RNA–Protein interactions for RNA: ENST00000541102.1

LTBR-209, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5 BASIC

Gene LTBR, Length 1,084 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-209ENST00000541102 SHISA2Q6UWI4 295 aa11.6□□□□□ -0.55
LTBR-209ENST00000541102 GDPGP1Q6ZNW5 385 aa11.6□□□□□ -0.55
LTBR-209ENST00000541102 GDPD3Q7L5L3 318 aa11.6□□□□□ -0.55
LTBR-209ENST00000541102 TCF23Q7RTU1 214 aa11.6□□□□□ -0.55
LTBR-209ENST00000541102 GPR141Q7Z602 305 aa11.6□□□□□ -0.55
LTBR-209ENST00000541102 TPRA1Q86W33 373 aa11.6□□□□□ -0.55
LTBR-209ENST00000541102 ANKRD13BQ86YJ7 626 aa11.6□□□□□ -0.55
LTBR-209ENST00000541102 OR8H2Q8N162 312 aa11.6□□□□□ -0.55
LTBR-209ENST00000541102 COQ2Q96H96 371 aa11.6□□□□□ -0.55
LTBR-209ENST00000541102 SNX22Q96L94 193 aa11.6□□□□□ -0.55
LTBR-209ENST00000541102 NICN1Q9BSH3 213 aa11.6□□□□□ -0.55
LTBR-209ENST00000541102 ING3Q9NXR8 418 aa11.6□□□□□ -0.55
LTBR-209ENST00000541102 C1RLQ9NZP8 487 aa11.6□□□□□ -0.55
LTBR-209ENST00000541102 STEAP1Q9UHE8 339 aa11.6□□□□□ -0.55
LTBR-209ENST00000541102 hCG_1809904A0A1W2PP81 198 aa11.59□□□□□ -0.55
LTBR-209ENST00000541102 A0A1W2PPE2 198 aa11.59□□□□□ -0.55
LTBR-209ENST00000541102 A0A1W2PR64 198 aa11.59□□□□□ -0.55
LTBR-209ENST00000541102 A0A1W2PRV1 198 aa11.59□□□□□ -0.55
LTBR-209ENST00000541102 BTBD17A6NE02 478 aa11.59□□□□□ -0.55
LTBR-209ENST00000541102 POM121CA8CG34 1229 aa11.59□□□□□ -0.55
LTBR-209ENST00000541102 NOTOA8MTQ0 251 aa11.59□□□□□ -0.55
LTBR-209ENST00000541102 AIPO00170 330 aa11.59□□□□□ -0.55
LTBR-209ENST00000541102 ZNF780AO75290 641 aaPredicted RBP11.59□□□□□ -0.55
LTBR-209ENST00000541102 GABARAPO95166 117 aa11.59□□□□□ -0.55
LTBR-209ENST00000541102 RPL5P46777 297 aaKnown RBP11.59□□□□□ -0.55
LTBR-209ENST00000541102 GLIPR1P48060 266 aa11.59□□□□□ -0.55
LTBR-209ENST00000541102 BMXP51813 675 aa11.59□□□□□ -0.55
LTBR-209ENST00000541102 RPS27AP62979 156 aaKnown RBP11.59□□□□□ -0.55
LTBR-209ENST00000541102 RELBQ01201 579 aa11.59□□□□□ -0.55
LTBR-209ENST00000541102 AESQ08117 197 aa11.59□□□□□ -0.55
LTBR-209ENST00000541102 GPR176Q14439 515 aa11.59□□□□□ -0.55
LTBR-209ENST00000541102 ATXN7L3Q14CW9 347 aaPredicted RBP11.59□□□□□ -0.55
LTBR-209ENST00000541102 TIMM50Q3ZCQ8 353 aa11.59□□□□□ -0.55
LTBR-209ENST00000541102 SFXN4Q6P4A7 337 aa11.59□□□□□ -0.55
LTBR-209ENST00000541102 ZNF782Q6ZMW2 699 aaPredicted RBP11.59□□□□□ -0.55
LTBR-209ENST00000541102 SUMF2Q8NBJ7 301 aa11.59□□□□□ -0.55
LTBR-209ENST00000541102 OR4F5Q8NH21 305 aa11.59□□□□□ -0.55
LTBR-209ENST00000541102 SGMS2Q8NHU3 365 aa11.59□□□□□ -0.55
LTBR-209ENST00000541102 PLPPR1Q8TBJ4 325 aa11.59□□□□□ -0.55
LTBR-209ENST00000541102 C17orf50Q8WW18 174 aa11.59□□□□□ -0.55
LTBR-209ENST00000541102 DYRK2Q92630 601 aa11.59□□□□□ -0.55
LTBR-209ENST00000541102 HEXA-AS1Q9H8Q6 139 aa11.59□□□□□ -0.55
LTBR-209ENST00000541102 BEX1Q9HBH7 125 aa11.59□□□□□ -0.55
LTBR-209ENST00000541102 DAPK2Q9UIK4 370 aa11.59□□□□□ -0.55
LTBR-209ENST00000541102 DSCAML1Q8TD84 2053 aa11.59□□□□□ -0.55
LTBR-209ENST00000541102 OR7C1O76099 320 aaPredicted RBP11.58□□□□□ -0.56
LTBR-209ENST00000541102 UBBP0CG47 229 aa11.58□□□□□ -0.56
LTBR-209ENST00000541102 SNRPBP14678 240 aaKnown RBP11.58□□□□□ -0.56
LTBR-209ENST00000541102 PSMD7P51665 324 aa11.58□□□□□ -0.56
LTBR-209ENST00000541102 PAN3Q58A45 887 aaKnown RBP11.58□□□□□ -0.56
LTBR-209ENST00000541102 C11orf42Q8N5U0 333 aa11.58□□□□□ -0.56
LTBR-209ENST00000541102 NDNFQ8TB73 568 aa11.58□□□□□ -0.56
LTBR-209ENST00000541102 DPCDQ9BVM2 203 aaPredicted RBP11.58□□□□□ -0.56
LTBR-209ENST00000541102 TMEM59Q9BXS4 323 aa11.58□□□□□ -0.56
LTBR-209ENST00000541102 BARHL1Q9BZE3 327 aa11.58□□□□□ -0.56
LTBR-209ENST00000541102 LPAR5Q9H1C0 372 aa11.58□□□□□ -0.56
LTBR-209ENST00000541102 IFT22Q9H7X7 185 aa11.58□□□□□ -0.56
LTBR-209ENST00000541102 LIN7BQ9HAP6 207 aa11.58□□□□□ -0.56
LTBR-209ENST00000541102 ZNRD1Q9P1U0 126 aa11.58□□□□□ -0.56
LTBR-209ENST00000541102 GHRLQ9UBU3 117 aa11.58□□□□□ -0.56
LTBR-209ENST00000541102 GLS2Q9UI32 602 aa11.58□□□□□ -0.56
LTBR-209ENST00000541102 SCOCQ9UIL1 159 aa11.58□□□□□ -0.56
LTBR-209ENST00000541102 KIAA2026Q5HYC2 2103 aa11.57□□□□□ -0.56
LTBR-209ENST00000541102 TRAV39A0A0B4J263 110 aa11.57□□□□□ -0.56
LTBR-209ENST00000541102 SOCS1O15524 211 aa11.57□□□□□ -0.56
LTBR-209ENST00000541102 NDUFA7O95182 113 aa11.57□□□□□ -0.56
LTBR-209ENST00000541102 PAX6P26367 422 aa11.57□□□□□ -0.56
LTBR-209ENST00000541102 SERPINB10P48595 397 aa11.57□□□□□ -0.56
LTBR-209ENST00000541102 DLX6P56179 175 aa11.57□□□□□ -0.56
LTBR-209ENST00000541102 MIDNQ504T8 468 aa11.57□□□□□ -0.56
LTBR-209ENST00000541102 ATAD3CQ5T2N8 411 aa11.57□□□□□ -0.56
LTBR-209ENST00000541102 CLVS1Q8IUQ0 354 aaPredicted RBP11.57□□□□□ -0.56
LTBR-209ENST00000541102 CHST4Q8NCG5 386 aa11.57□□□□□ -0.56
LTBR-209ENST00000541102 OR5H6Q8NGV6 325 aa11.57□□□□□ -0.56
LTBR-209ENST00000541102 KCNG3Q8TAE7 436 aa11.57□□□□□ -0.56
LTBR-209ENST00000541102 MRPS24Q96EL2 167 aaKnown RBP11.57□□□□□ -0.56
LTBR-209ENST00000541102 TM2D1Q9BX74 207 aa11.57□□□□□ -0.56
LTBR-209ENST00000541102 CST11Q9H112 138 aa11.57□□□□□ -0.56
LTBR-209ENST00000541102 RCC2Q9P258 522 aaKnown RBP11.57□□□□□ -0.56
LTBR-209ENST00000541102 FBLN5Q9UBX5 448 aa11.57□□□□□ -0.56
LTBR-209ENST00000541102 MMP24Q9Y5R2 645 aa11.57□□□□□ -0.56
LTBR-209ENST00000541102 A0A1B0GUS0 222 aa11.56□□□□□ -0.56
LTBR-209ENST00000541102 CLPSL1A2RUU4 121 aa11.56□□□□□ -0.56
LTBR-209ENST00000541102 FOXI3A8MTJ6 420 aaPredicted RBP11.56□□□□□ -0.56
LTBR-209ENST00000541102 MGST3O14880 152 aa11.56□□□□□ -0.56
LTBR-209ENST00000541102 ZNF728P0DKX0 622 aa11.56□□□□□ -0.56
LTBR-209ENST00000541102 P2RX3P56373 397 aa11.56□□□□□ -0.56
LTBR-209ENST00000541102 LGALS4P56470 323 aa11.56□□□□□ -0.56
LTBR-209ENST00000541102 SRSF4Q08170 494 aaKnown RBP11.56□□□□□ -0.56
LTBR-209ENST00000541102 SPCS2Q15005 226 aa11.56□□□□□ -0.56
LTBR-209ENST00000541102 MPV17LQ2QL34 196 aa11.56□□□□□ -0.56
LTBR-209ENST00000541102 MOGAT2Q3SYC2 334 aa11.56□□□□□ -0.56
LTBR-209ENST00000541102 IDNKQ5T6J7 187 aa11.56□□□□□ -0.56
LTBR-209ENST00000541102 RSBN1Q5VWQ0 802 aaPredicted RBP11.56□□□□□ -0.56
LTBR-209ENST00000541102 OLFML2AQ68BL7 652 aa11.56□□□□□ -0.56
LTBR-209ENST00000541102 RAB12Q6IQ22 244 aa11.56□□□□□ -0.56
LTBR-209ENST00000541102 OR2W3Q7Z3T1 314 aa11.56□□□□□ -0.56
LTBR-209ENST00000541102 BEND2Q8NDZ0 799 aa11.56□□□□□ -0.56
LTBR-209ENST00000541102 LGALS14Q8TCE9 139 aa11.56□□□□□ -0.56
LTBR-209ENST00000541102 SSX3Q99909 188 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms