RNA–Protein interactions for RNA: ENST00000543658.5

DDB1-223, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-223ENST00000543658 ACTG1P63261 375 aa9.86□□□□□ -0.83
DDB1-223ENST00000543658 LCN2P80188 198 aa9.86□□□□□ -0.83
DDB1-223ENST00000543658 PAX5Q02548 391 aa9.86□□□□□ -0.83
DDB1-223ENST00000543658 MEF2CQ06413 473 aaPredicted RBP9.86□□□□□ -0.83
DDB1-223ENST00000543658 ZNF846Q147U1 533 aa9.86□□□□□ -0.83
DDB1-223ENST00000543658 BTNL3Q6UXE8 466 aa9.86□□□□□ -0.83
DDB1-223ENST00000543658 ZNF841Q6ZN19 808 aa9.86□□□□□ -0.83
DDB1-223ENST00000543658 RTN4RL2Q86UN3 420 aa9.86□□□□□ -0.83
DDB1-223ENST00000543658 ZNF565Q8N9K5 539 aa9.86□□□□□ -0.83
DDB1-223ENST00000543658 WFDC11Q8NEX6 87 aa9.86□□□□□ -0.83
DDB1-223ENST00000543658 CCDC107Q8WV48 283 aa9.86□□□□□ -0.83
DDB1-223ENST00000543658 COQ2Q96H96 371 aa9.86□□□□□ -0.83
DDB1-223ENST00000543658 HDHD3Q9BSH5 251 aaPredicted RBP9.86□□□□□ -0.83
DDB1-223ENST00000543658 DCTN5Q9BTE1 182 aa9.86□□□□□ -0.83
DDB1-223ENST00000543658 GAL3ST2Q9H3Q3 398 aa9.86□□□□□ -0.83
DDB1-223ENST00000543658 ZNF286AQ9HBT8 521 aa9.86□□□□□ -0.83
DDB1-223ENST00000543658 PPIAL4CA0A0B4J2A2 164 aa9.85□□□□□ -0.83
DDB1-223ENST00000543658 KIR2DS1A0A191URI9 304 aa9.85□□□□□ -0.83
DDB1-223ENST00000543658 hCG_1809904A0A1W2PP81 198 aa9.85□□□□□ -0.83
DDB1-223ENST00000543658 A0A1W2PPE2 198 aa9.85□□□□□ -0.83
DDB1-223ENST00000543658 A0A1W2PR64 198 aa9.85□□□□□ -0.83
DDB1-223ENST00000543658 A0A1W2PRV1 198 aa9.85□□□□□ -0.83
DDB1-223ENST00000543658 MEIS3P1A6NDR6 274 aa9.85□□□□□ -0.83
DDB1-223ENST00000543658 POM121CA8CG34 1229 aa9.85□□□□□ -0.83
DDB1-223ENST00000543658 A8MXK9 166 aa9.85□□□□□ -0.83
DDB1-223ENST00000543658 GABARAPH6UMI1 98 aa9.85□□□□□ -0.83
DDB1-223ENST00000543658 CTDSPLO15194 276 aa9.85□□□□□ -0.83
DDB1-223ENST00000543658 HLA-DQB1P01920 261 aa9.85□□□□□ -0.83
DDB1-223ENST00000543658 LIPFP07098 398 aa9.85□□□□□ -0.83
DDB1-223ENST00000543658 MELTFP08582 738 aa9.85□□□□□ -0.83
DDB1-223ENST00000543658 FCGR3AP08637 254 aa9.85□□□□□ -0.83
DDB1-223ENST00000543658 PPIAL4GP0DN37 164 aa9.85□□□□□ -0.83
DDB1-223ENST00000543658 PTHLHP12272 177 aa9.85□□□□□ -0.83
DDB1-223ENST00000543658 IL2RGP31785 369 aa9.85□□□□□ -0.83
DDB1-223ENST00000543658 KIR2DS4P43632 304 aa9.85□□□□□ -0.83
DDB1-223ENST00000543658 KIR2DS1Q14954 304 aa9.85□□□□□ -0.83
DDB1-223ENST00000543658 KRTAP1-3Q8IUG1 177 aa9.85□□□□□ -0.83
DDB1-223ENST00000543658 FGFRL1Q8N441 504 aa9.85□□□□□ -0.83
DDB1-223ENST00000543658 MRPL30Q8TCC3 161 aaKnown RBP9.85□□□□□ -0.83
DDB1-223ENST00000543658 MRGPRDQ8TDS7 321 aa9.85□□□□□ -0.83
DDB1-223ENST00000543658 GCDHQ92947 438 aaPredicted RBP9.85□□□□□ -0.83
DDB1-223ENST00000543658 NCOR1P1Q9H4R4 102 aa9.85□□□□□ -0.83
DDB1-223ENST00000543658 OCEL1Q9H607 264 aa9.85□□□□□ -0.83
DDB1-223ENST00000543658 LPAR2Q9HBW0 351 aa9.85□□□□□ -0.83
DDB1-223ENST00000543658 RPUSD1Q9UJJ7 312 aaKnown RBP9.85□□□□□ -0.83
DDB1-223ENST00000543658 ELF5Q9UKW6 265 aaPredicted RBP9.85□□□□□ -0.83
DDB1-223ENST00000543658 KCNK7Q9Y2U2 307 aa9.85□□□□□ -0.83
DDB1-223ENST00000543658 UBE2J1Q9Y385 318 aaPredicted RBP9.85□□□□□ -0.83
DDB1-223ENST00000543658 LINC00312Q9Y6C7 94 aa9.85□□□□□ -0.83
DDB1-223ENST00000543658 V9GYH0 126 aa9.85□□□□□ -0.83
DDB1-223ENST00000543658 MALRD1Q5VYJ5 2156 aa9.84□□□□□ -0.83
DDB1-223ENST00000543658 TRBV6-6A0A0A6YYG2 114 aa9.84□□□□□ -0.83
DDB1-223ENST00000543658 ZNF729A6NN14 1252 aaPredicted RBP9.84□□□□□ -0.83
DDB1-223ENST00000543658 B4DSR2 109 aa9.84□□□□□ -0.83
DDB1-223ENST00000543658 FAM157AC9JC47 383 aa9.84□□□□□ -0.83
DDB1-223ENST00000543658 SMAD7O15105 426 aaKnown RBP9.84□□□□□ -0.83
DDB1-223ENST00000543658 SPINT2O43291 252 aa9.84□□□□□ -0.83
DDB1-223ENST00000543658 RBBP9O75884 186 aa9.84□□□□□ -0.83
DDB1-223ENST00000543658 NAPSAO96009 420 aa9.84□□□□□ -0.83
DDB1-223ENST00000543658 MT-ND4P03905 459 aa9.84□□□□□ -0.83
DDB1-223ENST00000543658 RCVRNP35243 200 aa9.84□□□□□ -0.83
DDB1-223ENST00000543658 GZMKP49863 264 aa9.84□□□□□ -0.83
DDB1-223ENST00000543658 ARPC4P59998 168 aa9.84□□□□□ -0.83
DDB1-223ENST00000543658 HLA-DRB3P79483 266 aa9.84□□□□□ -0.83
DDB1-223ENST00000543658 GUCA2AQ02747 115 aa9.84□□□□□ -0.83
DDB1-223ENST00000543658 TRIQKQ629K1 86 aa9.84□□□□□ -0.83
DDB1-223ENST00000543658 Q8N402 240 aa9.84□□□□□ -0.83
DDB1-223ENST00000543658 PRR18Q8N4B5 295 aa9.84□□□□□ -0.83
DDB1-223ENST00000543658 GDPD1Q8N9F7 314 aa9.84□□□□□ -0.83
DDB1-223ENST00000543658 LINC01356Q8N9X3 169 aa9.84□□□□□ -0.83
DDB1-223ENST00000543658 SMIM4Q8WVI0 70 aa9.84□□□□□ -0.83
DDB1-223ENST00000543658 ZNF714Q96N38 554 aa9.84□□□□□ -0.83
DDB1-223ENST00000543658 ABHD1Q96SE0 405 aa9.84□□□□□ -0.83
DDB1-223ENST00000543658 ST6GALNAC5Q9BVH7 336 aa9.84□□□□□ -0.83
DDB1-223ENST00000543658 AKIP1Q9NQ31 210 aa9.84□□□□□ -0.83
DDB1-223ENST00000543658 C19orf12Q9NSK7 152 aa9.84□□□□□ -0.83
DDB1-223ENST00000543658 TAS2R3Q9NYW6 316 aa9.84□□□□□ -0.83
DDB1-223ENST00000543658 ONECUT1Q9UBC0 465 aa9.84□□□□□ -0.83
DDB1-223ENST00000543658 ARHGAP32A7KAX9 2087 aa9.84□□□□□ -0.83
DDB1-223ENST00000543658 IGHV2-70DA0A0C4DH43 119 aa9.83□□□□□ -0.84
DDB1-223ENST00000543658 MEIOCA2RUB1 952 aa9.83□□□□□ -0.84
DDB1-223ENST00000543658 MSMBP08118 114 aa9.83□□□□□ -0.84
DDB1-223ENST00000543658 CSF1P09603 554 aa9.83□□□□□ -0.84
DDB1-223ENST00000543658 GSTT2BP0CG30 244 aa9.83□□□□□ -0.84
DDB1-223ENST00000543658 GZMHP20718 246 aa9.83□□□□□ -0.84
DDB1-223ENST00000543658 AP3S2P59780 193 aa9.83□□□□□ -0.84
DDB1-223ENST00000543658 DGCR2P98153 550 aa9.83□□□□□ -0.84
DDB1-223ENST00000543658 SSBP1Q04837 148 aaKnown RBP9.83□□□□□ -0.84
DDB1-223ENST00000543658 LSAMPQ13449 338 aa9.83□□□□□ -0.84
DDB1-223ENST00000543658 ZNF79Q15937 498 aa9.83□□□□□ -0.84
DDB1-223ENST00000543658 GLCCI1Q86VQ1 547 aa9.83□□□□□ -0.84
DDB1-223ENST00000543658 MAPK1IP1LQ8NDC0 245 aa9.83□□□□□ -0.84
DDB1-223ENST00000543658 BEST4Q8NFU0 473 aa9.83□□□□□ -0.84
DDB1-223ENST00000543658 OR13A1Q8NGR1 328 aa9.83□□□□□ -0.84
DDB1-223ENST00000543658 OR52I2Q8NH67 350 aa9.83□□□□□ -0.84
DDB1-223ENST00000543658 C8orf46Q8TAG6 207 aa9.83□□□□□ -0.84
DDB1-223ENST00000543658 GPX8Q8TED1 209 aa9.83□□□□□ -0.84
DDB1-223ENST00000543658 MAFIPQ8WZ33 124 aa9.83□□□□□ -0.84
DDB1-223ENST00000543658 ARL11Q969Q4 196 aa9.83□□□□□ -0.84
DDB1-223ENST00000543658 SRRQ9GZT4 340 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms