RNA–Protein interactions for RNA: ENST00000544268.5

CHFR-223, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 2,412 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-223ENST00000544268 SFTPBP07988 381 aa12.94□□□□□ -0.34
CHFR-223ENST00000544268 B4GALT1P15291 398 aa12.94□□□□□ -0.34
CHFR-223ENST00000544268 CD46P15529 392 aa12.94□□□□□ -0.34
CHFR-223ENST00000544268 CLDN15P56746 228 aa12.94□□□□□ -0.34
CHFR-223ENST00000544268 GRB2P62993 217 aaKnown RBP12.94□□□□□ -0.34
CHFR-223ENST00000544268 PLGLB1Q02325 96 aa12.94□□□□□ -0.34
CHFR-223ENST00000544268 RAB32Q13637 225 aa12.94□□□□□ -0.34
CHFR-223ENST00000544268 CFAP161Q6P656 301 aa12.94□□□□□ -0.34
CHFR-223ENST00000544268 TMEM251Q8N6I4 163 aa12.94□□□□□ -0.34
CHFR-223ENST00000544268 CSNK2A3Q8NEV1 391 aa12.94□□□□□ -0.34
CHFR-223ENST00000544268 OR10AD1Q8NGE0 317 aa12.94□□□□□ -0.34
CHFR-223ENST00000544268 C2orf50Q96LR7 162 aa12.94□□□□□ -0.34
CHFR-223ENST00000544268 NDUFAF3Q9BU61 184 aa12.94□□□□□ -0.34
CHFR-223ENST00000544268 CEP295Q9C0D2 2601 aa12.94□□□□□ -0.34
CHFR-223ENST00000544268 IGKV1-27A0A075B6S5 117 aa12.94□□□□□ -0.34
CHFR-223ENST00000544268 DHRS7CA6NNS2 312 aa12.94□□□□□ -0.34
CHFR-223ENST00000544268 TLX3O43711 291 aaPredicted RBP12.94□□□□□ -0.34
CHFR-223ENST00000544268 IGLV3-1P01715 115 aa12.94□□□□□ -0.34
CHFR-223ENST00000544268 CHRM2P08172 466 aa12.94□□□□□ -0.34
CHFR-223ENST00000544268 GFI1BQ5VTD9 330 aa12.94□□□□□ -0.34
CHFR-223ENST00000544268 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.94□□□□□ -0.34
CHFR-223ENST00000544268 FOXRED2Q8IWF2 684 aa12.94□□□□□ -0.34
CHFR-223ENST00000544268 GJC3Q8NFK1 279 aa12.94□□□□□ -0.34
CHFR-223ENST00000544268 PECRQ9BY49 303 aa12.94□□□□□ -0.34
CHFR-223ENST00000544268 EHFQ9NZC4 300 aa12.94□□□□□ -0.34
CHFR-223ENST00000544268 FOXD3Q9UJU5 478 aaPredicted RBP12.94□□□□□ -0.34
CHFR-223ENST00000544268 MMP24Q9Y5R2 645 aa12.94□□□□□ -0.34
CHFR-223ENST00000544268 BOD1L1Q8NFC6 3051 aa12.94□□□□□ -0.34
CHFR-223ENST00000544268 FAM221AA4D161 298 aa12.93□□□□□ -0.34
CHFR-223ENST00000544268 FOXI3A8MTJ6 420 aaPredicted RBP12.93□□□□□ -0.34
CHFR-223ENST00000544268 KLRC4-KLRK1H3BQV0 150 aa12.93□□□□□ -0.34
CHFR-223ENST00000544268 DHRS3O75911 302 aa12.93□□□□□ -0.34
CHFR-223ENST00000544268 SFT2D2O95562 160 aa12.93□□□□□ -0.34
CHFR-223ENST00000544268 THBS4P35443 961 aa12.93□□□□□ -0.34
CHFR-223ENST00000544268 GUCA1AP43080 201 aaPredicted RBP12.93□□□□□ -0.34
CHFR-223ENST00000544268 RAC3P60763 192 aa12.93□□□□□ -0.34
CHFR-223ENST00000544268 NKX6-1P78426 367 aaPredicted RBP12.93□□□□□ -0.34
CHFR-223ENST00000544268 IL15RAQ13261 267 aa12.93□□□□□ -0.34
CHFR-223ENST00000544268 ZNF766Q5HY98 468 aa12.93□□□□□ -0.34
CHFR-223ENST00000544268 OR5H2Q8NGV7 314 aa12.93□□□□□ -0.34
CHFR-223ENST00000544268 ADGRG7Q96K78 797 aa12.93□□□□□ -0.34
CHFR-223ENST00000544268 CNTNAP3Q9BZ76 1288 aa12.93□□□□□ -0.34
CHFR-223ENST00000544268 LIME1Q9H400 295 aa12.93□□□□□ -0.34
CHFR-223ENST00000544268 FAM230AA0A1W2PPH8 454 aa12.93□□□□□ -0.34
CHFR-223ENST00000544268 A8MXE2 369 aa12.93□□□□□ -0.34
CHFR-223ENST00000544268 CXCL13O43927 109 aa12.93□□□□□ -0.34
CHFR-223ENST00000544268 GSTP1P09211 210 aaKnown RBP12.93□□□□□ -0.34
CHFR-223ENST00000544268 TBPP20226 339 aa12.93□□□□□ -0.34
CHFR-223ENST00000544268 TNFSF10P50591 281 aa12.93□□□□□ -0.34
CHFR-223ENST00000544268 C10orf128Q5T292 105 aa12.93□□□□□ -0.34
CHFR-223ENST00000544268 POC1AQ8NBT0 407 aa12.93□□□□□ -0.34
CHFR-223ENST00000544268 OR13D1Q8NGV5 346 aa12.93□□□□□ -0.34
CHFR-223ENST00000544268 OR10D3Q8NH80 312 aa12.93□□□□□ -0.34
CHFR-223ENST00000544268 BSCL2Q96G97 398 aaPredicted RBP12.93□□□□□ -0.34
CHFR-223ENST00000544268 PBDC1Q9BVG4 233 aa12.93□□□□□ -0.34
CHFR-223ENST00000544268 ANAPC10Q9UM13 185 aa12.93□□□□□ -0.34
CHFR-223ENST00000544268 APC2O95996 2303 aa12.93□□□□□ -0.34
CHFR-223ENST00000544268 TMEM210A6NLX4 147 aa12.92□□□□□ -0.34
CHFR-223ENST00000544268 KLK10O43240 276 aa12.92□□□□□ -0.34
CHFR-223ENST00000544268 GLI4P10075 376 aa12.92□□□□□ -0.34
CHFR-223ENST00000544268 FABP4P15090 132 aa12.92□□□□□ -0.34
CHFR-223ENST00000544268 CHATP28329 748 aa12.92□□□□□ -0.34
CHFR-223ENST00000544268 IL2RGP31785 369 aa12.92□□□□□ -0.34
CHFR-223ENST00000544268 PDZD11Q5EBL8 140 aa12.92□□□□□ -0.34
CHFR-223ENST00000544268 ZFP62Q8NB50 900 aaPredicted RBP12.92□□□□□ -0.34
CHFR-223ENST00000544268 OR2V1Q8NHB1 315 aa12.92□□□□□ -0.34
CHFR-223ENST00000544268 V9GYS6 101 aa12.92□□□□□ -0.34
CHFR-223ENST00000544268 DOCK7Q96N67 2140 aa12.92□□□□□ -0.34
CHFR-223ENST00000544268 CIDEAO60543 219 aa12.92□□□□□ -0.34
CHFR-223ENST00000544268 DANCRP0C864 163 aa12.92□□□□□ -0.34
CHFR-223ENST00000544268 OPRM1P35372 400 aa12.92□□□□□ -0.34
CHFR-223ENST00000544268 ELOBQ15370 118 aa12.92□□□□□ -0.34
CHFR-223ENST00000544268 TAF9Q16594 264 aa12.92□□□□□ -0.34
CHFR-223ENST00000544268 C5orf24Q7Z6I8 188 aa12.92□□□□□ -0.34
CHFR-223ENST00000544268 FAM89BQ8N5H3 189 aa12.92□□□□□ -0.34
CHFR-223ENST00000544268 CPEB3Q8NE35 698 aaKnown RBP12.92□□□□□ -0.34
CHFR-223ENST00000544268 ZNF845Q96IR2 970 aaPredicted RBP12.92□□□□□ -0.34
CHFR-223ENST00000544268 FAAP24Q9BTP7 215 aa12.92□□□□□ -0.34
CHFR-223ENST00000544268 PARP12Q9H0J9 701 aaKnown RBP12.92□□□□□ -0.34
CHFR-223ENST00000544268 GSKIPQ9P0R6 139 aa12.92□□□□□ -0.34
CHFR-223ENST00000544268 SH3BGRL2Q9UJC5 107 aa12.92□□□□□ -0.34
CHFR-223ENST00000544268 PUS1Q9Y606 427 aaKnown RBP eCLIP12.92□□□□□ -0.34
CHFR-223ENST00000544268 DNPH1O43598 174 aa12.91□□□□□ -0.34
CHFR-223ENST00000544268 VAMP5O95183 116 aa12.91□□□□□ -0.34
CHFR-223ENST00000544268 SNRPCP09234 159 aaKnown RBP12.91□□□□□ -0.34
CHFR-223ENST00000544268 OR13C7P0DN81 318 aa12.91□□□□□ -0.34
CHFR-223ENST00000544268 RPL12P30050 165 aaKnown RBP12.91□□□□□ -0.34
CHFR-223ENST00000544268 OR3A2P47893 321 aa12.91□□□□□ -0.34
CHFR-223ENST00000544268 ZNF616Q08AN1 781 aa12.91□□□□□ -0.34
CHFR-223ENST00000544268 SOHLH1Q5JUK2 328 aa12.91□□□□□ -0.34
CHFR-223ENST00000544268 VAX1Q5SQQ9 334 aa12.91□□□□□ -0.34
CHFR-223ENST00000544268 RPUSD3Q6P087 351 aaKnown RBP12.91□□□□□ -0.34
CHFR-223ENST00000544268 URM1Q9BTM9 101 aaKnown RBP12.91□□□□□ -0.34
CHFR-223ENST00000544268 SCNM1Q9BWG6 230 aa12.91□□□□□ -0.34
CHFR-223ENST00000544268 METTL8Q9H825 291 aaKnown RBP12.91□□□□□ -0.34
CHFR-223ENST00000544268 LUZP4Q9P127 313 aa12.91□□□□□ -0.34
CHFR-223ENST00000544268 FBXL17Q9UF56 701 aa12.91□□□□□ -0.34
CHFR-223ENST00000544268 SHANK1Q9Y566 2161 aa12.91□□□□□ -0.34
CHFR-223ENST00000544268 A0A087WWC5 75 aa12.91□□□□□ -0.34
CHFR-223ENST00000544268 A0A1B0GW64 132 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms