RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 TRIOO75962 3097 aa2.9□□□□□ -1.95
SFSWAP-211ENST00000542813 IGKV6D-41A0A0C4DH26 115 aa2.89□□□□□ -1.95
SFSWAP-211ENST00000542813 A0A0G2JN53 185 aa2.89□□□□□ -1.95
SFSWAP-211ENST00000542813 A0A1B0GTI1 187 aa2.89□□□□□ -1.95
SFSWAP-211ENST00000542813 A0A1B0GV90 55 aa2.89□□□□□ -1.95
SFSWAP-211ENST00000542813 CIB4A0PJX0 185 aa2.89□□□□□ -1.95
SFSWAP-211ENST00000542813 TMEM213A2RRL7 107 aa2.89□□□□□ -1.95
SFSWAP-211ENST00000542813 C9orf170A2RU37 121 aa2.89□□□□□ -1.95
SFSWAP-211ENST00000542813 METTL15A6NJ78 407 aa2.89□□□□□ -1.95
SFSWAP-211ENST00000542813 RFPL4AA6NLU0 287 aa2.89□□□□□ -1.95
SFSWAP-211ENST00000542813 SRRM5B3KS81 715 aa2.89□□□□□ -1.95
SFSWAP-211ENST00000542813 RFPL4AL1F8VTS6 287 aa2.89□□□□□ -1.95
SFSWAP-211ENST00000542813 M0QXV9 152 aa2.89□□□□□ -1.95
SFSWAP-211ENST00000542813 DNASE2O00115 360 aaPredicted RBP2.89□□□□□ -1.95
SFSWAP-211ENST00000542813 KCNK1O00180 336 aa2.89□□□□□ -1.95
SFSWAP-211ENST00000542813 PLPP3O14495 311 aa2.89□□□□□ -1.95
SFSWAP-211ENST00000542813 XKRYO14609 159 aa2.89□□□□□ -1.95
SFSWAP-211ENST00000542813 PHYHO14832 338 aa2.89□□□□□ -1.95
SFSWAP-211ENST00000542813 LINC01565O15544 149 aa2.89□□□□□ -1.95
SFSWAP-211ENST00000542813 UGT2B11O75310 529 aa2.89□□□□□ -1.95
SFSWAP-211ENST00000542813 POP7O75817 140 aaKnown RBP2.89□□□□□ -1.95
SFSWAP-211ENST00000542813 OR2B3O76000 313 aa2.89□□□□□ -1.95
SFSWAP-211ENST00000542813 GABARAPO95166 117 aa2.89□□□□□ -1.95
SFSWAP-211ENST00000542813 RCBTB2O95199 551 aa2.89□□□□□ -1.95
SFSWAP-211ENST00000542813 ACTL6AO96019 429 aa2.89□□□□□ -1.95
SFSWAP-211ENST00000542813 IFNA10P01566 189 aa2.89□□□□□ -1.95
SFSWAP-211ENST00000542813 CRHP06850 196 aa2.89□□□□□ -1.95
SFSWAP-211ENST00000542813 GIPP09681 153 aaPredicted RBP2.89□□□□□ -1.95
SFSWAP-211ENST00000542813 LINC00614P0C842 121 aa2.89□□□□□ -1.95
SFSWAP-211ENST00000542813 LIPCP11150 499 aa2.89□□□□□ -1.95
SFSWAP-211ENST00000542813 ERGP11308 486 aa2.89□□□□□ -1.95
SFSWAP-211ENST00000542813 ADRB3P13945 408 aa2.89□□□□□ -1.95
SFSWAP-211ENST00000542813 CD36P16671 472 aa2.89□□□□□ -1.95
SFSWAP-211ENST00000542813 RAB3BP20337 219 aa2.89□□□□□ -1.95
SFSWAP-211ENST00000542813 OGNP20774 298 aaKnown RBP2.89□□□□□ -1.95
SFSWAP-211ENST00000542813 HLA-DMAP28067 261 aa2.89□□□□□ -1.95
SFSWAP-211ENST00000542813 LOXP28300 417 aaPredicted RBP2.89□□□□□ -1.95
SFSWAP-211ENST00000542813 TGFBR1P36897 503 aa2.89□□□□□ -1.95
SFSWAP-211ENST00000542813 CEACAM6P40199 344 aa2.89□□□□□ -1.95
SFSWAP-211ENST00000542813 MAGEA3P43357 314 aa2.89□□□□□ -1.95
SFSWAP-211ENST00000542813 MAGEA12P43365 314 aa2.89□□□□□ -1.95
SFSWAP-211ENST00000542813 NCBP2P52298 156 aaKnown RBP eCLIP2.89□□□□□ -1.95
SFSWAP-211ENST00000542813 EMP2P54851 167 aa2.89□□□□□ -1.95
SFSWAP-211ENST00000542813 RAB25P57735 213 aa2.89□□□□□ -1.95
SFSWAP-211ENST00000542813 MLF1P58340 268 aa2.89□□□□□ -1.95
SFSWAP-211ENST00000542813 TFAMQ00059 246 aaKnown RBP2.89□□□□□ -1.95
SFSWAP-211ENST00000542813 TPBGQ13641 420 aa2.89□□□□□ -1.95
SFSWAP-211ENST00000542813 DGCR6Q14129 220 aa2.89□□□□□ -1.95
SFSWAP-211ENST00000542813 PYCR3Q53H96 274 aa2.89□□□□□ -1.95
SFSWAP-211ENST00000542813 DNLZQ5SXM8 178 aa2.89□□□□□ -1.95
SFSWAP-211ENST00000542813 FAM27D1Q5T7N8 215 aa2.89□□□□□ -1.95
SFSWAP-211ENST00000542813 BAIAP2L2Q6UXY1 529 aa2.89□□□□□ -1.95
SFSWAP-211ENST00000542813 ZNF497Q6ZNH5 498 aa2.89□□□□□ -1.95
SFSWAP-211ENST00000542813 DPPA2Q7Z7J5 298 aa2.89□□□□□ -1.95
SFSWAP-211ENST00000542813 COMMD7Q86VX2 200 aa2.89□□□□□ -1.95
SFSWAP-211ENST00000542813 P2RY8Q86VZ1 359 aa2.89□□□□□ -1.95
SFSWAP-211ENST00000542813 PHF13Q86YI8 300 aaPredicted RBP2.89□□□□□ -1.95
SFSWAP-211ENST00000542813 RAB43Q86YS6 212 aa2.89□□□□□ -1.95
SFSWAP-211ENST00000542813 GID4Q8IVV7 300 aa2.89□□□□□ -1.95
SFSWAP-211ENST00000542813 ZNF525Q8N782 197 aa2.89□□□□□ -1.95
SFSWAP-211ENST00000542813 NECAP1Q8NC96 275 aa2.89□□□□□ -1.95
SFSWAP-211ENST00000542813 ZNF738Q8NE65 137 aa2.89□□□□□ -1.95
SFSWAP-211ENST00000542813 OR5T1Q8NG75 326 aa2.89□□□□□ -1.95
SFSWAP-211ENST00000542813 NEIL3Q8TAT5 605 aa2.89□□□□□ -1.95
SFSWAP-211ENST00000542813 DOK4Q8TEW6 326 aa2.89□□□□□ -1.95
SFSWAP-211ENST00000542813 SFT2D1Q8WV19 159 aa2.89□□□□□ -1.95
SFSWAP-211ENST00000542813 CANT1Q8WVQ1 401 aa2.89□□□□□ -1.95
SFSWAP-211ENST00000542813 CYGBQ8WWM9 190 aa2.89□□□□□ -1.95
SFSWAP-211ENST00000542813 SLC7A6Q92536 515 aa2.89□□□□□ -1.95
SFSWAP-211ENST00000542813 PHF3Q92576 2039 aaKnown RBP2.89□□□□□ -1.95
SFSWAP-211ENST00000542813 ZNF599Q96NL3 588 aa2.89□□□□□ -1.95
SFSWAP-211ENST00000542813 SDHCQ99643 169 aaPredicted RBP2.89□□□□□ -1.95
SFSWAP-211ENST00000542813 GABRG3Q99928 467 aa2.89□□□□□ -1.95
SFSWAP-211ENST00000542813 APOL4Q9BPW4 351 aa2.89□□□□□ -1.95
SFSWAP-211ENST00000542813 KRTAP4-4Q9BYR3 166 aa2.89□□□□□ -1.95
SFSWAP-211ENST00000542813 DEFB126Q9BYW3 111 aa2.89□□□□□ -1.95
SFSWAP-211ENST00000542813 SLIRPQ9GZT3 109 aaKnown RBP2.89□□□□□ -1.95
SFSWAP-211ENST00000542813 OR51B6Q9H340 312 aa2.89□□□□□ -1.95
SFSWAP-211ENST00000542813 CLMPQ9H6B4 373 aa2.89□□□□□ -1.95
SFSWAP-211ENST00000542813 ZDHHC4Q9NPG8 344 aa2.89□□□□□ -1.95
SFSWAP-211ENST00000542813 ISYNA1Q9NPH2 558 aa2.89□□□□□ -1.95
SFSWAP-211ENST00000542813 ASCL3Q9NQ33 180 aa2.89□□□□□ -1.95
SFSWAP-211ENST00000542813 COPZ2Q9P299 210 aa2.89□□□□□ -1.95
SFSWAP-211ENST00000542813 OPTCQ9UBM4 332 aa2.89□□□□□ -1.95
SFSWAP-211ENST00000542813 TP53TG5Q9Y2B4 290 aa2.89□□□□□ -1.95
SFSWAP-211ENST00000542813 COQ4Q9Y3A0 265 aa2.89□□□□□ -1.95
SFSWAP-211ENST00000542813 LOC285556D6RIA3 1793 aa2.89□□□□□ -1.95
SFSWAP-211ENST00000542813 VPS13AQ96RL7 3174 aa2.89□□□□□ -1.95
SFSWAP-211ENST00000542813 MYH9P35579 1960 aaKnown RBP2.89□□□□□ -1.95
SFSWAP-211ENST00000542813 IGF2RP11717 2491 aa2.88□□□□□ -1.95
SFSWAP-211ENST00000542813 TECTAO75443 2155 aa2.88□□□□□ -1.95
SFSWAP-211ENST00000542813 RLFQ13129 1914 aa2.88□□□□□ -1.95
SFSWAP-211ENST00000542813 PRAMEF26H0Y7S4 382 aa2.88□□□□□ -1.95
SFSWAP-211ENST00000542813 CLDN34H7C241 214 aa2.88□□□□□ -1.95
SFSWAP-211ENST00000542813 H7C417 338 aa2.88□□□□□ -1.95
SFSWAP-211ENST00000542813 UPK1AO00322 258 aa2.88□□□□□ -1.95
SFSWAP-211ENST00000542813 SULT1C2O00338 296 aa2.88□□□□□ -1.95
SFSWAP-211ENST00000542813 ZNF593O00488 134 aaPredicted RBP2.88□□□□□ -1.95
SFSWAP-211ENST00000542813 KPNA3O00505 521 aaPredicted RBP2.88□□□□□ -1.95
SFSWAP-211ENST00000542813 COCHO43405 550 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms