RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 ARID1AO14497 2285 aa12.49□□□□□ -0.41
CDCA3-207ENST00000538862 TNRC6AQ8NDV7 1962 aaKnown RBP12.49□□□□□ -0.41
CDCA3-207ENST00000538862 PQLC2LA1A4F0 135 aa12.49□□□□□ -0.41
CDCA3-207ENST00000538862 MPPED1O15442 326 aa12.49□□□□□ -0.41
CDCA3-207ENST00000538862 MRPL33O75394 65 aaKnown RBP12.49□□□□□ -0.41
CDCA3-207ENST00000538862 OR7C1O76099 320 aaPredicted RBP12.49□□□□□ -0.41
CDCA3-207ENST00000538862 CDS2O95674 445 aa12.49□□□□□ -0.41
CDCA3-207ENST00000538862 NFYBP25208 207 aa12.49□□□□□ -0.41
CDCA3-207ENST00000538862 SNCAP37840 140 aa12.49□□□□□ -0.41
CDCA3-207ENST00000538862 GNMTQ14749 295 aa12.49□□□□□ -0.41
CDCA3-207ENST00000538862 DAZAP2Q15038 168 aaPredicted RBP12.49□□□□□ -0.41
CDCA3-207ENST00000538862 ZNF843Q8N446 348 aa12.49□□□□□ -0.41
CDCA3-207ENST00000538862 DMBX1Q8NFW5 382 aa12.49□□□□□ -0.41
CDCA3-207ENST00000538862 OR4D5Q8NGN0 318 aa12.49□□□□□ -0.41
CDCA3-207ENST00000538862 BSCL2Q96G97 398 aaPredicted RBP12.49□□□□□ -0.41
CDCA3-207ENST00000538862 REPIN1Q9BWE0 567 aaKnown RBP12.49□□□□□ -0.41
CDCA3-207ENST00000538862 SMCO4Q9NRQ5 59 aa12.49□□□□□ -0.41
CDCA3-207ENST00000538862 CACFD1Q9UGQ2 172 aa12.49□□□□□ -0.41
CDCA3-207ENST00000538862 TINAGQ9UJW2 476 aa12.49□□□□□ -0.41
CDCA3-207ENST00000538862 ZDHHC8Q9ULC8 765 aa12.49□□□□□ -0.41
CDCA3-207ENST00000538862 BOKQ9UMX3 212 aaPredicted RBP12.49□□□□□ -0.41
CDCA3-207ENST00000538862 CNTRLQ7Z7A1 2325 aa12.48□□□□□ -0.41
CDCA3-207ENST00000538862 C3orf85A0A1B0GTC6 90 aa12.48□□□□□ -0.41
CDCA3-207ENST00000538862 C9JQL5 133 aa12.48□□□□□ -0.41
CDCA3-207ENST00000538862 NPBWR2P48146 333 aa12.48□□□□□ -0.41
CDCA3-207ENST00000538862 RND3P61587 244 aa12.48□□□□□ -0.41
CDCA3-207ENST00000538862 AVPI1Q5T686 147 aa12.48□□□□□ -0.41
CDCA3-207ENST00000538862 SLC35G3Q8N808 338 aa12.48□□□□□ -0.41
CDCA3-207ENST00000538862 ZNF565Q8N9K5 539 aa12.48□□□□□ -0.41
CDCA3-207ENST00000538862 TMEM222Q9H0R3 208 aa12.48□□□□□ -0.41
CDCA3-207ENST00000538862 BIN3Q9NQY0 253 aa12.48□□□□□ -0.41
CDCA3-207ENST00000538862 P4HTMQ9NXG6 502 aa12.48□□□□□ -0.41
CDCA3-207ENST00000538862 MEX3AA1L020 520 aaKnown RBP12.47□□□□□ -0.41
CDCA3-207ENST00000538862 PINLYPA6NC86 204 aa12.47□□□□□ -0.41
CDCA3-207ENST00000538862 TRDCB7Z8K6 153 aa12.47□□□□□ -0.41
CDCA3-207ENST00000538862 COX5BP10606 129 aa12.47□□□□□ -0.41
CDCA3-207ENST00000538862 KCNJ3P48549 501 aa12.47□□□□□ -0.41
CDCA3-207ENST00000538862 PDCD1Q15116 288 aa12.47□□□□□ -0.41
CDCA3-207ENST00000538862 MIDNQ504T8 468 aa12.47□□□□□ -0.41
CDCA3-207ENST00000538862 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.47□□□□□ -0.41
CDCA3-207ENST00000538862 DPPA2Q7Z7J5 298 aa12.47□□□□□ -0.41
CDCA3-207ENST00000538862 RXFP4Q8TDU9 374 aa12.47□□□□□ -0.41
CDCA3-207ENST00000538862 PSMF1Q92530 271 aa12.47□□□□□ -0.41
CDCA3-207ENST00000538862 TMEM56Q96MV1 263 aa12.47□□□□□ -0.41
CDCA3-207ENST00000538862 TP53RKQ96S44 253 aa12.47□□□□□ -0.41
CDCA3-207ENST00000538862 RCL1Q9Y2P8 373 aaKnown RBP12.47□□□□□ -0.41
CDCA3-207ENST00000538862 TMEM56-RWDD3S4R434 201 aa12.47□□□□□ -0.41
CDCA3-207ENST00000538862 SPENQ96T58 3664 aaKnown RBP12.47□□□□□ -0.41
CDCA3-207ENST00000538862 ARGFXA6NJG6 315 aa12.47□□□□□ -0.41
CDCA3-207ENST00000538862 CRYBA1P05813 215 aa12.47□□□□□ -0.41
CDCA3-207ENST00000538862 FOLR2P14207 255 aa12.47□□□□□ -0.41
CDCA3-207ENST00000538862 GNRHRP30968 328 aa12.47□□□□□ -0.41
CDCA3-207ENST00000538862 CAMLGP49069 296 aa12.47□□□□□ -0.41
CDCA3-207ENST00000538862 FGF12P61328 243 aa12.47□□□□□ -0.41
CDCA3-207ENST00000538862 ARF1P84077 181 aaKnown RBP12.47□□□□□ -0.41
CDCA3-207ENST00000538862 CLEC9AQ6UXN8 241 aa12.47□□□□□ -0.41
CDCA3-207ENST00000538862 BEND4Q6ZU67 534 aa12.47□□□□□ -0.41
CDCA3-207ENST00000538862 HPSE2Q8WWQ2 592 aa12.47□□□□□ -0.41
CDCA3-207ENST00000538862 ABHD14BQ96IU4 210 aa12.47□□□□□ -0.41
CDCA3-207ENST00000538862 AKR1E2Q96JD6 320 aa12.47□□□□□ -0.41
CDCA3-207ENST00000538862 C12orf57Q99622 126 aa12.47□□□□□ -0.41
CDCA3-207ENST00000538862 SCRT1Q9BWW7 348 aa12.47□□□□□ -0.41
CDCA3-207ENST00000538862 C11orf1Q9H5F2 150 aa12.47□□□□□ -0.41
CDCA3-207ENST00000538862 RNF122Q9H9V4 155 aa12.47□□□□□ -0.41
CDCA3-207ENST00000538862 Q9N2K0 584 aa12.47□□□□□ -0.41
CDCA3-207ENST00000538862 ZNF71Q9NQZ8 489 aaPredicted RBP12.47□□□□□ -0.41
CDCA3-207ENST00000538862 COLCA2A8K830 154 aa12.46□□□□□ -0.42
CDCA3-207ENST00000538862 NAPSAO96009 420 aa12.46□□□□□ -0.42
CDCA3-207ENST00000538862 TK1P04183 234 aa12.46□□□□□ -0.42
CDCA3-207ENST00000538862 GLI4P10075 376 aa12.46□□□□□ -0.42
CDCA3-207ENST00000538862 LMO1P25800 156 aa12.46□□□□□ -0.42
CDCA3-207ENST00000538862 NHLH2Q02577 135 aa12.46□□□□□ -0.42
CDCA3-207ENST00000538862 PRDX4Q13162 271 aa12.46□□□□□ -0.42
CDCA3-207ENST00000538862 GUK1Q16774 197 aa12.46□□□□□ -0.42
CDCA3-207ENST00000538862 C15orf54Q8N8G6 183 aa12.46□□□□□ -0.42
CDCA3-207ENST00000538862 OR56B2PQ8NGI1 322 aa12.46□□□□□ -0.42
CDCA3-207ENST00000538862 SECTM1Q8WVN6 248 aa12.46□□□□□ -0.42
CDCA3-207ENST00000538862 BOD1Q96IK1 185 aa12.46□□□□□ -0.42
CDCA3-207ENST00000538862 SPIN2AQ99865 258 aa12.46□□□□□ -0.42
CDCA3-207ENST00000538862 SPIN2BQ9BPZ2 258 aa12.46□□□□□ -0.42
CDCA3-207ENST00000538862 PAPOLGQ9BWT3 736 aaKnown RBP12.46□□□□□ -0.42
CDCA3-207ENST00000538862 SLC7A10Q9NS82 523 aa12.46□□□□□ -0.42
CDCA3-207ENST00000538862 C19orf12Q9NSK7 152 aa12.46□□□□□ -0.42
CDCA3-207ENST00000538862 LRFN1Q9P244 771 aa12.46□□□□□ -0.42
CDCA3-207ENST00000538862 DUXBA0A1W2PPF3 345 aa12.45□□□□□ -0.42
CDCA3-207ENST00000538862 K7EM74 188 aa12.45□□□□□ -0.42
CDCA3-207ENST00000538862 CTXN2P0C2S0 81 aa12.45□□□□□ -0.42
CDCA3-207ENST00000538862 BCL3P20749 454 aa12.45□□□□□ -0.42
CDCA3-207ENST00000538862 ZNF616Q08AN1 781 aa12.45□□□□□ -0.42
CDCA3-207ENST00000538862 MPV17LQ2QL34 196 aa12.45□□□□□ -0.42
CDCA3-207ENST00000538862 CEACAM21Q3KPI0 293 aa12.45□□□□□ -0.42
CDCA3-207ENST00000538862 MEX3BQ6ZN04 569 aaKnown RBP12.45□□□□□ -0.42
CDCA3-207ENST00000538862 ABHD17AQ96GS6 310 aa12.45□□□□□ -0.42
CDCA3-207ENST00000538862 FAM173AQ9BQD7 235 aa12.45□□□□□ -0.42
CDCA3-207ENST00000538862 EGLN1Q9GZT9 426 aa12.45□□□□□ -0.42
CDCA3-207ENST00000538862 PARP12Q9H0J9 701 aaKnown RBP12.45□□□□□ -0.42
CDCA3-207ENST00000538862 GCN1Q92616 2671 aaKnown RBP12.45□□□□□ -0.42
CDCA3-207ENST00000538862 DOCK10Q96BY6 2186 aa12.45□□□□□ -0.42
CDCA3-207ENST00000538862 NME2P1O60361 137 aa12.45□□□□□ -0.42
CDCA3-207ENST00000538862 IGHV3-9P01782 118 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms