RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 POLR2GP62487 172 aaKnown RBP eCLIP5.69□□□□□ -1.5
LSAMP-207ENST00000539563 PAFAH1B2P68402 229 aa5.69□□□□□ -1.5
LSAMP-207ENST00000539563 RIGQ13278 110 aa5.69□□□□□ -1.5
LSAMP-207ENST00000539563 RTP5Q14D33 572 aa5.69□□□□□ -1.5
LSAMP-207ENST00000539563 RNF151Q2KHN1 245 aa5.69□□□□□ -1.5
LSAMP-207ENST00000539563 FBXW9Q5XUX1 488 aa5.69□□□□□ -1.5
LSAMP-207ENST00000539563 FAM219AQ8IW50 185 aa5.69□□□□□ -1.5
LSAMP-207ENST00000539563 RBM38Q9H0Z9 239 aaKnown RBP5.69□□□□□ -1.5
LSAMP-207ENST00000539563 NAGKQ9UJ70 344 aa5.69□□□□□ -1.5
LSAMP-207ENST00000539563 GNG7O60262 68 aa5.69□□□□□ -1.5
LSAMP-207ENST00000539563 PATE4P0C8F1 98 aa5.69□□□□□ -1.5
LSAMP-207ENST00000539563 NQO2P16083 231 aa5.69□□□□□ -1.5
LSAMP-207ENST00000539563 PMCHP20382 165 aa5.69□□□□□ -1.5
LSAMP-207ENST00000539563 CSF2RBP32927 897 aa5.69□□□□□ -1.5
LSAMP-207ENST00000539563 TCTEX1D1Q8N7M0 179 aa5.69□□□□□ -1.5
LSAMP-207ENST00000539563 ABHD3Q8WU67 409 aa5.69□□□□□ -1.5
LSAMP-207ENST00000539563 Q9N2K0 584 aa5.69□□□□□ -1.5
LSAMP-207ENST00000539563 NEURL1O76050 574 aa5.69□□□□□ -1.5
LSAMP-207ENST00000539563 NGFRP08138 427 aa5.69□□□□□ -1.5
LSAMP-207ENST00000539563 SCGB1C2P0DMR2 95 aa5.69□□□□□ -1.5
LSAMP-207ENST00000539563 MNX1P50219 401 aaPredicted RBP5.69□□□□□ -1.5
LSAMP-207ENST00000539563 SPNS3Q6ZMD2 512 aa5.69□□□□□ -1.5
LSAMP-207ENST00000539563 SLC35E3Q7Z769 313 aa5.69□□□□□ -1.5
LSAMP-207ENST00000539563 COA4Q9NYJ1 87 aa5.69□□□□□ -1.5
LSAMP-207ENST00000539563 C16orf97H3BN30 126 aa5.69□□□□□ -1.5
LSAMP-207ENST00000539563 CCKARP32238 428 aa5.69□□□□□ -1.5
LSAMP-207ENST00000539563 PLPPR5Q32ZL2 321 aa5.69□□□□□ -1.5
LSAMP-207ENST00000539563 C1orf185Q5T7R7 199 aa5.69□□□□□ -1.5
LSAMP-207ENST00000539563 STXBP6Q8NFX7 210 aa5.69□□□□□ -1.5
LSAMP-207ENST00000539563 OR2I1PQ8NGU4 316 aa5.69□□□□□ -1.5
LSAMP-207ENST00000539563 FLYWCH2Q96CP2 140 aaKnown RBP5.69□□□□□ -1.5
LSAMP-207ENST00000539563 OR2W1Q9Y3N9 320 aa5.69□□□□□ -1.5
LSAMP-207ENST00000539563 IGSF23A1L1A6 192 aa5.69□□□□□ -1.5
LSAMP-207ENST00000539563 IFNL4K9M1U5 179 aa5.69□□□□□ -1.5
LSAMP-207ENST00000539563 FCN1O00602 326 aa5.69□□□□□ -1.5
LSAMP-207ENST00000539563 DEDDO75618 318 aa5.69□□□□□ -1.5
LSAMP-207ENST00000539563 ID4P47928 161 aa5.69□□□□□ -1.5
LSAMP-207ENST00000539563 ASCL1P50553 236 aa5.69□□□□□ -1.5
LSAMP-207ENST00000539563 Q1RN00 199 aa5.69□□□□□ -1.5
LSAMP-207ENST00000539563 CCDC144NLQ6NUI1 221 aa5.69□□□□□ -1.5
LSAMP-207ENST00000539563 PET117Q6UWS5 81 aa5.69□□□□□ -1.5
LSAMP-207ENST00000539563 OR1L8Q8NGR8 309 aa5.69□□□□□ -1.5
LSAMP-207ENST00000539563 TMEM37Q8WXS4 190 aa5.69□□□□□ -1.5
LSAMP-207ENST00000539563 CHST5Q9GZS9 411 aa5.69□□□□□ -1.5
LSAMP-207ENST00000539563 TRBV5-3A0A0A0MS03 114 aa5.69□□□□□ -1.5
LSAMP-207ENST00000539563 ADAM11O75078 769 aa5.69□□□□□ -1.5
LSAMP-207ENST00000539563 EML2O95834 649 aa5.69□□□□□ -1.5
LSAMP-207ENST00000539563 CXorf1O96002 111 aa5.69□□□□□ -1.5
LSAMP-207ENST00000539563 ACAA2P42765 397 aaKnown RBP5.69□□□□□ -1.5
LSAMP-207ENST00000539563 KRTCAP3Q53RY4 240 aa5.69□□□□□ -1.5
LSAMP-207ENST00000539563 SPINK9Q5DT21 86 aa5.69□□□□□ -1.5
LSAMP-207ENST00000539563 FDX2Q6P4F2 183 aa5.69□□□□□ -1.5
LSAMP-207ENST00000539563 RNASEKQ6P5S7 137 aaKnown RBP5.69□□□□□ -1.5
LSAMP-207ENST00000539563 MOGAT3Q86VF5 341 aa5.69□□□□□ -1.5
LSAMP-207ENST00000539563 C5orf17Q8NAS9 161 aa5.69□□□□□ -1.5
LSAMP-207ENST00000539563 FAM210BQ96KR6 192 aa5.69□□□□□ -1.5
LSAMP-207ENST00000539563 LOC285556D6RIA3 1793 aa5.68□□□□□ -1.5
LSAMP-207ENST00000539563 OR4C45A6NMZ5 311 aa5.68□□□□□ -1.5
LSAMP-207ENST00000539563 F5H697 171 aa5.68□□□□□ -1.5
LSAMP-207ENST00000539563 HPXP02790 462 aa5.68□□□□□ -1.5
LSAMP-207ENST00000539563 OR5AL1P0C617 328 aa5.68□□□□□ -1.5
LSAMP-207ENST00000539563 HIST1H1EP10412 219 aaKnown RBP5.68□□□□□ -1.5
LSAMP-207ENST00000539563 PMELP40967 661 aa5.68□□□□□ -1.5
LSAMP-207ENST00000539563 EIF4EBP2Q13542 120 aaPredicted RBP5.68□□□□□ -1.5
LSAMP-207ENST00000539563 ZNF788Q6ZQV5 615 aa5.68□□□□□ -1.5
LSAMP-207ENST00000539563 LILRB1Q8NHL6 650 aaPredicted RBP5.68□□□□□ -1.5
LSAMP-207ENST00000539563 PRR7Q8TB68 274 aa5.68□□□□□ -1.5
LSAMP-207ENST00000539563 RNF133Q8WVZ7 376 aa5.68□□□□□ -1.5
LSAMP-207ENST00000539563 VPS25Q9BRG1 176 aa5.68□□□□□ -1.5
LSAMP-207ENST00000539563 TMEM208Q9BTX3 173 aa5.68□□□□□ -1.5
LSAMP-207ENST00000539563 ANGPTL4Q9BY76 406 aa5.68□□□□□ -1.5
LSAMP-207ENST00000539563 SMOC1Q9H4F8 434 aa5.68□□□□□ -1.5
LSAMP-207ENST00000539563 GSX1Q9H4S2 264 aaPredicted RBP5.68□□□□□ -1.5
LSAMP-207ENST00000539563 SLC7A10Q9NS82 523 aa5.68□□□□□ -1.5
LSAMP-207ENST00000539563 AHRRA9YTQ3 701 aa5.68□□□□□ -1.5
LSAMP-207ENST00000539563 CDS2O95674 445 aa5.68□□□□□ -1.5
LSAMP-207ENST00000539563 PGA4P0DJD7 388 aa5.68□□□□□ -1.5
LSAMP-207ENST00000539563 PGA5P0DJD9 388 aa5.68□□□□□ -1.5
LSAMP-207ENST00000539563 CLEC9AQ6UXN8 241 aa5.68□□□□□ -1.5
LSAMP-207ENST00000539563 DOK5Q9P104 306 aa5.68□□□□□ -1.5
LSAMP-207ENST00000539563 DAOP14920 347 aa5.68□□□□□ -1.5
LSAMP-207ENST00000539563 CLEC18BQ6UXF7 455 aa5.68□□□□□ -1.5
LSAMP-207ENST00000539563 C9orf40Q8IXQ3 194 aa5.68□□□□□ -1.5
LSAMP-207ENST00000539563 STPG2Q8N412 459 aa5.68□□□□□ -1.5
LSAMP-207ENST00000539563 DDA1Q9BW61 102 aa5.68□□□□□ -1.5
LSAMP-207ENST00000539563 CLEC5AQ9NY25 188 aa5.68□□□□□ -1.5
LSAMP-207ENST00000539563 HSPB8Q9UJY1 196 aa5.68□□□□□ -1.5
LSAMP-207ENST00000539563 MMP9P14780 707 aa5.68□□□□□ -1.5
LSAMP-207ENST00000539563 UBE2L3P68036 154 aaKnown RBP5.68□□□□□ -1.5
LSAMP-207ENST00000539563 ZXDAP98168 799 aa5.68□□□□□ -1.5
LSAMP-207ENST00000539563 TGIF2LYQ8IUE0 185 aa5.68□□□□□ -1.5
LSAMP-207ENST00000539563 TGIF2LXQ8IUE1 241 aa5.68□□□□□ -1.5
LSAMP-207ENST00000539563 OR4C5Q8NGB2 326 aa5.68□□□□□ -1.5
LSAMP-207ENST00000539563 OR10G8Q8NGN5 311 aa5.68□□□□□ -1.5
LSAMP-207ENST00000539563 MAP1LC3CQ9BXW4 147 aa5.68□□□□□ -1.5
LSAMP-207ENST00000539563 ASCL3Q9NQ33 180 aa5.68□□□□□ -1.5
LSAMP-207ENST00000539563 ZNF646O15015 1829 aaPredicted RBP5.68□□□□□ -1.5
LSAMP-207ENST00000539563 CDIPTO14735 213 aa5.68□□□□□ -1.5
LSAMP-207ENST00000539563 WISP3O95389 354 aaPredicted RBP5.68□□□□□ -1.5
LSAMP-207ENST00000539563 CRHP06850 196 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms