RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 PKIBQ9C010 78 aa3.52□□□□□ -1.85
SNHG1-214ENST00000540865 TUBA4BQ9H853 241 aa3.52□□□□□ -1.85
SNHG1-214ENST00000540865 NDUFAF4Q9P032 175 aa3.52□□□□□ -1.85
SNHG1-214ENST00000540865 ACTR3BQ9P1U1 418 aa3.52□□□□□ -1.85
SNHG1-214ENST00000540865 KIAA1456Q9P272 454 aa3.52□□□□□ -1.85
SNHG1-214ENST00000540865 ENPP5Q9UJA9 477 aa3.52□□□□□ -1.85
SNHG1-214ENST00000540865 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.52□□□□□ -1.85
SNHG1-214ENST00000540865 STUB1Q9UNE7 303 aa3.52□□□□□ -1.85
SNHG1-214ENST00000540865 SLC7A11Q9UPY5 501 aa3.52□□□□□ -1.85
SNHG1-214ENST00000540865 AP3M1Q9Y2T2 418 aa3.52□□□□□ -1.85
SNHG1-214ENST00000540865 FAM172BPA6NC97 362 aa3.51□□□□□ -1.85
SNHG1-214ENST00000540865 CXorf65A6NEN9 183 aa3.51□□□□□ -1.85
SNHG1-214ENST00000540865 NUPR2A6NF83 97 aa3.51□□□□□ -1.85
SNHG1-214ENST00000540865 FAM183AA6NL82 134 aa3.51□□□□□ -1.85
SNHG1-214ENST00000540865 BBIP1A8MTZ0 92 aa3.51□□□□□ -1.85
SNHG1-214ENST00000540865 H0Y980 276 aa3.51□□□□□ -1.85
SNHG1-214ENST00000540865 CXCR6O00574 342 aa3.51□□□□□ -1.85
SNHG1-214ENST00000540865 DLGAP1O14490 977 aa3.51□□□□□ -1.85
SNHG1-214ENST00000540865 ARPC1BO15143 372 aaKnown RBP3.51□□□□□ -1.85
SNHG1-214ENST00000540865 MPZL2O60487 215 aa3.51□□□□□ -1.85
SNHG1-214ENST00000540865 HAND1O96004 215 aa3.51□□□□□ -1.85
SNHG1-214ENST00000540865 IGKV1D-33P01593 117 aa3.51□□□□□ -1.85
SNHG1-214ENST00000540865 IGKV1-33P01594 117 aa3.51□□□□□ -1.85
SNHG1-214ENST00000540865 GYPBP06028 91 aa3.51□□□□□ -1.85
SNHG1-214ENST00000540865 LYNP07948 512 aa3.51□□□□□ -1.85
SNHG1-214ENST00000540865 H2AFXP16104 143 aaPredicted RBP3.51□□□□□ -1.85
SNHG1-214ENST00000540865 GABRR1P24046 479 aa3.51□□□□□ -1.85
SNHG1-214ENST00000540865 IFNGR2P38484 337 aa3.51□□□□□ -1.85
SNHG1-214ENST00000540865 PTGFRP43088 359 aa3.51□□□□□ -1.85
SNHG1-214ENST00000540865 GLIPR1P48060 266 aa3.51□□□□□ -1.85
SNHG1-214ENST00000540865 NANOS3P60323 173 aaKnown RBP3.51□□□□□ -1.85
SNHG1-214ENST00000540865 CDC42P60953 191 aa3.51□□□□□ -1.85
SNHG1-214ENST00000540865 PITPNAQ00169 270 aa3.51□□□□□ -1.85
SNHG1-214ENST00000540865 TSPAN31Q12999 210 aa3.51□□□□□ -1.85
SNHG1-214ENST00000540865 MADCAM1Q13477 382 aa3.51□□□□□ -1.85
SNHG1-214ENST00000540865 CRMP1Q14194 572 aa3.51□□□□□ -1.85
SNHG1-214ENST00000540865 LINC01590Q5TEZ4 76 aa3.51□□□□□ -1.85
SNHG1-214ENST00000540865 TMEM42Q69YG0 159 aa3.51□□□□□ -1.85
SNHG1-214ENST00000540865 LGALS9CQ6DKI2 356 aa3.51□□□□□ -1.85
SNHG1-214ENST00000540865 RPL13AP3Q6NVV1 102 aa3.51□□□□□ -1.85
SNHG1-214ENST00000540865 CEMP1Q6PRD7 247 aaPredicted RBP3.51□□□□□ -1.85
SNHG1-214ENST00000540865 LINC00322Q6ZN03 302 aaPredicted RBP3.51□□□□□ -1.85
SNHG1-214ENST00000540865 ASRGL1Q7L266 308 aa3.51□□□□□ -1.85
SNHG1-214ENST00000540865 TRPM8Q7Z2W7 1104 aa3.51□□□□□ -1.85
SNHG1-214ENST00000540865 CATSPERDQ86XM0 798 aa3.51□□□□□ -1.85
SNHG1-214ENST00000540865 ANGPTL5Q86XS5 388 aa3.51□□□□□ -1.85
SNHG1-214ENST00000540865 ANKRD13BQ86YJ7 626 aa3.51□□□□□ -1.85
SNHG1-214ENST00000540865 ERI1Q8IV48 349 aaKnown RBP3.51□□□□□ -1.85
SNHG1-214ENST00000540865 Q8N6K4 173 aa3.51□□□□□ -1.85
SNHG1-214ENST00000540865 Q8N9W7 124 aa3.51□□□□□ -1.85
SNHG1-214ENST00000540865 OR8H1Q8NGG4 311 aa3.51□□□□□ -1.85
SNHG1-214ENST00000540865 OR52L1Q8NGH7 329 aa3.51□□□□□ -1.85
SNHG1-214ENST00000540865 OR4D6Q8NGJ1 314 aa3.51□□□□□ -1.85
SNHG1-214ENST00000540865 OR52J3Q8NH60 311 aa3.51□□□□□ -1.85
SNHG1-214ENST00000540865 HAVCR2Q8TDQ0 301 aa3.51□□□□□ -1.85
SNHG1-214ENST00000540865 GNPDA2Q8TDQ7 276 aa3.51□□□□□ -1.85
SNHG1-214ENST00000540865 C7orf34Q96L11 122 aa3.51□□□□□ -1.85
SNHG1-214ENST00000540865 CEP19Q96LK0 163 aa3.51□□□□□ -1.85
SNHG1-214ENST00000540865 OR5B12Q96R08 314 aa3.51□□□□□ -1.85
SNHG1-214ENST00000540865 RASL11BQ9BPW5 248 aa3.51□□□□□ -1.85
SNHG1-214ENST00000540865 NABP2Q9BQ15 211 aa3.51□□□□□ -1.85
SNHG1-214ENST00000540865 FAM110AQ9BQ89 295 aa3.51□□□□□ -1.85
SNHG1-214ENST00000540865 THAP7Q9BT49 309 aaPredicted RBP3.51□□□□□ -1.85
SNHG1-214ENST00000540865 ELOVL1Q9BW60 279 aa3.51□□□□□ -1.85
SNHG1-214ENST00000540865 CHST6Q9GZX3 395 aa3.51□□□□□ -1.85
SNHG1-214ENST00000540865 RETNQ9HD89 108 aa3.51□□□□□ -1.85
SNHG1-214ENST00000540865 PLSCR3Q9NRY6 295 aa3.51□□□□□ -1.85
SNHG1-214ENST00000540865 KRT84Q9NSB2 600 aa3.51□□□□□ -1.85
SNHG1-214ENST00000540865 GID8Q9NWU2 228 aa3.51□□□□□ -1.85
SNHG1-214ENST00000540865 MTCH1Q9NZJ7 389 aa3.51□□□□□ -1.85
SNHG1-214ENST00000540865 PIGLQ9Y2B2 252 aa3.51□□□□□ -1.85
SNHG1-214ENST00000540865 MRPS28Q9Y2Q9 187 aaKnown RBP3.51□□□□□ -1.85
SNHG1-214ENST00000540865 CEPT1Q9Y6K0 416 aa3.51□□□□□ -1.85
SNHG1-214ENST00000540865 CDH10Q9Y6N8 788 aa3.51□□□□□ -1.85
SNHG1-214ENST00000540865 TNCP24821 2201 aa3.51□□□□□ -1.85
SNHG1-214ENST00000540865 KBTBD11-OT1A0A1B0GTJ5 212 aa3.5□□□□□ -1.85
SNHG1-214ENST00000540865 FAM90A10PA6NDY2 464 aa3.5□□□□□ -1.85
SNHG1-214ENST00000540865 ZNF729A6NN14 1252 aaPredicted RBP3.5□□□□□ -1.85
SNHG1-214ENST00000540865 F8VVB4 439 aa3.5□□□□□ -1.85
SNHG1-214ENST00000540865 F8VWA3 439 aa3.5□□□□□ -1.85
SNHG1-214ENST00000540865 J3QR06 171 aa3.5□□□□□ -1.85
SNHG1-214ENST00000540865 MRASO14807 208 aa3.5□□□□□ -1.85
SNHG1-214ENST00000540865 E2F6O75461 281 aa3.5□□□□□ -1.85
SNHG1-214ENST00000540865 DEDDO75618 318 aa3.5□□□□□ -1.85
SNHG1-214ENST00000540865 DHRS3O75911 302 aa3.5□□□□□ -1.85
SNHG1-214ENST00000540865 GADD45GO95257 159 aa3.5□□□□□ -1.85
SNHG1-214ENST00000540865 BRI3O95415 125 aa3.5□□□□□ -1.85
SNHG1-214ENST00000540865 IGLV3-1P01715 115 aa3.5□□□□□ -1.85
SNHG1-214ENST00000540865 CLUP10909 449 aa3.5□□□□□ -1.85
SNHG1-214ENST00000540865 NFYBP25208 207 aa3.5□□□□□ -1.85
SNHG1-214ENST00000540865 SOX6P35712 828 aa3.5□□□□□ -1.85
SNHG1-214ENST00000540865 OR3A1P47881 315 aa3.5□□□□□ -1.85
SNHG1-214ENST00000540865 RAB9AP51151 201 aa3.5□□□□□ -1.85
SNHG1-214ENST00000540865 SUMO2P61956 95 aaKnown RBP3.5□□□□□ -1.85
SNHG1-214ENST00000540865 ZNF91Q05481 1191 aa3.5□□□□□ -1.85
SNHG1-214ENST00000540865 ZNF816Q0VGE8 651 aaPredicted RBP3.5□□□□□ -1.85
SNHG1-214ENST00000540865 DIAPH2-AS1Q14236 149 aa3.5□□□□□ -1.85
SNHG1-214ENST00000540865 ZNF146Q15072 292 aa3.5□□□□□ -1.85
SNHG1-214ENST00000540865 METTL21CQ5VZV1 264 aa3.5□□□□□ -1.85
SNHG1-214ENST00000540865 FAM53AQ6NSI3 398 aaPredicted RBP3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms