RNA–Protein interactions for RNA: ENST00000543324.1

CIT-213, Transcript of citron rho-interacting serine/threonine kinase, human

TSL 3

Gene CIT, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIT-213	ENST00000543324	IGLV1-36	A0A0B4J1U3	117 aa		5.36	□□□□□ -1.55
CIT-213	ENST00000543324		A0A0B4J203	849 aa		5.36	□□□□□ -1.55
CIT-213	ENST00000543324	TRAV20	A0A0B4J274	112 aa		5.36	□□□□□ -1.55
CIT-213	ENST00000543324	PPIAL4C	A0A0B4J2A2	164 aa		5.36	□□□□□ -1.55
CIT-213	ENST00000543324	MEX3A	A1L020	520 aa	Known RBP	5.36	□□□□□ -1.55
CIT-213	ENST00000543324	C5orf49	A4QMS7	147 aa		5.36	□□□□□ -1.55
CIT-213	ENST00000543324	DNAJC9-AS1	A6NH13	148 aa		5.36	□□□□□ -1.55
CIT-213	ENST00000543324	FAM183A	A6NL82	134 aa		5.36	□□□□□ -1.55
CIT-213	ENST00000543324	ZNF729	A6NN14	1252 aa	Predicted RBP	5.36	□□□□□ -1.55
CIT-213	ENST00000543324	RIIAD1	A6NNX1	92 aa		5.36	□□□□□ -1.55
CIT-213	ENST00000543324	COLCA2	A8K830	154 aa		5.36	□□□□□ -1.55
CIT-213	ENST00000543324	C1orf196	B1AJZ1	125 aa		5.36	□□□□□ -1.55
CIT-213	ENST00000543324	PPIAL4D	F5H284	164 aa		5.36	□□□□□ -1.55
CIT-213	ENST00000543324		H7C1C5	153 aa		5.36	□□□□□ -1.55
CIT-213	ENST00000543324	DCTN6	O00399	190 aa		5.36	□□□□□ -1.55
CIT-213	ENST00000543324	MAGEB4	O15481	346 aa	Predicted RBP	5.36	□□□□□ -1.55
CIT-213	ENST00000543324	HTR3B	O95264	441 aa		5.36	□□□□□ -1.55
CIT-213	ENST00000543324	AVP	P01185	164 aa		5.36	□□□□□ -1.55
CIT-213	ENST00000543324	IFNG	P01579	166 aa		5.36	□□□□□ -1.55
CIT-213	ENST00000543324	PPIAL4F	P0DN26	164 aa		5.36	□□□□□ -1.55
CIT-213	ENST00000543324	ZNF3	P17036	446 aa		5.36	□□□□□ -1.55
CIT-213	ENST00000543324	RCC1	P18754	421 aa	Predicted RBP	5.36	□□□□□ -1.55
CIT-213	ENST00000543324	KITLG	P21583	273 aa		5.36	□□□□□ -1.55
CIT-213	ENST00000543324	TUBG1	P23258	451 aa		5.36	□□□□□ -1.55
CIT-213	ENST00000543324	CDK2	P24941	298 aa		5.36	□□□□□ -1.55
CIT-213	ENST00000543324	MPZ	P25189	248 aa		5.36	□□□□□ -1.55
CIT-213	ENST00000543324	BDKRB2	P30411	391 aa		5.36	□□□□□ -1.55
CIT-213	ENST00000543324	DCTD	P32321	178 aa		5.36	□□□□□ -1.55
CIT-213	ENST00000543324	PTGFR	P43088	359 aa		5.36	□□□□□ -1.55
CIT-213	ENST00000543324	SLC6A9	P48067	706 aa		5.36	□□□□□ -1.55
CIT-213	ENST00000543324	PCBD1	P61457	104 aa		5.36	□□□□□ -1.55
CIT-213	ENST00000543324	PPP1CB	P62140	327 aa		5.36	□□□□□ -1.55
CIT-213	ENST00000543324	LSM6	P62312	80 aa	Known RBP	5.36	□□□□□ -1.55
CIT-213	ENST00000543324	LCN6	P62502	163 aa		5.36	□□□□□ -1.55
CIT-213	ENST00000543324	BLOC1S1	P78537	153 aa		5.36	□□□□□ -1.55
CIT-213	ENST00000543324	CRMP1	Q14194	572 aa		5.36	□□□□□ -1.55
CIT-213	ENST00000543324	HABP2	Q14520	560 aa	Predicted RBP	5.36	□□□□□ -1.55
CIT-213	ENST00000543324	PEA15	Q15121	130 aa		5.36	□□□□□ -1.55
CIT-213	ENST00000543324	RSPO1	Q2MKA7	263 aa	Predicted RBP	5.36	□□□□□ -1.55
CIT-213	ENST00000543324	ALKBH6	Q3KRA9	238 aa		5.36	□□□□□ -1.55
CIT-213	ENST00000543324	ZNF718	Q3SXZ3	478 aa		5.36	□□□□□ -1.55
CIT-213	ENST00000543324	OXLD1	Q5BKU9	147 aa		5.36	□□□□□ -1.55
CIT-213	ENST00000543324	SLC35D3	Q5M8T2	416 aa		5.36	□□□□□ -1.55
CIT-213	ENST00000543324	FAM74A1	Q5RGS3	127 aa		5.36	□□□□□ -1.55
CIT-213	ENST00000543324	DCAF12L2	Q5VW00	463 aa		5.36	□□□□□ -1.55
CIT-213	ENST00000543324	ZNF774	Q6NX45	483 aa		5.36	□□□□□ -1.55
CIT-213	ENST00000543324	ADAMTSL5	Q6ZMM2	481 aa		5.36	□□□□□ -1.55
CIT-213	ENST00000543324		Q6ZR03	302 aa		5.36	□□□□□ -1.55
CIT-213	ENST00000543324	COLCA1	Q6ZS62	124 aa		5.36	□□□□□ -1.55
CIT-213	ENST00000543324	JAZF1	Q86VZ6	243 aa		5.36	□□□□□ -1.55
CIT-213	ENST00000543324	ANGPTL5	Q86XS5	388 aa		5.36	□□□□□ -1.55
CIT-213	ENST00000543324	IZUMO1	Q8IYV9	350 aa		5.36	□□□□□ -1.55
CIT-213	ENST00000543324	ZNF561	Q8N587	486 aa		5.36	□□□□□ -1.55
CIT-213	ENST00000543324	KIR3DL3	Q8N743	410 aa		5.36	□□□□□ -1.55
CIT-213	ENST00000543324	TMEM229B	Q8NBD8	167 aa		5.36	□□□□□ -1.55
CIT-213	ENST00000543324	OR52B4	Q8NGK2	314 aa		5.36	□□□□□ -1.55
CIT-213	ENST00000543324	OR1S2	Q8NGQ3	325 aa		5.36	□□□□□ -1.55
CIT-213	ENST00000543324	OR51F2	Q8NH61	342 aa		5.36	□□□□□ -1.55
CIT-213	ENST00000543324	OR51A7	Q8NH64	312 aa		5.36	□□□□□ -1.55
CIT-213	ENST00000543324	THAP6	Q8TBB0	222 aa		5.36	□□□□□ -1.55
CIT-213	ENST00000543324	SLC25A40	Q8TBP6	338 aa		5.36	□□□□□ -1.55
CIT-213	ENST00000543324	RXFP4	Q8TDU9	374 aa		5.36	□□□□□ -1.55
CIT-213	ENST00000543324	SNX33	Q8WV41	574 aa		5.36	□□□□□ -1.55
CIT-213	ENST00000543324	TNFAIP8L1	Q8WVP5	186 aa		5.36	□□□□□ -1.55
CIT-213	ENST00000543324	THRSP	Q92748	146 aa		5.36	□□□□□ -1.55
CIT-213	ENST00000543324	RASD2	Q96D21	266 aa		5.36	□□□□□ -1.55
CIT-213	ENST00000543324	MALSU1	Q96EH3	234 aa		5.36	□□□□□ -1.55
CIT-213	ENST00000543324	PELI1	Q96FA3	418 aa		5.36	□□□□□ -1.55
CIT-213	ENST00000543324	C4orf45	Q96LM5	186 aa		5.36	□□□□□ -1.55
CIT-213	ENST00000543324	DUX5	Q96PT3	197 aa		5.36	□□□□□ -1.55
CIT-213	ENST00000543324	DERL3	Q96Q80	235 aa		5.36	□□□□□ -1.55
CIT-213	ENST00000543324	TBX5	Q99593	518 aa		5.36	□□□□□ -1.55
CIT-213	ENST00000543324	SLC25A21	Q9BQT8	299 aa	Predicted RBP	5.36	□□□□□ -1.55
CIT-213	ENST00000543324	OR2J1	Q9GZK6	312 aa		5.36	□□□□□ -1.55
CIT-213	ENST00000543324	OR51B6	Q9H340	312 aa		5.36	□□□□□ -1.55
CIT-213	ENST00000543324	ZNF665	Q9H7R5	613 aa		5.36	□□□□□ -1.55
CIT-213	ENST00000543324	TUBA4B	Q9H853	241 aa		5.36	□□□□□ -1.55
CIT-213	ENST00000543324	SAP30L	Q9HAJ7	183 aa		5.36	□□□□□ -1.55
CIT-213	ENST00000543324	TUBG2	Q9NRH3	451 aa		5.36	□□□□□ -1.55
CIT-213	ENST00000543324	HIF1AN	Q9NWT6	349 aa		5.36	□□□□□ -1.55
CIT-213	ENST00000543324	TREM2	Q9NZC2	230 aa		5.36	□□□□□ -1.55
CIT-213	ENST00000543324	MRPL15	Q9P015	296 aa	Known RBP	5.36	□□□□□ -1.55
CIT-213	ENST00000543324	KLK11	Q9UBX7	282 aa		5.36	□□□□□ -1.55
CIT-213	ENST00000543324	OR5V1	Q9UGF6	321 aa		5.36	□□□□□ -1.55
CIT-213	ENST00000543324	RPUSD1	Q9UJJ7	312 aa	Known RBP	5.36	□□□□□ -1.55
CIT-213	ENST00000543324	ZDHHC8	Q9ULC8	765 aa		5.36	□□□□□ -1.55
CIT-213	ENST00000543324	WIPI2	Q9Y4P8	454 aa		5.36	□□□□□ -1.55
CIT-213	ENST00000543324	TIMM10B	Q9Y5J6	103 aa		5.36	□□□□□ -1.55
CIT-213	ENST00000543324	DMRT1	Q9Y5R6	373 aa		5.36	□□□□□ -1.55
CIT-213	ENST00000543324	DMBT1	Q9UGM3	2413 aa	Predicted RBP	5.36	□□□□□ -1.55
CIT-213	ENST00000543324	TRBV6-7	A0A0A0MS04	114 aa		5.35	□□□□□ -1.55
CIT-213	ENST00000543324	TRBV2	A0A0J9YWF9	115 aa		5.35	□□□□□ -1.55
CIT-213	ENST00000543324	TRBV5-5	A0A0J9YX44	114 aa		5.35	□□□□□ -1.55
CIT-213	ENST00000543324	GGT3P	A6NGU5	568 aa		5.35	□□□□□ -1.55
CIT-213	ENST00000543324	OR5H14	A6NHG9	310 aa		5.35	□□□□□ -1.55
CIT-213	ENST00000543324		F5H0A9	414 aa	Predicted RBP	5.35	□□□□□ -1.55
CIT-213	ENST00000543324	ARPC3	O15145	178 aa		5.35	□□□□□ -1.55
CIT-213	ENST00000543324	ST8SIA5	O15466	376 aa		5.35	□□□□□ -1.55
CIT-213	ENST00000543324	PPIH	O43447	177 aa	Known RBP	5.35	□□□□□ -1.55
CIT-213	ENST00000543324	NDUFB2	O95178	105 aa		5.35	□□□□□ -1.55

Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms