RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 K7N7A8 449 aa25.41■■□□□ 1.66
CCM2-219ENST00000544363 ZNF788Q6ZQV5 615 aa25.41■■□□□ 1.66
CCM2-219ENST00000544363 LHFPL1Q86WI0 220 aa25.41■■□□□ 1.66
CCM2-219ENST00000544363 ZNRF1Q8ND25 227 aa25.41■■□□□ 1.66
CCM2-219ENST00000544363 OR6F1Q8NGZ6 308 aa25.41■■□□□ 1.66
CCM2-219ENST00000544363 MBNL3Q9NUK0 354 aaKnown RBP25.41■■□□□ 1.66
CCM2-219ENST00000544363 RAI1Q7Z5J4 1906 aaPredicted RBP25.41■■□□□ 1.66
CCM2-219ENST00000544363 DSCAMO60469 2012 aa25.41■■□□□ 1.66
CCM2-219ENST00000544363 SCTP09683 121 aa25.41■■□□□ 1.66
CCM2-219ENST00000544363 MECP2P51608 486 aaKnown RBP25.41■■□□□ 1.66
CCM2-219ENST00000544363 HLA-DRB3P79483 266 aa25.41■■□□□ 1.66
CCM2-219ENST00000544363 KRBOX4Q5JUW0 171 aa25.41■■□□□ 1.66
CCM2-219ENST00000544363 ATPAF1Q5TC12 328 aaPredicted RBP25.41■■□□□ 1.66
CCM2-219ENST00000544363 NEU4Q8WWR8 484 aaPredicted RBP25.41■■□□□ 1.66
CCM2-219ENST00000544363 GAFA1Q96PS6 74 aa25.41■■□□□ 1.66
CCM2-219ENST00000544363 KIF25Q9UIL4 384 aa25.41■■□□□ 1.66
CCM2-219ENST00000544363 MGST3O14880 152 aa25.4■■□□□ 1.66
CCM2-219ENST00000544363 RLN1P04808 185 aa25.4■■□□□ 1.66
CCM2-219ENST00000544363 COL8A2P25067 703 aa25.4■■□□□ 1.66
CCM2-219ENST00000544363 CARTPTQ16568 116 aa25.4■■□□□ 1.66
CCM2-219ENST00000544363 IGSF11Q5DX21 431 aa25.4■■□□□ 1.66
CCM2-219ENST00000544363 DHRS11Q6UWP2 260 aa25.4■■□□□ 1.66
CCM2-219ENST00000544363 C5orf24Q7Z6I8 188 aa25.4■■□□□ 1.66
CCM2-219ENST00000544363 CCL13Q99616 98 aa25.4■■□□□ 1.66
CCM2-219ENST00000544363 HRNRQ86YZ3 2850 aaPredicted RBP25.4■■□□□ 1.66
CCM2-219ENST00000544363 TRAV39A0A0B4J263 110 aa25.39■■□□□ 1.66
CCM2-219ENST00000544363 TK1P04183 234 aa25.39■■□□□ 1.66
CCM2-219ENST00000544363 TLE4Q04727 773 aa25.39■■□□□ 1.66
CCM2-219ENST00000544363 ZNF660Q6AZW8 331 aaPredicted RBP25.39■■□□□ 1.66
CCM2-219ENST00000544363 ZDHHC22Q8N966 263 aa25.39■■□□□ 1.66
CCM2-219ENST00000544363 OR5D13Q8NGL4 314 aa25.39■■□□□ 1.66
CCM2-219ENST00000544363 GIMAP1Q8WWP7 306 aa25.39■■□□□ 1.66
CCM2-219ENST00000544363 BEX2Q9BXY8 128 aa25.39■■□□□ 1.66
CCM2-219ENST00000544363 DNTTIP1Q9H147 329 aa25.39■■□□□ 1.66
CCM2-219ENST00000544363 BEX1Q9HBH7 125 aa25.39■■□□□ 1.66
CCM2-219ENST00000544363 CTXN2P0C2S0 81 aa25.38■■□□□ 1.65
CCM2-219ENST00000544363 ANXA7P20073 488 aaKnown RBP25.38■■□□□ 1.65
CCM2-219ENST00000544363 AADACL3Q5VUY0 350 aa25.38■■□□□ 1.65
CCM2-219ENST00000544363 OR4A4PQ8NGN8 299 aa25.38■■□□□ 1.65
CCM2-219ENST00000544363 ZNF2Q9BSG1 426 aaPredicted RBP25.38■■□□□ 1.65
CCM2-219ENST00000544363 DLL4Q9NR61 685 aa25.38■■□□□ 1.65
CCM2-219ENST00000544363 VSIG4Q9Y279 399 aa25.38■■□□□ 1.65
CCM2-219ENST00000544363 MEIKINA0A087WXM9 373 aa25.37■■□□□ 1.65
CCM2-219ENST00000544363 CLEC18AA5D8T8 446 aa25.37■■□□□ 1.65
CCM2-219ENST00000544363 SIGLEC5O15389 551 aa25.37■■□□□ 1.65
CCM2-219ENST00000544363 PRAF2O60831 178 aa25.37■■□□□ 1.65
CCM2-219ENST00000544363 CLDN1O95832 211 aa25.37■■□□□ 1.65
CCM2-219ENST00000544363 GLIPR1P48060 266 aa25.37■■□□□ 1.65
CCM2-219ENST00000544363 SEC61A1P61619 476 aaKnown RBP25.37■■□□□ 1.65
CCM2-219ENST00000544363 CLEC18BQ6UXF7 455 aa25.37■■□□□ 1.65
CCM2-219ENST00000544363 CLEC18CQ8NCF0 446 aa25.37■■□□□ 1.65
CCM2-219ENST00000544363 FAM234AQ9H0X4 552 aa25.37■■□□□ 1.65
CCM2-219ENST00000544363 MYOZ1Q9NP98 299 aaPredicted RBP25.37■■□□□ 1.65
CCM2-219ENST00000544363 CHD6Q8TD26 2715 aa25.37■■□□□ 1.65
CCM2-219ENST00000544363 C7orf66A4D0T2 115 aa25.37■■□□□ 1.65
CCM2-219ENST00000544363 NKX6-3A6NJ46 265 aa25.37■■□□□ 1.65
CCM2-219ENST00000544363 CEACAM18A8MTB9 384 aa25.37■■□□□ 1.65
CCM2-219ENST00000544363 LYNX1G3V0Z9 82 aa25.37■■□□□ 1.65
CCM2-219ENST00000544363 PFDN1O60925 122 aa25.37■■□□□ 1.65
CCM2-219ENST00000544363 LYNX1P0DP58 116 aa25.37■■□□□ 1.65
CCM2-219ENST00000544363 SELLP14151 372 aa25.37■■□□□ 1.65
CCM2-219ENST00000544363 GLP1RP43220 463 aa25.37■■□□□ 1.65
CCM2-219ENST00000544363 EDDM3AQ14507 147 aa25.37■■□□□ 1.65
CCM2-219ENST00000544363 HERPUD1Q15011 391 aa25.37■■□□□ 1.65
CCM2-219ENST00000544363 MARCH1Q8TCQ1 289 aa25.37■■□□□ 1.65
CCM2-219ENST00000544363 LIME1Q9H400 295 aa25.37■■□□□ 1.65
CCM2-219ENST00000544363 A0A0A6YYJ9 748 aa25.36■■□□□ 1.65
CCM2-219ENST00000544363 A0A1B0GW55 424 aa25.36■■□□□ 1.65
CCM2-219ENST00000544363 OR5H14A6NHG9 310 aa25.36■■□□□ 1.65
CCM2-219ENST00000544363 DUX4L2P0CJ85 424 aa25.36■■□□□ 1.65
CCM2-219ENST00000544363 DUX4L3P0CJ86 424 aa25.36■■□□□ 1.65
CCM2-219ENST00000544363 DUX4L4P0CJ87 422 aa25.36■■□□□ 1.65
CCM2-219ENST00000544363 DUX4L5P0CJ88 424 aa25.36■■□□□ 1.65
CCM2-219ENST00000544363 DUX4L6P0CJ89 424 aa25.36■■□□□ 1.65
CCM2-219ENST00000544363 DUX4L7P0CJ90 424 aa25.36■■□□□ 1.65
CCM2-219ENST00000544363 PLA2G2AP14555 144 aa25.36■■□□□ 1.65
CCM2-219ENST00000544363 NPY4RP50391 375 aa25.36■■□□□ 1.65
CCM2-219ENST00000544363 IL13RA1P78552 427 aa25.36■■□□□ 1.65
CCM2-219ENST00000544363 MRPS11P82912 194 aaKnown RBP25.36■■□□□ 1.65
CCM2-219ENST00000544363 DUX4L9Q6RFH8 374 aaPredicted RBP25.36■■□□□ 1.65
CCM2-219ENST00000544363 TPRX1Q8N7U7 411 aa25.36■■□□□ 1.65
CCM2-219ENST00000544363 DUX4Q9UBX2 424 aa25.36■■□□□ 1.65
CCM2-219ENST00000544363 IGKV1-6A0A0C4DH72 117 aa25.35■■□□□ 1.65
CCM2-219ENST00000544363 TNFRSF13BO14836 293 aaPredicted RBP25.35■■□□□ 1.65
CCM2-219ENST00000544363 RP2O75695 350 aa25.35■■□□□ 1.65
CCM2-219ENST00000544363 IL5P05113 134 aa25.35■■□□□ 1.65
CCM2-219ENST00000544363 FCGR2CP31995 323 aa25.35■■□□□ 1.65
CCM2-219ENST00000544363 HMGN3Q15651 99 aa25.35■■□□□ 1.65
CCM2-219ENST00000544363 SLC36A1Q7Z2H8 476 aa25.35■■□□□ 1.65
CCM2-219ENST00000544363 FAM216BQ8N7L0 139 aa25.35■■□□□ 1.65
CCM2-219ENST00000544363 TMEM185AQ8NFB2 350 aa25.35■■□□□ 1.65
CCM2-219ENST00000544363 MED30Q96HR3 178 aa25.35■■□□□ 1.65
CCM2-219ENST00000544363 SCGB3A2Q96PL1 93 aa25.35■■□□□ 1.65
CCM2-219ENST00000544363 CABLES2Q9BTV7 478 aa25.35■■□□□ 1.65
CCM2-219ENST00000544363 TMPRSS13Q9BYE2 586 aa25.35■■□□□ 1.65
CCM2-219ENST00000544363 ALX4Q9H161 411 aaPredicted RBP25.35■■□□□ 1.65
CCM2-219ENST00000544363 GHITMQ9H3K2 345 aa25.35■■□□□ 1.65
CCM2-219ENST00000544363 TAF9BQ9HBM6 251 aa25.35■■□□□ 1.65
CCM2-219ENST00000544363 KCNIP1Q9NZI2 227 aa25.35■■□□□ 1.65
CCM2-219ENST00000544363 PCDHB10Q9UN67 800 aa25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms