RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 FAAP24Q9BTP7 215 aa11.2□□□□□ -0.62
SP140-213ENST00000543928 ATG5Q9H1Y0 275 aa11.2□□□□□ -0.62
SP140-213ENST00000543928 LINC00312Q9Y6C7 94 aa11.2□□□□□ -0.62
SP140-213ENST00000543928 RAB27BO00194 218 aa11.19□□□□□ -0.62
SP140-213ENST00000543928 ZNF728P0DKX0 622 aa11.19□□□□□ -0.62
SP140-213ENST00000543928 DLX6P56179 175 aa11.19□□□□□ -0.62
SP140-213ENST00000543928 TMEM50BP56557 158 aa11.19□□□□□ -0.62
SP140-213ENST00000543928 PLAC9Q5JTB6 97 aa11.19□□□□□ -0.62
SP140-213ENST00000543928 ZNF497Q6ZNH5 498 aa11.19□□□□□ -0.62
SP140-213ENST00000543928 C1orf122Q6ZSJ8 110 aa11.19□□□□□ -0.62
SP140-213ENST00000543928 Q6ZTK2 550 aa11.19□□□□□ -0.62
SP140-213ENST00000543928 VMO1Q7Z5L0 202 aa11.19□□□□□ -0.62
SP140-213ENST00000543928 LURAP1LQ8IV03 231 aa11.19□□□□□ -0.62
SP140-213ENST00000543928 OR10R2Q8NGX6 335 aa11.19□□□□□ -0.62
SP140-213ENST00000543928 UPRTQ96BW1 309 aa11.19□□□□□ -0.62
SP140-213ENST00000543928 KCTD12Q96CX2 325 aaKnown RBP11.19□□□□□ -0.62
SP140-213ENST00000543928 SLC25A38Q96DW6 304 aa11.19□□□□□ -0.62
SP140-213ENST00000543928 ARHGAP5-AS1Q96IT6 56 aa11.19□□□□□ -0.62
SP140-213ENST00000543928 BEX2Q9BXY8 128 aa11.19□□□□□ -0.62
SP140-213ENST00000543928 PECRQ9BY49 303 aa11.19□□□□□ -0.62
SP140-213ENST00000543928 RBM38Q9H0Z9 239 aaKnown RBP11.19□□□□□ -0.62
SP140-213ENST00000543928 NCOR1P1Q9H4R4 102 aa11.19□□□□□ -0.62
SP140-213ENST00000543928 SIRT7Q9NRC8 400 aa11.19□□□□□ -0.62
SP140-213ENST00000543928 RHBDL2Q9NX52 303 aa11.19□□□□□ -0.62
SP140-213ENST00000543928 OR6C3Q9NZP0 311 aa11.19□□□□□ -0.62
SP140-213ENST00000543928 CDC42EP3Q9UKI2 254 aa11.19□□□□□ -0.62
SP140-213ENST00000543928 HSF4Q9ULV5 492 aa11.19□□□□□ -0.62
SP140-213ENST00000543928 SPATA2Q9UM82 520 aa11.19□□□□□ -0.62
SP140-213ENST00000543928 UBE2J1Q9Y385 318 aaPredicted RBP11.19□□□□□ -0.62
SP140-213ENST00000543928 TRAV39A0A0B4J263 110 aa11.18□□□□□ -0.62
SP140-213ENST00000543928 C17orf98A8MV24 154 aa11.18□□□□□ -0.62
SP140-213ENST00000543928 CA11O75493 328 aa11.18□□□□□ -0.62
SP140-213ENST00000543928 MT-ND4P03905 459 aa11.18□□□□□ -0.62
SP140-213ENST00000543928 SRP14P37108 136 aaKnown RBP11.18□□□□□ -0.62
SP140-213ENST00000543928 GLP1RP43220 463 aa11.18□□□□□ -0.62
SP140-213ENST00000543928 DLX1P56177 255 aa11.18□□□□□ -0.62
SP140-213ENST00000543928 ERVFRD-1P60508 538 aa11.18□□□□□ -0.62
SP140-213ENST00000543928 PRB3Q04118 309 aaPredicted RBP11.18□□□□□ -0.62
SP140-213ENST00000543928 C11orf42Q8N5U0 333 aa11.18□□□□□ -0.62
SP140-213ENST00000543928 TEX29Q8N6K0 151 aa11.18□□□□□ -0.62
SP140-213ENST00000543928 ZNF565Q8N9K5 539 aa11.18□□□□□ -0.62
SP140-213ENST00000543928 OR13A1Q8NGR1 328 aa11.18□□□□□ -0.62
SP140-213ENST00000543928 NANPQ8TBE9 248 aa11.18□□□□□ -0.62
SP140-213ENST00000543928 CCDC107Q8WV48 283 aa11.18□□□□□ -0.62
SP140-213ENST00000543928 CORO2AQ92828 525 aa11.18□□□□□ -0.62
SP140-213ENST00000543928 RAB3CQ96E17 227 aa11.18□□□□□ -0.62
SP140-213ENST00000543928 METTL8Q9H825 291 aaKnown RBP11.18□□□□□ -0.62
SP140-213ENST00000543928 NAV3Q8IVL0 2385 aa11.18□□□□□ -0.62
SP140-213ENST00000543928 A0A075B6Q4 140 aa11.17□□□□□ -0.62
SP140-213ENST00000543928 IGHV3OR16-10A0A075B7F0 116 aa11.17□□□□□ -0.62
SP140-213ENST00000543928 TRAV40A0A0B4J280 105 aa11.17□□□□□ -0.62
SP140-213ENST00000543928 hCG_1809904A0A1W2PP81 198 aa11.17□□□□□ -0.62
SP140-213ENST00000543928 A0A1W2PPE2 198 aa11.17□□□□□ -0.62
SP140-213ENST00000543928 A0A1W2PR64 198 aa11.17□□□□□ -0.62
SP140-213ENST00000543928 A0A1W2PRV1 198 aa11.17□□□□□ -0.62
SP140-213ENST00000543928 ZNF729A6NN14 1252 aaPredicted RBP11.17□□□□□ -0.62
SP140-213ENST00000543928 FSHBP01225 129 aa11.17□□□□□ -0.62
SP140-213ENST00000543928 ZNF182P17025 639 aaPredicted RBP11.17□□□□□ -0.62
SP140-213ENST00000543928 PRTN3P24158 256 aa11.17□□□□□ -0.62
SP140-213ENST00000543928 CHRFAM7AQ494W8 412 aa11.17□□□□□ -0.62
SP140-213ENST00000543928 KLF17Q5JT82 389 aaPredicted RBP11.17□□□□□ -0.62
SP140-213ENST00000543928 GAPTQ8N292 157 aa11.17□□□□□ -0.62
SP140-213ENST00000543928 SAMD12Q8N8I0 201 aa11.17□□□□□ -0.62
SP140-213ENST00000543928 OR4K15Q8NH41 348 aa11.17□□□□□ -0.62
SP140-213ENST00000543928 MRPL30Q8TCC3 161 aaKnown RBP11.17□□□□□ -0.62
SP140-213ENST00000543928 DYNC2LI1Q8TCX1 351 aa11.17□□□□□ -0.62
SP140-213ENST00000543928 MRGPRDQ8TDS7 321 aa11.17□□□□□ -0.62
SP140-213ENST00000543928 ACOT12Q8WYK0 555 aa11.17□□□□□ -0.62
SP140-213ENST00000543928 AP3S1Q92572 193 aa11.17□□□□□ -0.62
SP140-213ENST00000543928 KRTAP3-3Q9BYR6 98 aa11.17□□□□□ -0.62
SP140-213ENST00000543928 KRTAP3-2Q9BYR7 98 aa11.17□□□□□ -0.62
SP140-213ENST00000543928 GAL3ST2Q9H3Q3 398 aa11.17□□□□□ -0.62
SP140-213ENST00000543928 TAS2R3Q9NYW6 316 aa11.17□□□□□ -0.62
SP140-213ENST00000543928 COMMD3Q9UBI1 195 aa11.17□□□□□ -0.62
SP140-213ENST00000543928 RSL24D1Q9UHA3 163 aaKnown RBP11.17□□□□□ -0.62
SP140-213ENST00000543928 AK3Q9UIJ7 227 aa11.17□□□□□ -0.62
SP140-213ENST00000543928 CRLF1O75462 422 aa11.16□□□□□ -0.62
SP140-213ENST00000543928 CLPXO76031 633 aa11.16□□□□□ -0.62
SP140-213ENST00000543928 SCGNO76038 276 aa11.16□□□□□ -0.62
SP140-213ENST00000543928 RBP4P02753 201 aa11.16□□□□□ -0.62
SP140-213ENST00000543928 CGB3P0DN86 165 aa11.16□□□□□ -0.62
SP140-213ENST00000543928 CGB7P0DN87 165 aa11.16□□□□□ -0.62
SP140-213ENST00000543928 IGHV4-38-2P0DP08 117 aa11.16□□□□□ -0.62
SP140-213ENST00000543928 HIST1H1DP16402 221 aaKnown RBP11.16□□□□□ -0.62
SP140-213ENST00000543928 GNB3P16520 340 aa11.16□□□□□ -0.62
SP140-213ENST00000543928 SOX6P35712 828 aa11.16□□□□□ -0.62
SP140-213ENST00000543928 DYNC1I2Q13409 638 aaKnown RBP11.16□□□□□ -0.62
SP140-213ENST00000543928 C17orf58Q2M2W7 97 aa11.16□□□□□ -0.62
SP140-213ENST00000543928 UBE2NLQ5JXB2 153 aa11.16□□□□□ -0.62
SP140-213ENST00000543928 OLFML2AQ68BL7 652 aa11.16□□□□□ -0.62
SP140-213ENST00000543928 ZNF782Q6ZMW2 699 aaPredicted RBP11.16□□□□□ -0.62
SP140-213ENST00000543928 PDZD9Q8IXQ8 264 aa11.16□□□□□ -0.62
SP140-213ENST00000543928 LHX4Q969G2 390 aa11.16□□□□□ -0.62
SP140-213ENST00000543928 PHF21AQ96BD5 680 aa11.16□□□□□ -0.62
SP140-213ENST00000543928 UNKLQ9H9P5 680 aaKnown RBP11.16□□□□□ -0.62
SP140-213ENST00000543928 ZMAT3Q9HA38 289 aaKnown RBP11.16□□□□□ -0.62
SP140-213ENST00000543928 CALYQ9NYX4 217 aa11.16□□□□□ -0.62
SP140-213ENST00000543928 TRAPPC2LQ9UL33 140 aa11.16□□□□□ -0.62
SP140-213ENST00000543928 KCNK7Q9Y2U2 307 aa11.16□□□□□ -0.62
SP140-213ENST00000543928 CENPVL3A0A0U1RRI6 287 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms