RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 BEST4Q8NFU0 473 aa14.32□□□□□ -0.12
COPS3-212ENST00000539941 WFIKKN1Q96NZ8 548 aa14.32□□□□□ -0.12
COPS3-212ENST00000539941 NRIP2Q9BQI9 281 aa14.32□□□□□ -0.12
COPS3-212ENST00000539941 ZNF442Q9H7R0 627 aa14.32□□□□□ -0.12
COPS3-212ENST00000539941 DCAF16Q9NXF7 216 aa14.32□□□□□ -0.12
COPS3-212ENST00000539941 DUSP13Q9UII6 198 aa14.32□□□□□ -0.12
COPS3-212ENST00000539941 AK3Q9UIJ7 227 aa14.32□□□□□ -0.12
COPS3-212ENST00000539941 SETXQ7Z333 2677 aaKnown RBP14.32□□□□□ -0.12
COPS3-212ENST00000539941 RELNP78509 3460 aa14.31□□□□□ -0.12
COPS3-212ENST00000539941 DPRXA6NFQ7 191 aa14.31□□□□□ -0.12
COPS3-212ENST00000539941 F5H5P2 479 aa14.31□□□□□ -0.12
COPS3-212ENST00000539941 CDIPTO14735 213 aa14.31□□□□□ -0.12
COPS3-212ENST00000539941 ARPC1BO15143 372 aaKnown RBP14.31□□□□□ -0.12
COPS3-212ENST00000539941 PTBP3O95758 552 aaKnown RBP14.31□□□□□ -0.12
COPS3-212ENST00000539941 IFNA6P05013 189 aa14.31□□□□□ -0.12
COPS3-212ENST00000539941 CD200P41217 278 aa14.31□□□□□ -0.12
COPS3-212ENST00000539941 SNU13P55769 128 aaKnown RBP14.31□□□□□ -0.12
COPS3-212ENST00000539941 SORDQ00796 357 aa14.31□□□□□ -0.12
COPS3-212ENST00000539941 AVPI1Q5T686 147 aa14.31□□□□□ -0.12
COPS3-212ENST00000539941 ALKAL2Q6UX46 152 aa14.31□□□□□ -0.12
COPS3-212ENST00000539941 ARRDC1Q8N5I2 433 aa14.31□□□□□ -0.12
COPS3-212ENST00000539941 POC1AQ8NBT0 407 aa14.31□□□□□ -0.12
COPS3-212ENST00000539941 SLC6A7Q99884 636 aa14.31□□□□□ -0.12
COPS3-212ENST00000539941 MSL2Q9HCI7 577 aa14.31□□□□□ -0.12
COPS3-212ENST00000539941 ZNF581Q9P0T4 197 aa14.31□□□□□ -0.12
COPS3-212ENST00000539941 TRAV20A0A0B4J274 112 aa14.3□□□□□ -0.12
COPS3-212ENST00000539941 FAM90A27PA6NNH2 459 aa14.3□□□□□ -0.12
COPS3-212ENST00000539941 RLN2P04090 185 aa14.3□□□□□ -0.12
COPS3-212ENST00000539941 HEXAP06865 529 aa14.3□□□□□ -0.12
COPS3-212ENST00000539941 GRPP07492 148 aa14.3□□□□□ -0.12
COPS3-212ENST00000539941 RPA2P15927 270 aa14.3□□□□□ -0.12
COPS3-212ENST00000539941 BSPH1Q075Z2 132 aa14.3□□□□□ -0.12
COPS3-212ENST00000539941 LRP11Q86VZ4 500 aa14.3□□□□□ -0.12
COPS3-212ENST00000539941 OR5H2Q8NGV7 314 aa14.3□□□□□ -0.12
COPS3-212ENST00000539941 GLYATL2Q8WU03 294 aa14.3□□□□□ -0.12
COPS3-212ENST00000539941 MRPL24Q96A35 216 aaKnown RBP14.3□□□□□ -0.12
COPS3-212ENST00000539941 PHYHIPLQ96FC7 376 aa14.3□□□□□ -0.12
COPS3-212ENST00000539941 ZNF488Q96MN9 340 aa14.3□□□□□ -0.12
COPS3-212ENST00000539941 ST6GALNAC5Q9BVH7 336 aa14.3□□□□□ -0.12
COPS3-212ENST00000539941 ERRFI1Q9UJM3 462 aaPredicted RBP14.3□□□□□ -0.12
COPS3-212ENST00000539941 CADP27708 2225 aa14.3□□□□□ -0.12
COPS3-212ENST00000539941 NBASA2RRP1 2371 aa14.3□□□□□ -0.12
COPS3-212ENST00000539941 UBE2QL1A1L167 161 aa14.3□□□□□ -0.12
COPS3-212ENST00000539941 HPXP02790 462 aa14.3□□□□□ -0.12
COPS3-212ENST00000539941 IGFBP7Q16270 282 aa14.3□□□□□ -0.12
COPS3-212ENST00000539941 SPIN3Q5JUX0 258 aa14.3□□□□□ -0.12
COPS3-212ENST00000539941 VHLLQ6RSH7 139 aa14.3□□□□□ -0.12
COPS3-212ENST00000539941 SLC22A25Q6T423 547 aa14.3□□□□□ -0.12
COPS3-212ENST00000539941 FIP1L1Q6UN15 594 aaKnown RBP14.3□□□□□ -0.12
COPS3-212ENST00000539941 C11orf53Q8IXP5 236 aa14.3□□□□□ -0.12
COPS3-212ENST00000539941 BATF2Q8N1L9 274 aa14.3□□□□□ -0.12
COPS3-212ENST00000539941 GTF3AQ92664 365 aaKnown RBP14.3□□□□□ -0.12
COPS3-212ENST00000539941 HS3ST6Q96QI5 342 aa14.3□□□□□ -0.12
COPS3-212ENST00000539941 SYT3Q9BQG1 590 aa14.3□□□□□ -0.12
COPS3-212ENST00000539941 ARL6Q9H0F7 186 aa14.3□□□□□ -0.12
COPS3-212ENST00000539941 HES4Q9HCC6 221 aa14.3□□□□□ -0.12
COPS3-212ENST00000539941 GSN-AS1Q9NRJ2 163 aa14.3□□□□□ -0.12
COPS3-212ENST00000539941 CA10Q9NS85 328 aa14.3□□□□□ -0.12
COPS3-212ENST00000539941 ZNF701Q9NV72 531 aaPredicted RBP14.3□□□□□ -0.12
COPS3-212ENST00000539941 TAS2R3Q9NYW6 316 aa14.3□□□□□ -0.12
COPS3-212ENST00000539941 FLVCR2Q9UPI3 526 aa14.3□□□□□ -0.12
COPS3-212ENST00000539941 FLNCQ14315 2725 aa14.29□□□□□ -0.12
COPS3-212ENST00000539941 COL12A1Q99715 3063 aa14.29□□□□□ -0.12
COPS3-212ENST00000539941 VSTM5A8MXK1 200 aa14.29□□□□□ -0.12
COPS3-212ENST00000539941 NXPH2O95156 264 aa14.29□□□□□ -0.12
COPS3-212ENST00000539941 FCGR3AP08637 254 aa14.29□□□□□ -0.12
COPS3-212ENST00000539941 FOLR2P14207 255 aa14.29□□□□□ -0.12
COPS3-212ENST00000539941 RAB5BP61020 215 aa14.29□□□□□ -0.12
COPS3-212ENST00000539941 SRSF7Q16629 238 aaKnown RBP eCLIP14.29□□□□□ -0.12
COPS3-212ENST00000539941 GUCA2BQ16661 112 aa14.29□□□□□ -0.12
COPS3-212ENST00000539941 ZNF626Q68DY1 528 aa14.29□□□□□ -0.12
COPS3-212ENST00000539941 STX12Q86Y82 276 aa14.29□□□□□ -0.12
COPS3-212ENST00000539941 OR5AP2Q8NGF4 316 aa14.29□□□□□ -0.12
COPS3-212ENST00000539941 CYYR1Q96J86 154 aa14.29□□□□□ -0.12
COPS3-212ENST00000539941 TSNAXQ99598 290 aaKnown RBP14.29□□□□□ -0.12
COPS3-212ENST00000539941 MRPL37Q9BZE1 423 aaKnown RBP14.29□□□□□ -0.12
COPS3-212ENST00000539941 ALX4Q9H161 411 aaPredicted RBP14.29□□□□□ -0.12
COPS3-212ENST00000539941 RASL12Q9NYN1 266 aa14.29□□□□□ -0.12
COPS3-212ENST00000539941 TAAR3PQ9P1P4 343 aa14.29□□□□□ -0.12
COPS3-212ENST00000539941 IL36RNQ9UBH0 155 aa14.29□□□□□ -0.12
COPS3-212ENST00000539941 ZNF230Q9UIE0 474 aaPredicted RBP14.29□□□□□ -0.12
COPS3-212ENST00000539941 A0A0D9SG52 128 aa14.28□□□□□ -0.12
COPS3-212ENST00000539941 A6NLC8 198 aa14.28□□□□□ -0.12
COPS3-212ENST00000539941 PMP2P02689 132 aa14.28□□□□□ -0.12
COPS3-212ENST00000539941 RBM39Q14498 530 aaKnown RBP14.28□□□□□ -0.12
COPS3-212ENST00000539941 ZNF146Q15072 292 aa14.28□□□□□ -0.12
COPS3-212ENST00000539941 NKPD1Q17RQ9 610 aa14.28□□□□□ -0.12
COPS3-212ENST00000539941 CHRFAM7AQ494W8 412 aa14.28□□□□□ -0.12
COPS3-212ENST00000539941 RNF212Q495C1 297 aa14.28□□□□□ -0.12
COPS3-212ENST00000539941 SCGB2B2Q4G0G5 96 aa14.28□□□□□ -0.12
COPS3-212ENST00000539941 NCMAPQ5T1S8 102 aa14.28□□□□□ -0.12
COPS3-212ENST00000539941 ZNF660Q6AZW8 331 aaPredicted RBP14.28□□□□□ -0.12
COPS3-212ENST00000539941 OR2Z1Q8NG97 314 aa14.28□□□□□ -0.12
COPS3-212ENST00000539941 OR13C8Q8NGS7 320 aa14.28□□□□□ -0.12
COPS3-212ENST00000539941 CA5BP1Q8WTZ4 195 aa14.28□□□□□ -0.12
COPS3-212ENST00000539941 HDHD3Q9BSH5 251 aaPredicted RBP14.28□□□□□ -0.12
COPS3-212ENST00000539941 CHIAQ9BZP6 476 aa14.28□□□□□ -0.12
COPS3-212ENST00000539941 RIMS4Q9H426 269 aaPredicted RBP14.28□□□□□ -0.12
COPS3-212ENST00000539941 MYOZ1Q9NP98 299 aaPredicted RBP14.28□□□□□ -0.12
COPS3-212ENST00000539941 KCNJ16Q9NPI9 418 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms