□□ -2.1
SNHG1-224ENST00000545688 IGHMP01871 453 aa1.96□□□□□ -2.1
SNHG1-224ENST00000545688 PRPS2P11908 318 aa1.96□□□□□ -2.1
SNHG1-224ENST00000545688 ME2P23368 584 aa1.96□□□□□ -2.1
SNHG1-224ENST00000545688 IL12BP29460 328 aa1.96□□□□□ -2.1
SNHG1-224ENST00000545688 LCN1P31025 176 aa1.96□□□□□ -2.1
SNHG1-224ENST00000545688 GLRXP35754 106 aa1.96□□□□□ -2.1
SNHG1-224ENST00000545688 CRYBB2P43320 205 aa1.96□□□□□ -2.1
SNHG1-224ENST00000545688 MAGEA1P43355 309 aa1.96□□□□□ -2.1
SNHG1-224ENST00000545688 BPIFB3P59826 476 aa1.96□□□□□ -2.1
SNHG1-224ENST00000545688 ESRRGP62508 458 aa1.96□□□□□ -2.1
SNHG1-224ENST00000545688 RAP1AP62834 184 aa1.96□□□□□ -2.1
SNHG1-224ENST00000545688 PJVKQ0ZLH3 352 aa1.96□□□□□ -2.1
SNHG1-224ENST00000545688 FOXF1Q12946 379 aa1.96□□□□□ -2.1
SNHG1-224ENST00000545688 PDIA2Q13087 525 aaKnown RBP1.96□□□□□ -2.1
SNHG1-224ENST00000545688 STX5Q13190 355 aa1.96□□□□□ -2.1
SNHG1-224ENST00000545688 OR4D1Q15615 310 aa1.96□□□□□ -2.1
SNHG1-224ENST00000545688 TSNQ15631 228 aaKnown RBP1.96□□□□□ -2.1
SNHG1-224ENST00000545688 TRIP13Q15645 432 aaPredicted RBP1.96□□□□□ -2.1
SNHG1-224ENST00000545688 TOMM34Q15785 309 aaPredicted RBP1.96□□□□□ -2.1
SNHG1-224ENST00000545688 DEFB112Q30KQ8 113 aa1.96□□□□□ -2.1
SNHG1-224ENST00000545688 TMEM176BQ3YBM2 270 aaPredicted RBP1.96□□□□□ -2.1
SNHG1-224ENST00000545688 ZBED5Q49AG3 693 aa1.96□□□□□ -2.1
SNHG1-224ENST00000545688 FBXO48Q5FWF7 155 aa1.96□□□□□ -2.1
SNHG1-224ENST00000545688 FAM45BPQ6NSW5 357 aa1.96□□□□□ -2.1
SNHG1-224ENST00000545688 PGAP1Q75T13 922 aa1.96□□□□□ -2.1
SNHG1-224ENST00000545688 WDR86Q86TI4 376 aa1.96□□□□□ -2.1
SNHG1-224ENST00000545688 WDFY1Q8IWB7 410 aa1.96□□□□□ -2.1
SNHG1-224ENST00000545688 OR9A2Q8NGT5 310 aa1.96□□□□□ -2.1
SNHG1-224ENST00000545688 MUC7Q8TAX7 377 aa1.96□□□□□ -2.1
SNHG1-224ENST00000545688 FAM45AQ8TCE6 357 aa1.96□□□□□ -2.1
SNHG1-224ENST00000545688 MGARPQ8TDB4 240 aa1.96□□□□□ -2.1
SNHG1-224ENST00000545688 GPR119Q8TDV5 335 aa1.96□□□□□ -2.1
SNHG1-224ENST00000545688 C10orf82Q8WW14 230 aa1.96□□□□□ -2.1
SNHG1-224ENST00000545688 MAIP1Q8WWC4 291 aa1.96□□□□□ -2.1
SNHG1-224ENST00000545688 C1orf54Q8WWF1 131 aa1.96□□□□□ -2.1
SNHG1-224ENST00000545688 APH1AQ96BI3 265 aa1.96□□□□□ -2.1
SNHG1-224ENST00000545688 SH3YL1Q96HL8 342 aaPredicted RBP1.96□□□□□ -2.1
SNHG1-224ENST00000545688 CCDC42Q96M95 316 aa1.96□□□□□ -2.1
SNHG1-224ENST00000545688 TMEM237Q96Q45 408 aa1.96□□□□□ -2.1
SNHG1-224ENST00000545688 RBBP8Q99708 897 aa1.96□□□□□ -2.1
SNHG1-224ENST00000545688 CHAC1Q9BUX1 264 aa1.96□□□□□ -2.1
SNHG1-224ENST00000545688 MRPL37Q9BZE1 423 aaKnown RBP1.96□□□□□ -2.1
SNHG1-224ENST00000545688 POPDC3Q9HBV1 291 aa1.96□□□□□ -2.1
SNHG1-224ENST00000545688 TAS2R9Q9NYW1 312 aa1.96□□□□□ -2.1
SNHG1-224ENST00000545688 TAS2R7Q9NYW3 318 aa1.96□□□□□ -2.1
SNHG1-224ENST00000545688 XCL2Q9UBD3 114 aa1.96□□□□□ -2.1
SNHG1-224ENST00000545688 RPUSD1Q9UJJ7 312 aaKnown RBP1.96□□□□□ -2.1
SNHG1-224ENST00000545688 U3KQK5 164 aa1.96□□□□□ -2.1
SNHG1-224ENST00000545688 DSPPQ9NZW4 1301 aa1.95□□□□□ -2.1
SNHG1-224ENST00000545688 LRP1BQ9NZR2 4599 aa1.95□□□□□ -2.1
SNHG1-224ENST00000545688 UQCRHLA0A096LP55 91 aa1.95□□□□□ -2.1
SNHG1-224ENST00000545688 MIF4GDA9UHW6 222 aaKnown RBP1.95□□□□□ -2.1
SNHG1-224ENST00000545688 K7EPI3 171 aa1.95□□□□□ -2.1
SNHG1-224ENST00000545688 M0R233 179 aa1.95□□□□□ -2.1
SNHG1-224ENST00000545688 UPK1AO00322 258 aa1.95□□□□□ -2.1
SNHG1-224ENST00000545688 GPR171O14626 319 aa1.95□□□□□ -2.1
SNHG1-224ENST00000545688 MRPL33O75394 65 aaKnown RBP1.95□□□□□ -2.1
SNHG1-224ENST00000545688 OXSR1O95747 527 aaPredicted RBP1.95□□□□□ -2.1
SNHG1-224ENST00000545688 KLK1P06870 262 aa1.95□□□□□ -2.1
SNHG1-224ENST00000545688 ERCC1P07992 297 aaPredicted RBP1.95□□□□□ -2.1
SNHG1-224ENST00000545688 CBR1P16152 277 aa1.95□□□□□ -2.1
SNHG1-224ENST00000545688 DDOSTP39656 456 aa1.95□□□□□ -2.1
SNHG1-224ENST00000545688 GSSP48637 474 aa1.95□□□□□ -2.1
SNHG1-224ENST00000545688 P2RX1P51575 399 aa1.95□□□□□ -2.1
SNHG1-224ENST00000545688 RAP1GDS1P52306 607 aa1.95□□□□□ -2.1
SNHG1-224ENST00000545688 BASP1P80723 227 aaKnown RBP1.95□□□□□ -2.1
SNHG1-224ENST00000545688 ZNF117Q03924 483 aa1.95□□□□□ -2.1
SNHG1-224ENST00000545688 SELENBP1Q13228 472 aa1.95□□□□□ -2.1
SNHG1-224ENST00000545688 ATP6AP1LQ52LC2 224 aa1.95□□□□□ -2.1
SNHG1-224ENST00000545688 HIKESHIQ53FT3 197 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms