RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 LOC107984156A0A0G2JMH3 177 aa13.6□□□□□ -0.23
CHD4-210ENST00000544040 CDIPTO14735 213 aa13.6□□□□□ -0.23
CHD4-210ENST00000544040 PSG2P11465 335 aa13.6□□□□□ -0.23
CHD4-210ENST00000544040 ABLIM2Q6H8Q1 611 aa13.6□□□□□ -0.23
CHD4-210ENST00000544040 ARL17AQ8IVW1 177 aa13.6□□□□□ -0.23
CHD4-210ENST00000544040 TDHQ8IZJ6 230 aa13.6□□□□□ -0.23
CHD4-210ENST00000544040 SNRNP40Q96DI7 357 aaKnown RBP13.6□□□□□ -0.23
CHD4-210ENST00000544040 A0A1W2PPE3 182 aa13.59□□□□□ -0.23
CHD4-210ENST00000544040 F2RL2O00254 374 aa13.59□□□□□ -0.23
CHD4-210ENST00000544040 KHDC3LQ587J8 217 aa13.59□□□□□ -0.23
CHD4-210ENST00000544040 SLC52A3Q9NQ40 469 aa13.59□□□□□ -0.23
CHD4-210ENST00000544040 ZNF71Q9NQZ8 489 aaPredicted RBP13.59□□□□□ -0.23
CHD4-210ENST00000544040 CLN8Q9UBY8 286 aa13.59□□□□□ -0.23
CHD4-210ENST00000544040 TRAV17A0A0B4J275 112 aa13.59□□□□□ -0.23
CHD4-210ENST00000544040 LINC01387J3KSC0 135 aa13.59□□□□□ -0.23
CHD4-210ENST00000544040 CELA2BP08218 269 aaPredicted RBP13.59□□□□□ -0.23
CHD4-210ENST00000544040 OR8I2Q8N0Y5 310 aa13.59□□□□□ -0.23
CHD4-210ENST00000544040 RHOVQ96L33 236 aa13.59□□□□□ -0.23
CHD4-210ENST00000544040 SPANXN1Q5VSR9 72 aa13.59□□□□□ -0.23
CHD4-210ENST00000544040 PWWP2BQ6NUJ5 590 aa13.59□□□□□ -0.23
CHD4-210ENST00000544040 GBGT1Q8N5D6 347 aa13.59□□□□□ -0.23
CHD4-210ENST00000544040 VSTM2LQ96N03 204 aa13.59□□□□□ -0.23
CHD4-210ENST00000544040 M0R296 226 aa13.59□□□□□ -0.23
CHD4-210ENST00000544040 SMAD4Q13485 552 aaKnown RBP13.59□□□□□ -0.23
CHD4-210ENST00000544040 KIAA0040Q15053 153 aa13.59□□□□□ -0.23
CHD4-210ENST00000544040 TMUB1Q9BVT8 246 aa13.59□□□□□ -0.23
CHD4-210ENST00000544040 C1QL3Q5VWW1 255 aa13.59□□□□□ -0.23
CHD4-210ENST00000544040 DMKNQ6E0U4 476 aaPredicted RBP13.59□□□□□ -0.23
CHD4-210ENST00000544040 PERPQ96FX8 193 aa13.59□□□□□ -0.23
CHD4-210ENST00000544040 ZFP30Q9Y2G7 519 aa13.59□□□□□ -0.23
CHD4-210ENST00000544040 UBE2V2Q15819 145 aa13.58□□□□□ -0.23
CHD4-210ENST00000544040 OR2I1PQ8NGU4 316 aa13.58□□□□□ -0.23
CHD4-210ENST00000544040 RSG1Q9BU20 258 aa13.58□□□□□ -0.23
CHD4-210ENST00000544040 MIXL1Q9H2W2 232 aa13.58□□□□□ -0.23
CHD4-210ENST00000544040 SLC25A42Q86VD7 318 aa13.58□□□□□ -0.24
CHD4-210ENST00000544040 FSCN3Q9NQT6 498 aa13.58□□□□□ -0.24
CHD4-210ENST00000544040 CA10Q9NS85 328 aa13.58□□□□□ -0.24
CHD4-210ENST00000544040 PITPNC1Q9UKF7 332 aa13.58□□□□□ -0.24
CHD4-210ENST00000544040 CXorf1O96002 111 aa13.58□□□□□ -0.24
CHD4-210ENST00000544040 PPYP01298 95 aa13.58□□□□□ -0.24
CHD4-210ENST00000544040 TMIGD3P0DMS9 266 aaPredicted RBP13.58□□□□□ -0.24
CHD4-210ENST00000544040 TMEM50BP56557 158 aa13.58□□□□□ -0.24
CHD4-210ENST00000544040 SCAND1P57086 179 aa13.58□□□□□ -0.24
CHD4-210ENST00000544040 MGAT2Q10469 447 aa13.58□□□□□ -0.24
CHD4-210ENST00000544040 DNLZQ5SXM8 178 aa13.58□□□□□ -0.24
CHD4-210ENST00000544040 BHLHA15Q7RTS1 189 aaPredicted RBP13.58□□□□□ -0.24
CHD4-210ENST00000544040 PGA4P0DJD7 388 aa13.58□□□□□ -0.24
CHD4-210ENST00000544040 PGA5P0DJD9 388 aa13.58□□□□□ -0.24
CHD4-210ENST00000544040 REG1BP48304 166 aa13.58□□□□□ -0.24
CHD4-210ENST00000544040 ECSCRQ19T08 205 aa13.58□□□□□ -0.24
CHD4-210ENST00000544040 SPATA45Q537H7 98 aa13.58□□□□□ -0.24
CHD4-210ENST00000544040 MRPL30Q8TCC3 161 aaKnown RBP13.58□□□□□ -0.24
CHD4-210ENST00000544040 SKP2Q13309 424 aa13.58□□□□□ -0.24
CHD4-210ENST00000544040 DEGS2Q6QHC5 323 aa13.58□□□□□ -0.24
CHD4-210ENST00000544040 WDFY1Q8IWB7 410 aa13.58□□□□□ -0.24
CHD4-210ENST00000544040 HDHD3Q9BSH5 251 aaPredicted RBP13.58□□□□□ -0.24
CHD4-210ENST00000544040 CD74P04233 296 aa13.57□□□□□ -0.24
CHD4-210ENST00000544040 ZNF343Q6P1L6 599 aa13.57□□□□□ -0.24
CHD4-210ENST00000544040 FAHD2BQ6P2I3 314 aaPredicted RBP13.57□□□□□ -0.24
CHD4-210ENST00000544040 Q8WTZ3 238 aa13.57□□□□□ -0.24
CHD4-210ENST00000544040 TINAGQ9UJW2 476 aa13.57□□□□□ -0.24
CHD4-210ENST00000544040 CTDSPLO15194 276 aa13.57□□□□□ -0.24
CHD4-210ENST00000544040 SIRT7Q9NRC8 400 aa13.57□□□□□ -0.24
CHD4-210ENST00000544040 SIGLEC1Q9BZZ2 1709 aa13.57□□□□□ -0.24
CHD4-210ENST00000544040 OTX1P32242 354 aaPredicted RBP13.57□□□□□ -0.24
CHD4-210ENST00000544040 UBTD1Q9HAC8 227 aa13.57□□□□□ -0.24
CHD4-210ENST00000544040 HIST1H1BP16401 226 aaKnown RBP13.57□□□□□ -0.24
CHD4-210ENST00000544040 OR8B3Q8NGG8 313 aa13.57□□□□□ -0.24
CHD4-210ENST00000544040 CHAC2Q8WUX2 184 aa13.57□□□□□ -0.24
CHD4-210ENST00000544040 OR8B2Q96RD0 313 aa13.57□□□□□ -0.24
CHD4-210ENST00000544040 MIEN1Q9BRT3 115 aa13.57□□□□□ -0.24
CHD4-210ENST00000544040 RAB1BQ9H0U4 201 aa13.57□□□□□ -0.24
CHD4-210ENST00000544040 ZFP64Q9NPA5 681 aa13.57□□□□□ -0.24
CHD4-210ENST00000544040 OPN4Q9UHM6 478 aa13.57□□□□□ -0.24
CHD4-210ENST00000544040 MRGPRGQ86SM5 289 aa13.56□□□□□ -0.24
CHD4-210ENST00000544040 CARFQ8N187 725 aa13.56□□□□□ -0.24
CHD4-210ENST00000544040 VSTM2AQ8TAG5 236 aa13.56□□□□□ -0.24
CHD4-210ENST00000544040 RND1Q92730 232 aa13.56□□□□□ -0.24
CHD4-210ENST00000544040 CRISPLD2Q9H0B8 497 aa13.56□□□□□ -0.24
CHD4-210ENST00000544040 TRAV38-1A0A0B4J264 116 aa13.56□□□□□ -0.24
CHD4-210ENST00000544040 HIST1H1EP10412 219 aaKnown RBP13.56□□□□□ -0.24
CHD4-210ENST00000544040 STPG2Q8N412 459 aa13.56□□□□□ -0.24
CHD4-210ENST00000544040 HSPB9Q9BQS6 159 aa13.56□□□□□ -0.24
CHD4-210ENST00000544040 RBM38Q9H0Z9 239 aaKnown RBP13.56□□□□□ -0.24
CHD4-210ENST00000544040 IGKV3D-15A0A087WSY6 115 aa13.56□□□□□ -0.24
CHD4-210ENST00000544040 IGKV3-15P01624 115 aa13.56□□□□□ -0.24
CHD4-210ENST00000544040 SOX8P57073 446 aa13.56□□□□□ -0.24
CHD4-210ENST00000544040 OR4D11Q8NGI4 311 aa13.56□□□□□ -0.24
CHD4-210ENST00000544040 ADTRPQ96IZ2 230 aa13.56□□□□□ -0.24
CHD4-210ENST00000544040 SLC25A33Q9BSK2 321 aa13.56□□□□□ -0.24
CHD4-210ENST00000544040 PLA2G2FQ9BZM2 168 aa13.56□□□□□ -0.24
CHD4-210ENST00000544040 SIAH2O43255 324 aa13.56□□□□□ -0.24
CHD4-210ENST00000544040 RELBQ01201 579 aa13.56□□□□□ -0.24
CHD4-210ENST00000544040 COL5A1-AS1Q5SY13 56 aa13.56□□□□□ -0.24
CHD4-210ENST00000544040 HARBI1Q96MB7 349 aa13.56□□□□□ -0.24
CHD4-210ENST00000544040 GAGE10A6NGK3 116 aa13.56□□□□□ -0.24
CHD4-210ENST00000544040 PLP1P60201 277 aa13.56□□□□□ -0.24
CHD4-210ENST00000544040 SPEM2Q0P670 501 aa13.56□□□□□ -0.24
CHD4-210ENST00000544040 MRPL13Q9BYD1 178 aaKnown RBP13.56□□□□□ -0.24
CHD4-210ENST00000544040 PIPOXQ9P0Z9 390 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms