RNA–Protein interactions for RNA: ENST00000541286.5

SFSWAP-210, Transcript of splicing factor SWAP, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-210ENST00000541286 PHYHD1Q5SRE7 291 aa12.38□□□□□ -0.43
SFSWAP-210ENST00000541286 AADACL3Q5VUY0 350 aa12.38□□□□□ -0.43
SFSWAP-210ENST00000541286 FAHD2BQ6P2I3 314 aaPredicted RBP12.38□□□□□ -0.43
SFSWAP-210ENST00000541286 IGF2-ASQ6U949 168 aa12.38□□□□□ -0.43
SFSWAP-210ENST00000541286 REC114Q7Z4M0 266 aa12.38□□□□□ -0.43
SFSWAP-210ENST00000541286 SUMF2Q8NBJ7 301 aa12.38□□□□□ -0.43
SFSWAP-210ENST00000541286 FNDC9Q8TBE3 224 aa12.38□□□□□ -0.43
SFSWAP-210ENST00000541286 FAHD2AQ96GK7 314 aa12.38□□□□□ -0.43
SFSWAP-210ENST00000541286 MCTS1Q9ULC4 181 aaKnown RBP12.38□□□□□ -0.43
SFSWAP-210ENST00000541286 LRBAP50851 2863 aa12.38□□□□□ -0.43
SFSWAP-210ENST00000541286 MAP1AP78559 2803 aaPredicted RBP12.38□□□□□ -0.43
SFSWAP-210ENST00000541286 DBX1A6NMT0 343 aa12.38□□□□□ -0.43
SFSWAP-210ENST00000541286 TSTD3H0UI37 97 aa12.38□□□□□ -0.43
SFSWAP-210ENST00000541286 ZNF708P17019 499 aa12.38□□□□□ -0.43
SFSWAP-210ENST00000541286 FPR2P25090 351 aa12.38□□□□□ -0.43
SFSWAP-210ENST00000541286 GDF1P27539 372 aa12.38□□□□□ -0.43
SFSWAP-210ENST00000541286 AKR1C8PQ5T2L2 129 aa12.38□□□□□ -0.43
SFSWAP-210ENST00000541286 HEPN1Q6WQI6 88 aa12.38□□□□□ -0.43
SFSWAP-210ENST00000541286 ZFP62Q8NB50 900 aaPredicted RBP12.38□□□□□ -0.43
SFSWAP-210ENST00000541286 OR2M3Q8NG83 312 aa12.38□□□□□ -0.43
SFSWAP-210ENST00000541286 OXGR1Q96P68 337 aa12.38□□□□□ -0.43
SFSWAP-210ENST00000541286 SCGB3A2Q96PL1 93 aa12.38□□□□□ -0.43
SFSWAP-210ENST00000541286 PECRQ9BY49 303 aa12.38□□□□□ -0.43
SFSWAP-210ENST00000541286 NUDT19A8MXV4 375 aa12.37□□□□□ -0.43
SFSWAP-210ENST00000541286 HLA-GP17693 338 aa12.37□□□□□ -0.43
SFSWAP-210ENST00000541286 TBPP20226 339 aa12.37□□□□□ -0.43
SFSWAP-210ENST00000541286 PTGER4P35408 488 aa12.37□□□□□ -0.43
SFSWAP-210ENST00000541286 FOXO1Q12778 655 aa12.37□□□□□ -0.43
SFSWAP-210ENST00000541286 ABCA11PQ4W5N1 156 aa12.37□□□□□ -0.43
SFSWAP-210ENST00000541286 ZNF610Q8N9Z0 462 aa12.37□□□□□ -0.43
SFSWAP-210ENST00000541286 MRPL24Q96A35 216 aaKnown RBP12.37□□□□□ -0.43
SFSWAP-210ENST00000541286 LYZL4Q96KX0 146 aa12.37□□□□□ -0.43
SFSWAP-210ENST00000541286 RAB18Q9NP72 206 aa12.37□□□□□ -0.43
SFSWAP-210ENST00000541286 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.37□□□□□ -0.43
SFSWAP-210ENST00000541286 A0A087WZY1 265 aa12.37□□□□□ -0.43
SFSWAP-210ENST00000541286 TP53I11O14683 189 aa12.37□□□□□ -0.43
SFSWAP-210ENST00000541286 IGHV3-9P01782 118 aa12.37□□□□□ -0.43
SFSWAP-210ENST00000541286 UBE2KP61086 200 aa12.37□□□□□ -0.43
SFSWAP-210ENST00000541286 SGPP2Q8IWX5 399 aa12.37□□□□□ -0.43
SFSWAP-210ENST00000541286 SH2D2AQ9NP31 389 aa12.37□□□□□ -0.43
SFSWAP-210ENST00000541286 MEMO1Q9Y316 297 aa12.37□□□□□ -0.43
SFSWAP-210ENST00000541286 ARHGAP21Q5T5U3 1957 aa12.37□□□□□ -0.43
SFSWAP-210ENST00000541286 ZIC3O60481 467 aa12.37□□□□□ -0.43
SFSWAP-210ENST00000541286 IFNA21P01568 189 aa12.37□□□□□ -0.43
SFSWAP-210ENST00000541286 LCATP04180 440 aa12.37□□□□□ -0.43
SFSWAP-210ENST00000541286 COX5BP10606 129 aa12.37□□□□□ -0.43
SFSWAP-210ENST00000541286 MEX3BQ6ZN04 569 aaKnown RBP12.37□□□□□ -0.43
SFSWAP-210ENST00000541286 OR5L1Q8NGL2 311 aa12.37□□□□□ -0.43
SFSWAP-210ENST00000541286 RAB39BQ96DA2 213 aa12.37□□□□□ -0.43
SFSWAP-210ENST00000541286 WFDC1Q9HC57 220 aa12.37□□□□□ -0.43
SFSWAP-210ENST00000541286 PARP11Q9NR21 331 aa12.37□□□□□ -0.43
SFSWAP-210ENST00000541286 M0R135 149 aa12.36□□□□□ -0.43
SFSWAP-210ENST00000541286 CST4P01036 141 aa12.36□□□□□ -0.43
SFSWAP-210ENST00000541286 TRGC1P0CF51 173 aa12.36□□□□□ -0.43
SFSWAP-210ENST00000541286 MEOX1P50221 254 aa12.36□□□□□ -0.43
SFSWAP-210ENST00000541286 SOX8P57073 446 aa12.36□□□□□ -0.43
SFSWAP-210ENST00000541286 TAS2R46P59540 309 aa12.36□□□□□ -0.43
SFSWAP-210ENST00000541286 SNAI3Q3KNW1 292 aa12.36□□□□□ -0.43
SFSWAP-210ENST00000541286 SLC25A47Q6Q0C1 308 aa12.36□□□□□ -0.43
SFSWAP-210ENST00000541286 OR2M7Q8NG81 312 aa12.36□□□□□ -0.43
SFSWAP-210ENST00000541286 OR10AD1Q8NGE0 317 aa12.36□□□□□ -0.43
SFSWAP-210ENST00000541286 OR14L1PQ8NHC6 308 aa12.36□□□□□ -0.43
SFSWAP-210ENST00000541286 HPSE2Q8WWQ2 592 aa12.36□□□□□ -0.43
SFSWAP-210ENST00000541286 ZNF799Q96GE5 643 aa12.36□□□□□ -0.43
SFSWAP-210ENST00000541286 AQP10Q96PS8 301 aa12.36□□□□□ -0.43
SFSWAP-210ENST00000541286 TAAR6Q96RI8 345 aa12.36□□□□□ -0.43
SFSWAP-210ENST00000541286 ULBP2Q9BZM5 246 aa12.36□□□□□ -0.43
SFSWAP-210ENST00000541286 HDGFL3Q9Y3E1 203 aa12.36□□□□□ -0.43
SFSWAP-210ENST00000541286 EREGO14944 169 aa12.36□□□□□ -0.43
SFSWAP-210ENST00000541286 RRP8O43159 456 aaKnown RBP12.36□□□□□ -0.43
SFSWAP-210ENST00000541286 PET100P0DJ07 73 aa12.36□□□□□ -0.43
SFSWAP-210ENST00000541286 PGA5P0DJD9 388 aa12.36□□□□□ -0.43
SFSWAP-210ENST00000541286 MSR1P21757 451 aa12.36□□□□□ -0.43
SFSWAP-210ENST00000541286 CCNOP22674 350 aa12.36□□□□□ -0.43
SFSWAP-210ENST00000541286 TNFSF10P50591 281 aa12.36□□□□□ -0.43
SFSWAP-210ENST00000541286 ZNF766Q5HY98 468 aa12.36□□□□□ -0.43
SFSWAP-210ENST00000541286 VAX1Q5SQQ9 334 aa12.36□□□□□ -0.43
SFSWAP-210ENST00000541286 OR6X1Q8NH79 312 aa12.36□□□□□ -0.43
SFSWAP-210ENST00000541286 FRZBQ92765 325 aa12.36□□□□□ -0.43
SFSWAP-210ENST00000541286 PACRGQ96M98 296 aaPredicted RBP12.36□□□□□ -0.43
SFSWAP-210ENST00000541286 SLC35B3Q9H1N7 401 aa12.36□□□□□ -0.43
SFSWAP-210ENST00000541286 C19orf12Q9NSK7 152 aa12.36□□□□□ -0.43
SFSWAP-210ENST00000541286 TRBV6-7A0A0A0MS04 114 aa12.35□□□□□ -0.43
SFSWAP-210ENST00000541286 H3BQ15 152 aa12.35□□□□□ -0.43
SFSWAP-210ENST00000541286 OR5H8P0DN80 308 aa12.35□□□□□ -0.43
SFSWAP-210ENST00000541286 PIGPP57054 158 aa12.35□□□□□ -0.43
SFSWAP-210ENST00000541286 PLGLB1Q02325 96 aa12.35□□□□□ -0.43
SFSWAP-210ENST00000541286 PNLIPRP3Q17RR3 467 aa12.35□□□□□ -0.43
SFSWAP-210ENST00000541286 TTTY12Q9BZ98 90 aa12.35□□□□□ -0.43
SFSWAP-210ENST00000541286 MOB1AQ9H8S9 216 aa12.35□□□□□ -0.43
SFSWAP-210ENST00000541286 PNRC2Q9NPJ4 139 aaKnown RBP12.35□□□□□ -0.43
SFSWAP-210ENST00000541286 ZNF587BE7ETH6 402 aa12.35□□□□□ -0.43
SFSWAP-210ENST00000541286 SP1P08047 785 aa12.35□□□□□ -0.43
SFSWAP-210ENST00000541286 MMP9P14780 707 aa12.35□□□□□ -0.43
SFSWAP-210ENST00000541286 SUMO3P55854 103 aaPredicted RBP12.35□□□□□ -0.43
SFSWAP-210ENST00000541286 TBR1Q16650 682 aa12.35□□□□□ -0.43
SFSWAP-210ENST00000541286 C9orf135Q5VTT2 229 aa12.35□□□□□ -0.43
SFSWAP-210ENST00000541286 GJC3Q8NFK1 279 aa12.35□□□□□ -0.43
SFSWAP-210ENST00000541286 ZNF845Q96IR2 970 aaPredicted RBP12.35□□□□□ -0.43
SFSWAP-210ENST00000541286 GPHA2Q96T91 129 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms