RNA–Protein interactions for RNA: ENST00000543555.5

MSH2-206, Transcript of mutS homolog 2, humanhuman

TSL 2 BASIC

Gene MSH2, Length 3,024 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-206ENST00000543555 CDH20Q9HBT6 801 aa11.85□□□□□ -0.51
MSH2-206ENST00000543555 NUDT19A8MXV4 375 aa11.85□□□□□ -0.51
MSH2-206ENST00000543555 LYZL6O75951 148 aa11.85□□□□□ -0.51
MSH2-206ENST00000543555 JTBO76095 146 aa11.85□□□□□ -0.51
MSH2-206ENST00000543555 PPP1CBP62140 327 aa11.85□□□□□ -0.51
MSH2-206ENST00000543555 SPIN3Q5JUX0 258 aa11.85□□□□□ -0.51
MSH2-206ENST00000543555 ATRAIDQ6UW56 229 aa11.85□□□□□ -0.51
MSH2-206ENST00000543555 ZNF818PQ6ZRF7 136 aa11.85□□□□□ -0.51
MSH2-206ENST00000543555 RDH5Q92781 318 aa11.85□□□□□ -0.51
MSH2-206ENST00000543555 RTL8AQ9BWD3 113 aa11.85□□□□□ -0.51
MSH2-206ENST00000543555 SMIM3Q9BZL3 60 aa11.85□□□□□ -0.51
MSH2-206ENST00000543555 MMP26Q9NRE1 261 aa11.85□□□□□ -0.51
MSH2-206ENST00000543555 SHANK1Q9Y566 2161 aa11.85□□□□□ -0.51
MSH2-206ENST00000543555 PTPRQQ9UMZ3 2332 aa11.85□□□□□ -0.51
MSH2-206ENST00000543555 TRBV6-6A0A0A6YYG2 114 aa11.84□□□□□ -0.51
MSH2-206ENST00000543555 IGKV1D-13A0A0B4J2D9 117 aa11.84□□□□□ -0.51
MSH2-206ENST00000543555 LOC105371267A0A1B0GV96 52 aa11.84□□□□□ -0.51
MSH2-206ENST00000543555 C3orf80F5H4A9 247 aa11.84□□□□□ -0.51
MSH2-206ENST00000543555 GPR31O00270 319 aa11.84□□□□□ -0.51
MSH2-206ENST00000543555 GLAP06280 429 aa11.84□□□□□ -0.51
MSH2-206ENST00000543555 IGKV1-13P0DP09 117 aa11.84□□□□□ -0.51
MSH2-206ENST00000543555 C20orf204Q6ZNR8 217 aa11.84□□□□□ -0.51
MSH2-206ENST00000543555 ERGIC1Q969X5 290 aa11.84□□□□□ -0.51
MSH2-206ENST00000543555 SAT2Q96F10 170 aaPredicted RBP11.84□□□□□ -0.51
MSH2-206ENST00000543555 SMIM8Q96KF7 97 aa11.84□□□□□ -0.51
MSH2-206ENST00000543555 OR2J1Q9GZK6 312 aa11.84□□□□□ -0.51
MSH2-206ENST00000543555 IFT22Q9H7X7 185 aa11.84□□□□□ -0.51
MSH2-206ENST00000543555 SPTA1P02549 2419 aa11.84□□□□□ -0.51
MSH2-206ENST00000543555 ST8SIA3O43173 380 aa11.84□□□□□ -0.51
MSH2-206ENST00000543555 WISP2O76076 250 aa11.84□□□□□ -0.51
MSH2-206ENST00000543555 GUSBP1Q15486 140 aa11.84□□□□□ -0.51
MSH2-206ENST00000543555 GABRA6Q16445 453 aa11.84□□□□□ -0.51
MSH2-206ENST00000543555 DEFB109BQ30KR1 87 aa11.84□□□□□ -0.51
MSH2-206ENST00000543555 WDR86Q86TI4 376 aa11.84□□□□□ -0.51
MSH2-206ENST00000543555 GAPTQ8N292 157 aa11.84□□□□□ -0.51
MSH2-206ENST00000543555 OR4D5Q8NGN0 318 aa11.84□□□□□ -0.51
MSH2-206ENST00000543555 LRRC46Q96FV0 321 aa11.84□□□□□ -0.51
MSH2-206ENST00000543555 TMEM56Q96MV1 263 aa11.84□□□□□ -0.51
MSH2-206ENST00000543555 USB1Q9BQ65 265 aaKnown RBP11.84□□□□□ -0.51
MSH2-206ENST00000543555 TMEM56-RWDD3S4R434 201 aa11.84□□□□□ -0.51
MSH2-206ENST00000543555 TMEM218A2RU14 115 aa11.84□□□□□ -0.51
MSH2-206ENST00000543555 DEFA5Q01523 94 aa11.84□□□□□ -0.51
MSH2-206ENST00000543555 TAGLNQ01995 201 aaKnown RBP11.84□□□□□ -0.51
MSH2-206ENST00000543555 ZNF880Q6PDB4 577 aa11.84□□□□□ -0.51
MSH2-206ENST00000543555 Q6ZT83 130 aa11.84□□□□□ -0.51
MSH2-206ENST00000543555 RHOFQ9HBH0 211 aa11.84□□□□□ -0.51
MSH2-206ENST00000543555 UBE2J1Q9Y385 318 aaPredicted RBP11.84□□□□□ -0.51
MSH2-206ENST00000543555 LRP5LA4QPB2 252 aa11.83□□□□□ -0.52
MSH2-206ENST00000543555 GPR137BO60478 399 aa11.83□□□□□ -0.52
