RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 FAAP20Q6NZ36 180 aa12.98□□□□□ -0.33
SFSWAP-206ENST00000537582 CLEC2AQ6UVW9 174 aa12.98□□□□□ -0.33
SFSWAP-206ENST00000537582 ZNF841Q6ZN19 808 aa12.98□□□□□ -0.33
SFSWAP-206ENST00000537582 SLC36A1Q7Z2H8 476 aa12.98□□□□□ -0.33
SFSWAP-206ENST00000537582 MUC20Q8N307 709 aaPredicted RBP12.98□□□□□ -0.33
SFSWAP-206ENST00000537582 OCSTAMPQ9BR26 566 aa12.98□□□□□ -0.33
SFSWAP-206ENST00000537582 DNTTIP1Q9H147 329 aa12.98□□□□□ -0.33
SFSWAP-206ENST00000537582 BEX4Q9NWD9 120 aaPredicted RBP12.98□□□□□ -0.33
SFSWAP-206ENST00000537582 KAAG1Q9UBP8 84 aa12.98□□□□□ -0.33
SFSWAP-206ENST00000537582 PDZD2O15018 2839 aa12.98□□□□□ -0.33
SFSWAP-206ENST00000537582 ARID1AO14497 2285 aa12.98□□□□□ -0.33
SFSWAP-206ENST00000537582 MEIKINA0A087WXM9 373 aa12.98□□□□□ -0.33
SFSWAP-206ENST00000537582 TMEM30CPA0ZSE6 113 aa12.98□□□□□ -0.33
SFSWAP-206ENST00000537582 H3BUI4 141 aa12.98□□□□□ -0.33
SFSWAP-206ENST00000537582 SULT1C2O00338 296 aa12.98□□□□□ -0.33
SFSWAP-206ENST00000537582 MGST3O14880 152 aa12.98□□□□□ -0.33
SFSWAP-206ENST00000537582 RBBP9O75884 186 aa12.98□□□□□ -0.33
SFSWAP-206ENST00000537582 CSN2P05814 226 aa12.98□□□□□ -0.33
SFSWAP-206ENST00000537582 WNT2P09544 360 aa12.98□□□□□ -0.33
SFSWAP-206ENST00000537582 HLA-DMAP28067 261 aa12.98□□□□□ -0.33
SFSWAP-206ENST00000537582 TCF23Q7RTU1 214 aa12.98□□□□□ -0.33
SFSWAP-206ENST00000537582 GAPTQ8N292 157 aa12.98□□□□□ -0.33
SFSWAP-206ENST00000537582 CHAC2Q8WUX2 184 aa12.98□□□□□ -0.33
SFSWAP-206ENST00000537582 MED30Q96HR3 178 aa12.98□□□□□ -0.33
SFSWAP-206ENST00000537582 IFT46Q9NQC8 304 aa12.98□□□□□ -0.33
SFSWAP-206ENST00000537582 ANAPC10Q9UM13 185 aa12.98□□□□□ -0.33
SFSWAP-206ENST00000537582 VPS13CQ709C8 3753 aa12.98□□□□□ -0.33
SFSWAP-206ENST00000537582 ITPR2Q14571 2701 aa12.97□□□□□ -0.33
SFSWAP-206ENST00000537582 VWC2LB2RUY7 222 aa12.97□□□□□ -0.33
SFSWAP-206ENST00000537582 PHF1O43189 567 aaPredicted RBP12.97□□□□□ -0.33
SFSWAP-206ENST00000537582 NDUFB3O43676 98 aa12.97□□□□□ -0.33
SFSWAP-206ENST00000537582 NDUFA2O43678 99 aa12.97□□□□□ -0.33
SFSWAP-206ENST00000537582 P2RX3P56373 397 aa12.97□□□□□ -0.33
SFSWAP-206ENST00000537582 MRPS15P82914 257 aaKnown RBP12.97□□□□□ -0.33
SFSWAP-206ENST00000537582 KLF9Q13886 244 aaPredicted RBP12.97□□□□□ -0.33
SFSWAP-206ENST00000537582 CLEC12BQ2HXU8 276 aa12.97□□□□□ -0.33
SFSWAP-206ENST00000537582 ZNF57Q68EA5 555 aaPredicted RBP12.97□□□□□ -0.33
SFSWAP-206ENST00000537582 SLC35E4Q6ICL7 350 aa12.97□□□□□ -0.33
SFSWAP-206ENST00000537582 GDPD3Q7L5L3 318 aa12.97□□□□□ -0.33
SFSWAP-206ENST00000537582 HOGA1Q86XE5 327 aa12.97□□□□□ -0.33
SFSWAP-206ENST00000537582 OR4D10Q8NGI6 311 aa12.97□□□□□ -0.33
SFSWAP-206ENST00000537582 OR13A1Q8NGR1 328 aa12.97□□□□□ -0.33
SFSWAP-206ENST00000537582 CLDND2Q8NHS1 167 aa12.97□□□□□ -0.33
SFSWAP-206ENST00000537582 PIMREGQ9BSJ6 248 aa12.97□□□□□ -0.33
SFSWAP-206ENST00000537582 FAM234AQ9H0X4 552 aa12.97□□□□□ -0.33
SFSWAP-206ENST00000537582 Q9N2K0 584 aa12.97□□□□□ -0.33
SFSWAP-206ENST00000537582 C19orf12Q9NSK7 152 aa12.97□□□□□ -0.33
SFSWAP-206ENST00000537582 TBC1D24Q9ULP9 559 aa12.97□□□□□ -0.33
SFSWAP-206ENST00000537582 IGHV4-61A0A0C4DH41 118 aa12.96□□□□□ -0.33
SFSWAP-206ENST00000537582 ANKRD20A5PA0PJZ0 165 aa12.96□□□□□ -0.33
SFSWAP-206ENST00000537582 ODAMA1E959 279 aa12.96□□□□□ -0.33
SFSWAP-206ENST00000537582 M0QYG6 137 aa12.96□□□□□ -0.33
SFSWAP-206ENST00000537582 PLA2G10O15496 165 aa12.96□□□□□ -0.33
SFSWAP-206ENST00000537582 CD3DP04234 171 aa12.96□□□□□ -0.33
SFSWAP-206ENST00000537582 DTYMKP23919 212 aa12.96□□□□□ -0.33
SFSWAP-206ENST00000537582 IL2RGP31785 369 aa12.96□□□□□ -0.33
SFSWAP-206ENST00000537582 RCVRNP35243 200 aa12.96□□□□□ -0.33
SFSWAP-206ENST00000537582 LRRC10Q5BKY1 277 aa12.96□□□□□ -0.33
SFSWAP-206ENST00000537582 ZNF880Q6PDB4 577 aa12.96□□□□□ -0.33
SFSWAP-206ENST00000537582 KRTAP1-3Q8IUG1 177 aa12.96□□□□□ -0.33
SFSWAP-206ENST00000537582 SPICQ8N5J4 248 aa12.96□□□□□ -0.33
SFSWAP-206ENST00000537582 BEST4Q8NFU0 473 aa12.96□□□□□ -0.33
SFSWAP-206ENST00000537582 PPP1R35Q8TAP8 253 aa12.96□□□□□ -0.33
SFSWAP-206ENST00000537582 MRGPRDQ8TDS7 321 aa12.96□□□□□ -0.33
SFSWAP-206ENST00000537582 H1FXQ92522 213 aaKnown RBP12.96□□□□□ -0.33
SFSWAP-206ENST00000537582 MBD6Q96DN6 1003 aa12.96□□□□□ -0.33
SFSWAP-206ENST00000537582 NEIL1Q96FI4 390 aaPredicted RBP12.96□□□□□ -0.33
SFSWAP-206ENST00000537582 PATZ1Q9HBE1 687 aaKnown RBP12.96□□□□□ -0.33
SFSWAP-206ENST00000537582 TRAPPC2LQ9UL33 140 aa12.96□□□□□ -0.33
SFSWAP-206ENST00000537582 PCDHB10Q9UN67 800 aa12.96□□□□□ -0.33
SFSWAP-206ENST00000537582 F5H0A9 414 aaPredicted RBP12.95□□□□□ -0.34
SFSWAP-206ENST00000537582 SCTP09683 121 aa12.95□□□□□ -0.34
SFSWAP-206ENST00000537582 GLP1RP43220 463 aa12.95□□□□□ -0.34
SFSWAP-206ENST00000537582 KCNJ3P48549 501 aa12.95□□□□□ -0.34
SFSWAP-206ENST00000537582 FAM53AQ6NSI3 398 aaPredicted RBP12.95□□□□□ -0.34
SFSWAP-206ENST00000537582 OR8B3Q8NGG8 313 aa12.95□□□□□ -0.34
SFSWAP-206ENST00000537582 OR5D13Q8NGL4 314 aa12.95□□□□□ -0.34
SFSWAP-206ENST00000537582 OR8B2Q96RD0 313 aa12.95□□□□□ -0.34
SFSWAP-206ENST00000537582 MIOXQ9UGB7 285 aa12.95□□□□□ -0.34
SFSWAP-206ENST00000537582 MAP1AP78559 2803 aaPredicted RBP12.94□□□□□ -0.34
SFSWAP-206ENST00000537582 TRBV6-6A0A0A6YYG2 114 aa12.94□□□□□ -0.34
SFSWAP-206ENST00000537582 IGHV2-5P01817 119 aa12.94□□□□□ -0.34
SFSWAP-206ENST00000537582 PMP2P02689 132 aa12.94□□□□□ -0.34
SFSWAP-206ENST00000537582 GSTT2P0CG29 244 aa12.94□□□□□ -0.34
SFSWAP-206ENST00000537582 GSTT2BP0CG30 244 aa12.94□□□□□ -0.34
SFSWAP-206ENST00000537582 NAT1P18440 290 aa12.94□□□□□ -0.34
SFSWAP-206ENST00000537582 SSTR5P35346 364 aa12.94□□□□□ -0.34
SFSWAP-206ENST00000537582 CBX5P45973 191 aa12.94□□□□□ -0.34
SFSWAP-206ENST00000537582 ACTBP60709 375 aa12.94□□□□□ -0.34
SFSWAP-206ENST00000537582 LMO4P61968 165 aa12.94□□□□□ -0.34
SFSWAP-206ENST00000537582 ACTG1P63261 375 aa12.94□□□□□ -0.34
SFSWAP-206ENST00000537582 PAX5Q02548 391 aa12.94□□□□□ -0.34
SFSWAP-206ENST00000537582 Q5PR19 223 aa12.94□□□□□ -0.34
SFSWAP-206ENST00000537582 WDR25Q64LD2 544 aaPredicted RBP12.94□□□□□ -0.34
SFSWAP-206ENST00000537582 PRR18Q8N4B5 295 aa12.94□□□□□ -0.34
SFSWAP-206ENST00000537582 TOMM5Q8N4H5 51 aa12.94□□□□□ -0.34
SFSWAP-206ENST00000537582 TINAGL1Q9GZM7 467 aaPredicted RBP12.94□□□□□ -0.34
SFSWAP-206ENST00000537582 MBNL3Q9NUK0 354 aaKnown RBP12.94□□□□□ -0.34
SFSWAP-206ENST00000537582 IGKV1-6A0A0C4DH72 117 aa12.94□□□□□ -0.34
SFSWAP-206ENST00000537582 NDUFS8O00217 210 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms