RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 NCOR1P1Q9H4R4 102 aa7.88□□□□□ -1.15
TNFRSF1A-214ENST00000543048 ISYNA1Q9NPH2 558 aa7.88□□□□□ -1.15
TNFRSF1A-214ENST00000543048 ING3Q9NXR8 418 aa7.88□□□□□ -1.15
TNFRSF1A-214ENST00000543048 IL36GQ9NZH8 169 aa7.88□□□□□ -1.15
TNFRSF1A-214ENST00000543048 FOXJ3Q9UPW0 622 aa7.88□□□□□ -1.15
TNFRSF1A-214ENST00000543048 MINOS1-NBL1R4GNA1 71 aa7.88□□□□□ -1.15
TNFRSF1A-214ENST00000543048 MGAM2Q2M2H8 2515 aa7.88□□□□□ -1.15
TNFRSF1A-214ENST00000543048 TET2Q6N021 2002 aaPredicted RBP7.87□□□□□ -1.15
TNFRSF1A-214ENST00000543048 IGHV2-26A0A0B4J1V2 119 aa7.87□□□□□ -1.15
TNFRSF1A-214ENST00000543048 TRAV24A0A0B4J272 114 aa7.87□□□□□ -1.15
TNFRSF1A-214ENST00000543048 PNMA8CA0A1B0GUJ8 204 aa7.87□□□□□ -1.15
TNFRSF1A-214ENST00000543048 A0A1W2PPK0 400 aa7.87□□□□□ -1.15
TNFRSF1A-214ENST00000543048 ZNF729A6NN14 1252 aaPredicted RBP7.87□□□□□ -1.15
TNFRSF1A-214ENST00000543048 CCRL2O00421 344 aa7.87□□□□□ -1.15
TNFRSF1A-214ENST00000543048 NOL3O60936 208 aaKnown RBP7.87□□□□□ -1.15
TNFRSF1A-214ENST00000543048 ZNF780AO75290 641 aaPredicted RBP7.87□□□□□ -1.15
TNFRSF1A-214ENST00000543048 MMP23AO75900 390 aa7.87□□□□□ -1.15
TNFRSF1A-214ENST00000543048 CLPXO76031 633 aa7.87□□□□□ -1.15
TNFRSF1A-214ENST00000543048 CDK2P24941 298 aa7.87□□□□□ -1.15
TNFRSF1A-214ENST00000543048 KIR2DS4P43632 304 aa7.87□□□□□ -1.15
TNFRSF1A-214ENST00000543048 OR3A4PP47883 348 aa7.87□□□□□ -1.15
TNFRSF1A-214ENST00000543048 KCNJ3P48549 501 aa7.87□□□□□ -1.15
TNFRSF1A-214ENST00000543048 PROK1P58294 105 aa7.87□□□□□ -1.15
TNFRSF1A-214ENST00000543048 DOC2BQ14184 412 aa7.87□□□□□ -1.15
TNFRSF1A-214ENST00000543048 GPR176Q14439 515 aa7.87□□□□□ -1.15
TNFRSF1A-214ENST00000543048 FAM189A2Q15884 450 aa7.87□□□□□ -1.15
TNFRSF1A-214ENST00000543048 SSX2Q16385 188 aa7.87□□□□□ -1.15
TNFRSF1A-214ENST00000543048 PAN3Q58A45 887 aaKnown RBP7.87□□□□□ -1.15
TNFRSF1A-214ENST00000543048 PRR31Q5SQ13 230 aa7.87□□□□□ -1.15
TNFRSF1A-214ENST00000543048 DYNAPQ8N1N2 210 aa7.87□□□□□ -1.15
TNFRSF1A-214ENST00000543048 ABHD12Q8N2K0 398 aa7.87□□□□□ -1.15
TNFRSF1A-214ENST00000543048 OSR2Q8N2R0 312 aa7.87□□□□□ -1.15
TNFRSF1A-214ENST00000543048 DTX3Q8N9I9 347 aa7.87□□□□□ -1.15
TNFRSF1A-214ENST00000543048 OR4D6Q8NGJ1 314 aa7.87□□□□□ -1.15
TNFRSF1A-214ENST00000543048 WFDC12Q8WWY7 111 aa7.87□□□□□ -1.15
TNFRSF1A-214ENST00000543048 UFD1Q92890 307 aa7.87□□□□□ -1.15
TNFRSF1A-214ENST00000543048 COQ2Q96H96 371 aa7.87□□□□□ -1.15
TNFRSF1A-214ENST00000543048 RAB18Q9NP72 206 aa7.87□□□□□ -1.15
TNFRSF1A-214ENST00000543048 ABCB10Q9NRK6 738 aa7.87□□□□□ -1.15
TNFRSF1A-214ENST00000543048 OR6C3Q9NZP0 311 aa7.87□□□□□ -1.15
TNFRSF1A-214ENST00000543048 FBLN5Q9UBX5 448 aa7.87□□□□□ -1.15
TNFRSF1A-214ENST00000543048 ST3GAL6Q9Y274 331 aa7.87□□□□□ -1.15
TNFRSF1A-214ENST00000543048 TRAV8-7A0A075B6U6 113 aa7.86□□□□□ -1.15
TNFRSF1A-214ENST00000543048 KBTBD11-OT1A0A1B0GTJ5 212 aa7.86□□□□□ -1.15
TNFRSF1A-214ENST00000543048 MEGF11A6BM72 1044 aa7.86□□□□□ -1.15
TNFRSF1A-214ENST00000543048 CCDC160A6NGH7 325 aa7.86□□□□□ -1.15
TNFRSF1A-214ENST00000543048 H3BUI4 141 aa7.86□□□□□ -1.15
TNFRSF1A-214ENST00000543048 TOR1AO14656 332 aa7.86□□□□□ -1.15
TNFRSF1A-214ENST00000543048 CGB3P0DN86 165 aa7.86□□□□□ -1.15
TNFRSF1A-214ENST00000543048 CGB7P0DN87 165 aa7.86□□□□□ -1.15
TNFRSF1A-214ENST00000543048 CD36P16671 472 aa7.86□□□□□ -1.15
TNFRSF1A-214ENST00000543048 CPEP16870 476 aa7.86□□□□□ -1.15
TNFRSF1A-214ENST00000543048 FSTP19883 344 aa7.86□□□□□ -1.15
TNFRSF1A-214ENST00000543048 HTR1DP28221 377 aa7.86□□□□□ -1.15
TNFRSF1A-214ENST00000543048 RAB13P51153 203 aa7.86□□□□□ -1.15
TNFRSF1A-214ENST00000543048 DYNLT3P51808 116 aa7.86□□□□□ -1.15
TNFRSF1A-214ENST00000543048 PRRX1P54821 245 aa7.86□□□□□ -1.15
TNFRSF1A-214ENST00000543048 SRSF4Q08170 494 aaKnown RBP7.86□□□□□ -1.15
TNFRSF1A-214ENST00000543048 GPR50Q13585 617 aa7.86□□□□□ -1.15
TNFRSF1A-214ENST00000543048 TPBGQ13641 420 aa7.86□□□□□ -1.15
TNFRSF1A-214ENST00000543048 ATXN7L3Q14CW9 347 aaPredicted RBP7.86□□□□□ -1.15
TNFRSF1A-214ENST00000543048 SSX1Q16384 188 aa7.86□□□□□ -1.15
TNFRSF1A-214ENST00000543048 PIGYQ3MUY2 71 aa7.86□□□□□ -1.15
TNFRSF1A-214ENST00000543048 PLA1AQ53H76 456 aa7.86□□□□□ -1.15
TNFRSF1A-214ENST00000543048 NHLRC3Q5JS37 347 aa7.86□□□□□ -1.15
TNFRSF1A-214ENST00000543048 LDLRAD2Q5SZI1 272 aa7.86□□□□□ -1.15
TNFRSF1A-214ENST00000543048 PRAMEF5Q5TYX0 476 aa7.86□□□□□ -1.15
TNFRSF1A-214ENST00000543048 GPR107Q5VW38 600 aa7.86□□□□□ -1.15
TNFRSF1A-214ENST00000543048 UNQ9370/PRO34162Q6UXP9 181 aa7.86□□□□□ -1.15
TNFRSF1A-214ENST00000543048 LINC00596Q86U02 117 aa7.86□□□□□ -1.15
TNFRSF1A-214ENST00000543048 CLVS1Q8IUQ0 354 aaPredicted RBP7.86□□□□□ -1.15
TNFRSF1A-214ENST00000543048 MS4A15Q8N5U1 240 aa7.86□□□□□ -1.15
TNFRSF1A-214ENST00000543048 SUMF2Q8NBJ7 301 aa7.86□□□□□ -1.15
TNFRSF1A-214ENST00000543048 NDNFQ8TB73 568 aa7.86□□□□□ -1.15
TNFRSF1A-214ENST00000543048 ZNF596Q8TC21 504 aa7.86□□□□□ -1.15
TNFRSF1A-214ENST00000543048 THRSPQ92748 146 aa7.86□□□□□ -1.15
TNFRSF1A-214ENST00000543048 YIPF6Q96EC8 236 aa7.86□□□□□ -1.15
TNFRSF1A-214ENST00000543048 DERL3Q96Q80 235 aa7.86□□□□□ -1.15
TNFRSF1A-214ENST00000543048 OR14A2Q96R54 314 aa7.86□□□□□ -1.15
TNFRSF1A-214ENST00000543048 NKX3-1Q99801 234 aaPredicted RBP7.86□□□□□ -1.15
TNFRSF1A-214ENST00000543048 CITED1Q99966 193 aa7.86□□□□□ -1.15
TNFRSF1A-214ENST00000543048 DPCDQ9BVM2 203 aaPredicted RBP7.86□□□□□ -1.15
TNFRSF1A-214ENST00000543048 FUNDC2Q9BWH2 189 aa7.86□□□□□ -1.15
TNFRSF1A-214ENST00000543048 PPIL3Q9H2H8 161 aaKnown RBP7.86□□□□□ -1.15
TNFRSF1A-214ENST00000543048 IFT22Q9H7X7 185 aa7.86□□□□□ -1.15
TNFRSF1A-214ENST00000543048 NDUFB11Q9NX14 153 aa7.86□□□□□ -1.15
TNFRSF1A-214ENST00000543048 DPM3Q9P2X0 92 aa7.86□□□□□ -1.15
TNFRSF1A-214ENST00000543048 HILPDAQ9Y5L2 63 aa7.86□□□□□ -1.15
TNFRSF1A-214ENST00000543048 CEPT1Q9Y6K0 416 aa7.86□□□□□ -1.15
TNFRSF1A-214ENST00000543048 VWFP04275 2813 aa7.86□□□□□ -1.15
TNFRSF1A-214ENST00000543048 MEIKINA0A087WXM9 373 aa7.85□□□□□ -1.15
TNFRSF1A-214ENST00000543048 LEUTXA8MZ59 168 aa7.85□□□□□ -1.15
TNFRSF1A-214ENST00000543048 ZNF701M0R085 212 aaPredicted RBP7.85□□□□□ -1.15
TNFRSF1A-214ENST00000543048 HSPB6O14558 160 aa7.85□□□□□ -1.15
TNFRSF1A-214ENST00000543048 GEMIN2O14893 280 aaKnown RBP7.85□□□□□ -1.15
TNFRSF1A-214ENST00000543048 PIN1P1O15428 100 aa7.85□□□□□ -1.15
TNFRSF1A-214ENST00000543048 GABARAPO95166 117 aa7.85□□□□□ -1.15
TNFRSF1A-214ENST00000543048 MAS1P04201 325 aa7.85□□□□□ -1.15
TNFRSF1A-214ENST00000543048 GTF2F2P13984 249 aa7.85□□□□□ -1.15
TNFRSF1A-214ENST00000543048 GZMHP20718 246 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms