RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 ASB16Q96NS5 453 aa6.1□□□□□ -1.43
SORT1-209ENST00000538502 MFRPQ9BY79 579 aa6.1□□□□□ -1.43
SORT1-209ENST00000538502 PLAC1Q9HBJ0 212 aa6.1□□□□□ -1.43
SORT1-209ENST00000538502 A0A087WWC5 75 aa6.1□□□□□ -1.43
SORT1-209ENST00000538502 A0A096LPE4 126 aa6.1□□□□□ -1.43
SORT1-209ENST00000538502 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.1□□□□□ -1.43
SORT1-209ENST00000538502 IGHV3-20A0A0C4DH32 117 aa6.1□□□□□ -1.43
SORT1-209ENST00000538502 A0A1W2PPZ6 126 aa6.1□□□□□ -1.43
SORT1-209ENST00000538502 IFI6P09912 130 aa6.1□□□□□ -1.43
SORT1-209ENST00000538502 CEACAM3P40198 252 aa6.1□□□□□ -1.43
SORT1-209ENST00000538502 THSD4Q6ZMP0 1018 aa6.1□□□□□ -1.43
SORT1-209ENST00000538502 MOB3BQ86TA1 216 aa6.1□□□□□ -1.43
SORT1-209ENST00000538502 ATG4DQ86TL0 474 aaPredicted RBP6.1□□□□□ -1.43
SORT1-209ENST00000538502 GAPTQ8N292 157 aa6.1□□□□□ -1.43
SORT1-209ENST00000538502 LINC00469Q8N7U9 141 aa6.1□□□□□ -1.43
SORT1-209ENST00000538502 SGMS2Q8NHU3 365 aa6.1□□□□□ -1.43
SORT1-209ENST00000538502 TMEM45BQ96B21 275 aa6.1□□□□□ -1.43
SORT1-209ENST00000538502 RBM14Q96PK6 669 aaKnown RBP6.1□□□□□ -1.43
SORT1-209ENST00000538502 KLK13Q9UKR3 277 aa6.1□□□□□ -1.43
SORT1-209ENST00000538502 IGHV3-9P01782 118 aa6.09□□□□□ -1.43
SORT1-209ENST00000538502 HKR1P10072 659 aa6.09□□□□□ -1.43
SORT1-209ENST00000538502 NPBWR2P48146 333 aa6.09□□□□□ -1.43
SORT1-209ENST00000538502 ZNF260Q3ZCT1 412 aa6.09□□□□□ -1.43
SORT1-209ENST00000538502 FBXO46Q6PJ61 603 aaPredicted RBP6.09□□□□□ -1.43
SORT1-209ENST00000538502 ZNF793Q6ZN11 406 aa6.09□□□□□ -1.43
SORT1-209ENST00000538502 C1orf174Q8IYL3 243 aa6.09□□□□□ -1.43
SORT1-209ENST00000538502 OR1B1Q8NGR6 318 aa6.09□□□□□ -1.43
SORT1-209ENST00000538502 HIST1H2BAQ96A08 127 aa6.09□□□□□ -1.43
SORT1-209ENST00000538502 EID2BQ96D98 161 aa6.09□□□□□ -1.43
SORT1-209ENST00000538502 TUBA4BQ9H853 241 aa6.09□□□□□ -1.43
SORT1-209ENST00000538502 ECM29Q5VYK3 1845 aa6.09□□□□□ -1.43
SORT1-209ENST00000538502 NKX2-6A6NCS4 301 aa6.09□□□□□ -1.43
SORT1-209ENST00000538502 FAM90A10PA6NDY2 464 aa6.09□□□□□ -1.43
SORT1-209ENST00000538502 FAM90A18PA6NE21 464 aa6.09□□□□□ -1.43
SORT1-209ENST00000538502 FAM90A16PA6NEW6 464 aa6.09□□□□□ -1.43
SORT1-209ENST00000538502 FAM90A20PA6NIJ5 464 aa6.09□□□□□ -1.43
SORT1-209ENST00000538502 FAM90A8PA6NJQ4 464 aa6.09□□□□□ -1.43
SORT1-209ENST00000538502 FAM90A7PA6NKC0 464 aa6.09□□□□□ -1.43
SORT1-209ENST00000538502 FAM90A22PA8MWA6 464 aa6.09□□□□□ -1.43
SORT1-209ENST00000538502 FAM90A12PA8MX19 464 aa6.09□□□□□ -1.43
SORT1-209ENST00000538502 FAM90A5PA8MXJ8 464 aa6.09□□□□□ -1.43
SORT1-209ENST00000538502 FAM90A23PA8MXZ1 464 aa6.09□□□□□ -1.43
SORT1-209ENST00000538502 CDC42EP2O14613 210 aa6.09□□□□□ -1.43
SORT1-209ENST00000538502 VENTXO95231 258 aa6.09□□□□□ -1.43
SORT1-209ENST00000538502 CD74P04233 296 aa6.09□□□□□ -1.43
SORT1-209ENST00000538502 FAM90A15PP0C7V4 464 aa6.09□□□□□ -1.43
SORT1-209ENST00000538502 FAM90A13PP0C7W8 464 aa6.09□□□□□ -1.43
SORT1-209ENST00000538502 FAM90A14PP0C7W9 464 aa6.09□□□□□ -1.43
SORT1-209ENST00000538502 FAM90A24PP0C7X0 464 aa6.09□□□□□ -1.43
SORT1-209ENST00000538502 FAM157BP0CG42 384 aa6.09□□□□□ -1.43
SORT1-209ENST00000538502 OR8A1Q8NGG7 326 aa6.09□□□□□ -1.43
SORT1-209ENST00000538502 OR5R1Q8NH85 324 aa6.09□□□□□ -1.43
SORT1-209ENST00000538502 RGP1Q92546 391 aaPredicted RBP6.09□□□□□ -1.43
SORT1-209ENST00000538502 IL36GQ9NZH8 169 aa6.09□□□□□ -1.43
SORT1-209ENST00000538502 SCN7AQ01118 1682 aa6.09□□□□□ -1.43
SORT1-209ENST00000538502 TRA2AQ13595 282 aaKnown RBP eCLIP6.09□□□□□ -1.43
SORT1-209ENST00000538502 MESTQ5EB52 335 aa6.09□□□□□ -1.43
SORT1-209ENST00000538502 SLC35E4Q6ICL7 350 aa6.09□□□□□ -1.43
SORT1-209ENST00000538502 MRPL54Q6P161 138 aaKnown RBP6.09□□□□□ -1.43
SORT1-209ENST00000538502 ASCL5Q7RTU5 278 aa6.09□□□□□ -1.43
SORT1-209ENST00000538502 KISS1RQ969F8 398 aaPredicted RBP6.09□□□□□ -1.43
SORT1-209ENST00000538502 MS4A4AQ96JQ5 239 aa6.09□□□□□ -1.43
SORT1-209ENST00000538502 GABRG3Q99928 467 aa6.09□□□□□ -1.43
SORT1-209ENST00000538502 C19orf24Q9BVV8 132 aa6.09□□□□□ -1.43
SORT1-209ENST00000538502 CHRNA10Q9GZZ6 450 aa6.09□□□□□ -1.43
SORT1-209ENST00000538502 ZFP64Q9NPA5 681 aa6.09□□□□□ -1.43
SORT1-209ENST00000538502 CLN8Q9UBY8 286 aa6.09□□□□□ -1.43
SORT1-209ENST00000538502 SH3BGRL2Q9UJC5 107 aa6.09□□□□□ -1.43
SORT1-209ENST00000538502 SOCS1O15524 211 aa6.09□□□□□ -1.43
SORT1-209ENST00000538502 CD8AP01732 235 aa6.09□□□□□ -1.43
SORT1-209ENST00000538502 SPNS3Q6ZMD2 512 aa6.09□□□□□ -1.43
SORT1-209ENST00000538502 ALG14Q96F25 216 aa6.09□□□□□ -1.43
SORT1-209ENST00000538502 MRPL18Q9H0U6 180 aaKnown RBP6.09□□□□□ -1.43
SORT1-209ENST00000538502 CXCL16Q9H2A7 254 aa6.09□□□□□ -1.43
SORT1-209ENST00000538502 CCL27Q9Y4X3 112 aa6.09□□□□□ -1.43
SORT1-209ENST00000538502 IGHV3-15A0A0B4J1V0 119 aa6.09□□□□□ -1.43
SORT1-209ENST00000538502 TRBV5-5A0A0J9YX44 114 aa6.09□□□□□ -1.43
SORT1-209ENST00000538502 ZNF729A6NN14 1252 aaPredicted RBP6.09□□□□□ -1.43
SORT1-209ENST00000538502 PRRG2O14669 202 aa6.09□□□□□ -1.43
SORT1-209ENST00000538502 GOSR1O95249 250 aa6.09□□□□□ -1.43
SORT1-209ENST00000538502 HLA-DRB1P01911 266 aa6.09□□□□□ -1.43
SORT1-209ENST00000538502 DANCRP0C864 163 aa6.09□□□□□ -1.43
SORT1-209ENST00000538502 GZMHP20718 246 aa6.09□□□□□ -1.43
SORT1-209ENST00000538502 HINT1P49773 126 aaPredicted RBP6.09□□□□□ -1.43
SORT1-209ENST00000538502 MEF2BQ02080 365 aaPredicted RBP6.09□□□□□ -1.43
SORT1-209ENST00000538502 SNRNP40Q96DI7 357 aaKnown RBP6.09□□□□□ -1.43
SORT1-209ENST00000538502 OR2A4O95047 310 aa6.09□□□□□ -1.44
SORT1-209ENST00000538502 RPS11P62280 158 aaKnown RBP eCLIP6.09□□□□□ -1.44
SORT1-209ENST00000538502 DNLZQ5SXM8 178 aa6.09□□□□□ -1.44
SORT1-209ENST00000538502 CST9Q5W186 159 aa6.09□□□□□ -1.44
SORT1-209ENST00000538502 RNF133Q8WVZ7 376 aa6.09□□□□□ -1.44
SORT1-209ENST00000538502 RHOVQ96L33 236 aa6.09□□□□□ -1.44
SORT1-209ENST00000538502 OR2A7Q96R45 310 aa6.09□□□□□ -1.44
SORT1-209ENST00000538502 CHST5Q9GZS9 411 aa6.09□□□□□ -1.44
SORT1-209ENST00000538502 LCN2P80188 198 aa6.08□□□□□ -1.44
SORT1-209ENST00000538502 LIMS2Q7Z4I7 341 aa6.08□□□□□ -1.44
SORT1-209ENST00000538502 LYG1Q8N1E2 194 aa6.08□□□□□ -1.44
SORT1-209ENST00000538502 MRPS16Q9Y3D3 137 aaKnown RBP6.08□□□□□ -1.44
SORT1-209ENST00000538502 A0A1B0GV90 55 aa6.08□□□□□ -1.44
SORT1-209ENST00000538502 F5H697 171 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms