RNA–Protein interactions for RNA: ENST00000544327.1

SCARB1-208, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 1,812 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-208ENST00000544327 FAM76BQ5HYJ3 339 aa15.1■□□□□ 0.01
SCARB1-208ENST00000544327 SPIN3Q5JUX0 258 aa15.1■□□□□ 0.01
SCARB1-208ENST00000544327 OR2T2Q6IF00 324 aa15.1■□□□□ 0.01
SCARB1-208ENST00000544327 Q6P435 159 aa15.1■□□□□ 0.01
SCARB1-208ENST00000544327 C5orf24Q7Z6I8 188 aa15.1■□□□□ 0.01
SCARB1-208ENST00000544327 OR5D13Q8NGL4 314 aa15.1■□□□□ 0.01
SCARB1-208ENST00000544327 LILRB1Q8NHL6 650 aaPredicted RBP15.1■□□□□ 0.01
SCARB1-208ENST00000544327 TMEM231Q9H6L2 316 aa15.1■□□□□ 0.01
SCARB1-208ENST00000544327 DLL3Q9NYJ7 618 aa15.1■□□□□ 0.01
SCARB1-208ENST00000544327 FAM96BQ9Y3D0 163 aa15.1■□□□□ 0.01
SCARB1-208ENST00000544327 ZNF407Q9C0G0 2248 aa15.09■□□□□ 0.01
SCARB1-208ENST00000544327 FAM157AC9JC47 383 aa15.09■□□□□ 0.01
SCARB1-208ENST00000544327 MDH2P40926 338 aaKnown RBP15.09■□□□□ 0.01
SCARB1-208ENST00000544327 NKX2-1P43699 371 aaPredicted RBP15.09■□□□□ 0.01
SCARB1-208ENST00000544327 TNFSF10P50591 281 aa15.09■□□□□ 0.01
SCARB1-208ENST00000544327 NOVA1P51513 510 aaKnown RBP15.09■□□□□ 0.01
SCARB1-208ENST00000544327 DVL1P1P54792 670 aaPredicted RBP15.09■□□□□ 0.01
SCARB1-208ENST00000544327 SHEQ5VZ18 495 aa15.09■□□□□ 0.01
SCARB1-208ENST00000544327 ZNF324BQ6AW86 544 aaPredicted RBP15.09■□□□□ 0.01
SCARB1-208ENST00000544327 Q8IYB0 196 aa15.09■□□□□ 0.01
SCARB1-208ENST00000544327 CMTM1Q8IZ96 169 aa15.09■□□□□ 0.01
SCARB1-208ENST00000544327 H1FOOQ8IZA3 346 aaPredicted RBP15.09■□□□□ 0.01
SCARB1-208ENST00000544327 ZNF488Q96MN9 340 aa15.09■□□□□ 0.01
SCARB1-208ENST00000544327 RTL8AQ9BWD3 113 aa15.09■□□□□ 0.01
SCARB1-208ENST00000544327 CLCF1Q9UBD9 225 aa15.09■□□□□ 0.01
SCARB1-208ENST00000544327 STRAPQ9Y3F4 350 aaKnown RBP15.09■□□□□ 0.01
SCARB1-208ENST00000544327 AHCTF1Q8WYP5 2266 aa15.09■□□□□ 0.01
SCARB1-208ENST00000544327 LRP5LA4QPB2 252 aa15.08■□□□□ 0.01
SCARB1-208ENST00000544327 HSPB6O14558 160 aa15.08■□□□□ 0.01
SCARB1-208ENST00000544327 DEGS1O15121 323 aa15.08■□□□□ 0.01
SCARB1-208ENST00000544327 IGHG3P01860 377 aa15.08■□□□□ 0.01
SCARB1-208ENST00000544327 DMDP11532 3685 aa15.08■□□□□ 0.01
SCARB1-208ENST00000544327 PVALBP20472 110 aaPredicted RBP15.08■□□□□ 0.01
SCARB1-208ENST00000544327 VDAC1P21796 283 aa15.08■□□□□ 0.01
SCARB1-208ENST00000544327 CA6P23280 308 aa15.08■□□□□ 0.01
SCARB1-208ENST00000544327 LMO1P25800 156 aa15.08■□□□□ 0.01
SCARB1-208ENST00000544327 EWSR1Q01844 656 aaKnown RBP eCLIP15.08■□□□□ 0.01
SCARB1-208ENST00000544327 MRPL49Q13405 166 aaKnown RBP15.08■□□□□ 0.01
SCARB1-208ENST00000544327 TRIP6Q15654 476 aaKnown RBP15.08■□□□□ 0.01
SCARB1-208ENST00000544327 C20orf204Q6ZNR8 217 aa15.08■□□□□ 0.01
SCARB1-208ENST00000544327 MOB1BQ7L9L4 216 aa15.08■□□□□ 0.01
SCARB1-208ENST00000544327 OR2C3Q8N628 320 aa15.08■□□□□ 0.01
SCARB1-208ENST00000544327 CCL28Q9NRJ3 127 aa15.08■□□□□ 0.01
SCARB1-208ENST00000544327 SMPD2O60906 423 aa15.08■□□□□ 0
SCARB1-208ENST00000544327 CLEC9AQ6UXN8 241 aa15.08■□□□□ 0
SCARB1-208ENST00000544327 PIP4P1Q86T03 277 aa15.08■□□□□ 0
SCARB1-208ENST00000544327 KIRREL1Q96J84 757 aa15.08■□□□□ 0
SCARB1-208ENST00000544327 LUZP4Q9P127 313 aa15.08■□□□□ 0
SCARB1-208ENST00000544327 NDRG3Q9UGV2 375 aa15.08■□□□□ 0
SCARB1-208ENST00000544327 OR2W1Q9Y3N9 320 aa15.08■□□□□ 0
SCARB1-208ENST00000544327 CDRT15L2A8MXV6 281 aa15.07■□□□□ 0
SCARB1-208ENST00000544327 HSD17B6O14756 317 aa15.07■□□□□ 0
SCARB1-208ENST00000544327 PITX3O75364 302 aa15.07■□□□□ 0
SCARB1-208ENST00000544327 PGLYRP1O75594 196 aaPredicted RBP15.07■□□□□ 0
SCARB1-208ENST00000544327 RHBDL1O75783 438 aa15.07■□□□□ 0
SCARB1-208ENST00000544327 OR8U9P0C7N5 309 aa15.07■□□□□ 0
SCARB1-208ENST00000544327 ERVK11-1P61568 191 aa15.07■□□□□ 0
SCARB1-208ENST00000544327 ID3Q02535 119 aa15.07■□□□□ 0
SCARB1-208ENST00000544327 NHLH2Q02577 135 aa15.07■□□□□ 0
SCARB1-208ENST00000544327 TGFBR3Q03167 851 aa15.07■□□□□ 0
SCARB1-208ENST00000544327 GUSBP1Q15486 140 aa15.07■□□□□ 0
SCARB1-208ENST00000544327 OR8U1Q8NH10 309 aa15.07■□□□□ 0
SCARB1-208ENST00000544327 LYRM2Q9NU23 88 aaPredicted RBP15.07■□□□□ 0
SCARB1-208ENST00000544327 CACFD1Q9UGQ2 172 aa15.07■□□□□ 0
SCARB1-208ENST00000544327 DNAJC13O75165 2243 aa15.06■□□□□ 0
SCARB1-208ENST00000544327 HS3ST1O14792 307 aa15.06■□□□□ 0
SCARB1-208ENST00000544327 ADAM20O43506 726 aa15.06■□□□□ 0
SCARB1-208ENST00000544327 HEXAP06865 529 aa15.06■□□□□ 0
SCARB1-208ENST00000544327 SFTA3P0C7M3 94 aa15.06■□□□□ 0
SCARB1-208ENST00000544327 SLC25A6P12236 298 aa15.06■□□□□ 0
SCARB1-208ENST00000544327 HOXB1P14653 301 aaPredicted RBP15.06■□□□□ 0
SCARB1-208ENST00000544327 IGHV1-2P23083 117 aa15.06■□□□□ 0
SCARB1-208ENST00000544327 S100GP29377 79 aa15.06■□□□□ 0
SCARB1-208ENST00000544327 PPP1CBP62140 327 aa15.06■□□□□ 0
SCARB1-208ENST00000544327 P4HA3Q7Z4N8 544 aa15.06■□□□□ 0
SCARB1-208ENST00000544327 C17orf78Q8N4C9 275 aa15.06■□□□□ 0
SCARB1-208ENST00000544327 OR10J5Q8NHC4 309 aa15.06■□□□□ 0
SCARB1-208ENST00000544327 PLPPR1Q8TBJ4 325 aa15.06■□□□□ 0
SCARB1-208ENST00000544327 RDH5Q92781 318 aa15.06■□□□□ 0
SCARB1-208ENST00000544327 AIFM2Q9BRQ8 373 aa15.06■□□□□ 0
SCARB1-208ENST00000544327 SLC25A31Q9H0C2 315 aa15.06■□□□□ 0
SCARB1-208ENST00000544327 PLEKHF2Q9H8W4 249 aa15.06■□□□□ 0
SCARB1-208ENST00000544327 POLDIP2Q9Y2S7 368 aa15.06■□□□□ 0
SCARB1-208ENST00000544327 COL6A3P12111 3177 aa15.06■□□□□ 0
SCARB1-208ENST00000544327 SNCAP37840 140 aa15.06■□□□□ 0
SCARB1-208ENST00000544327 NPBWR1P48145 328 aa15.06■□□□□ 0
SCARB1-208ENST00000544327 HMGN3Q15651 99 aa15.06■□□□□ 0
SCARB1-208ENST00000544327 GABRA6Q16445 453 aa15.06■□□□□ 0
SCARB1-208ENST00000544327 WDR86Q86TI4 376 aa15.06■□□□□ 0
SCARB1-208ENST00000544327 SCRT1Q9BWW7 348 aa15.06■□□□□ 0
SCARB1-208ENST00000544327 OR51B6Q9H340 312 aa15.06■□□□□ 0
SCARB1-208ENST00000544327 CDH20Q9HBT6 801 aa15.06■□□□□ 0
SCARB1-208ENST00000544327 IGSF23A1L1A6 192 aa15.05■□□□□ -0
SCARB1-208ENST00000544327 ATP6V1G2-DDX39BF2Z307 99 aa15.05■□□□□ -0
SCARB1-208ENST00000544327 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.05■□□□□ -0
SCARB1-208ENST00000544327 CNOT4O95628 575 aaKnown RBP15.05■□□□□ -0
SCARB1-208ENST00000544327 TSPAN15O95858 294 aa15.05■□□□□ -0
SCARB1-208ENST00000544327 ACAA1P09110 424 aaPredicted RBP15.05■□□□□ -0
SCARB1-208ENST00000544327 RAC2P15153 192 aa15.05■□□□□ -0
SCARB1-208ENST00000544327 F2RP25116 425 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 2293.7 ms