MSH2-206ENST00000543555 SULT1A2P50226 295 aa11.83□□□□□ -0.52
MSH2-206ENST00000543555 AKR1C2P52895 323 aa11.83□□□□□ -0.52
MSH2-206ENST00000543555 ERVS71-1P61550 626 aa11.83□□□□□ -0.52
MSH2-206ENST00000543555 AKR1C1Q04828 323 aa11.83□□□□□ -0.52
MSH2-206ENST00000543555 FAM76BQ5HYJ3 339 aa11.83□□□□□ -0.52
MSH2-206ENST00000543555 PXDC1Q5TGL8 231 aa11.83□□□□□ -0.52
MSH2-206ENST00000543555 PCSK4Q6UW60 755 aa11.83□□□□□ -0.52
MSH2-206ENST00000543555 IL34Q6ZMJ4 242 aa11.83□□□□□ -0.52
MSH2-206ENST00000543555 ZDHHC8Q9ULC8 765 aa11.83□□□□□ -0.52
MSH2-206ENST00000543555 TRAV17A0A0B4J275 112 aa11.83□□□□□ -0.52
MSH2-206ENST00000543555 AQP7O14520 342 aa11.83□□□□□ -0.52
MSH2-206ENST00000543555 ABCD4O14678 606 aa11.83□□□□□ -0.52
MSH2-206ENST00000543555 CDS2O95674 445 aa11.83□□□□□ -0.52
MSH2-206ENST00000543555 ZNF44P15621 663 aa11.83□□□□□ -0.52
MSH2-206ENST00000543555 P2RY1P47900 373 aa11.83□□□□□ -0.52
MSH2-206ENST00000543555 HLA-DRB3P79483 266 aa11.83□□□□□ -0.52
MSH2-206ENST00000543555 GPR157Q5UAW9 335 aa11.83□□□□□ -0.52
MSH2-206ENST00000543555 Q6P435 159 aa11.83□□□□□ -0.52
MSH2-206ENST00000543555 INO80CQ6PI98 192 aaPredicted RBP11.83□□□□□ -0.52
MSH2-206ENST00000543555 ZNF695Q8IW36 515 aa11.83□□□□□ -0.52
MSH2-206ENST00000543555 UBAC2Q8NBM4 344 aa11.83□□□□□ -0.52
MSH2-206ENST00000543555 OR4A4PQ8NGN8 299 aa11.83□□□□□ -0.52
MSH2-206ENST00000543555 BSCL2Q96G97 398 aaPredicted RBP11.83□□□□□ -0.52
MSH2-206ENST00000543555 CCL28Q9NRJ3 127 aa11.83□□□□□ -0.52
MSH2-206ENST00000543555 POMT1Q9Y6A1 747 aa11.83□□□□□ -0.52
MSH2-206ENST00000543555 MED12LQ86YW9 2145 aa11.83□□□□□ -0.52
MSH2-206ENST00000543555 NKX2-6A6NCS4 301 aa11.82□□□□□ -0.52
MSH2-206ENST00000543555 HSD17B6O14756 317 aa11.82□□□□□ -0.52
MSH2-206ENST00000543555 TSPAN4O14817 238 aa11.82□□□□□ -0.52
MSH2-206ENST00000543555 DEGS1O15121 323 aa11.82□□□□□ -0.52
MSH2-206ENST00000543555 FBXO24O75426 580 aa11.82□□□□□ -0.52
MSH2-206ENST00000543555 MED6O75586 246 aa11.82□□□□□ -0.52
MSH2-206ENST00000543555 ARHGDIBP52566 201 aa11.82□□□□□ -0.52
MSH2-206ENST00000543555 PJVKQ0ZLH3 352 aa11.82□□□□□ -0.52
MSH2-206ENST00000543555 CLEC9AQ6UXN8 241 aa11.82□□□□□ -0.52
MSH2-206ENST00000543555 DMBX1Q8NFW5 382 aa11.82□□□□□ -0.52
MSH2-206ENST00000543555 SLC25A40Q8TBP6 338 aa11.82□□□□□ -0.52
MSH2-206ENST00000543555 RCL1Q9Y2P8 373 aaKnown RBP11.82□□□□□ -0.52
MSH2-206ENST00000543555 DOCK7Q96N67 2140 aa11.82□□□□□ -0.52
MSH2-206ENST00000543555 LPAR6P43657 344 aa11.82□□□□□ -0.52
MSH2-206ENST00000543555 SRSF3P84103 164 aaKnown RBP11.82□□□□□ -0.52
MSH2-206ENST00000543555 ZNF273Q14593 569 aa11.82□□□□□ -0.52
MSH2-206ENST00000543555 SELENOHQ8IZQ5 122 aaKnown RBP11.82□□□□□ -0.52
MSH2-206ENST00000543555 CNEP1R1Q8N9A8 125 aa11.82□□□□□ -0.52
MSH2-206ENST00000543555 SCCPDHQ8NBX0 429 aa11.82□□□□□ -0.52
MSH2-206ENST00000543555 GPHA2Q96T91 129 aa11.82□□□□□ -0.52
MSH2-206ENST00000543555 ADAT1Q9BUB4 502 aaKnown RBP11.82□□□□□ -0.52
MSH2-206ENST00000543555 HRH4Q9H3N8 390 aa11.82□□□□□ -0.52
MSH2-206ENST00000543555 NBASA2RRP1 2371 aa11.82□□□□□ -0.52
MSH2-206ENST00000543555 RAC2P15153 192 aa11.81□□□□□ -0.52
MSH2-206ENST00000543555 ERVK11-1P61568 191 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms