RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, human

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKDC-208	ENST00000536710	ABCG5	Q9H222	651 aa		2.8	□□□□□ -1.96
PRKDC-208	ENST00000536710	METTL17	Q9H7H0	456 aa	Predicted RBP	2.8	□□□□□ -1.96
PRKDC-208	ENST00000536710	TICRR	Q7Z2Z1	1910 aa		2.8	□□□□□ -1.96
PRKDC-208	ENST00000536710	KIAA1671	Q9BY89	1806 aa		2.79	□□□□□ -1.96
PRKDC-208	ENST00000536710	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	2.79	□□□□□ -1.96
PRKDC-208	ENST00000536710	PIK3R4	Q99570	1358 aa		2.79	□□□□□ -1.96
PRKDC-208	ENST00000536710		A0A1B0GTI1	187 aa		2.79	□□□□□ -1.96
PRKDC-208	ENST00000536710	MKRN2OS	H3BPM6	223 aa		2.79	□□□□□ -1.96
PRKDC-208	ENST00000536710	GPR171	O14626	319 aa		2.79	□□□□□ -1.96
PRKDC-208	ENST00000536710	FGF16	O43320	207 aa		2.79	□□□□□ -1.96
PRKDC-208	ENST00000536710	CYTH3	O43739	400 aa		2.79	□□□□□ -1.96
PRKDC-208	ENST00000536710	SCN2B	O60939	215 aa		2.79	□□□□□ -1.96
PRKDC-208	ENST00000536710	GPR75	O95800	540 aa		2.79	□□□□□ -1.96
PRKDC-208	ENST00000536710	IGLV6-57	P01721	117 aa		2.79	□□□□□ -1.96
PRKDC-208	ENST00000536710	IGHV3-53	P01767	116 aa		2.79	□□□□□ -1.96
PRKDC-208	ENST00000536710	IGKV4-1	P06312	121 aa		2.79	□□□□□ -1.96
PRKDC-208	ENST00000536710	MP68	P56378	58 aa		2.79	□□□□□ -1.96
PRKDC-208	ENST00000536710	IHH	Q14623	411 aa		2.79	□□□□□ -1.96
PRKDC-208	ENST00000536710	ZNHIT3	Q15649	155 aa	Predicted RBP	2.79	□□□□□ -1.96
PRKDC-208	ENST00000536710	AMMECR1L	Q6DCA0	310 aa		2.79	□□□□□ -1.96
PRKDC-208	ENST00000536710	KRTAP5-1	Q6L8H4	278 aa		2.79	□□□□□ -1.96
PRKDC-208	ENST00000536710	FAM19A3	Q7Z5A8	133 aa		2.79	□□□□□ -1.96
PRKDC-208	ENST00000536710	COMTD1	Q86VU5	262 aa		2.79	□□□□□ -1.96
PRKDC-208	ENST00000536710	DYNC2LI1	Q8TCX1	351 aa		2.79	□□□□□ -1.96
PRKDC-208	ENST00000536710	FAM210A	Q96ND0	272 aa		2.79	□□□□□ -1.96
PRKDC-208	ENST00000536710	TSSK6	Q9BXA6	273 aa		2.79	□□□□□ -1.96
PRKDC-208	ENST00000536710	OR51E2	Q9H255	320 aa		2.79	□□□□□ -1.96
PRKDC-208	ENST00000536710	C1orf109	Q9NX04	203 aa		2.79	□□□□□ -1.96
PRKDC-208	ENST00000536710	NAGK	Q9UJ70	344 aa		2.79	□□□□□ -1.96
PRKDC-208	ENST00000536710	SCN4A	P35499	1836 aa		2.79	□□□□□ -1.96
PRKDC-208	ENST00000536710	KIAA0232	Q92628	1395 aa		2.78	□□□□□ -1.96
PRKDC-208	ENST00000536710	GPR179	Q6PRD1	2367 aa		2.78	□□□□□ -1.96
PRKDC-208	ENST00000536710		A0A1W2PNN7	141 aa		2.78	□□□□□ -1.96
PRKDC-208	ENST00000536710	OR5H14	A6NHG9	310 aa		2.78	□□□□□ -1.96
PRKDC-208	ENST00000536710		C9J4A7	227 aa		2.78	□□□□□ -1.96
PRKDC-208	ENST00000536710		D6RAR5	112 aa		2.78	□□□□□ -1.96
PRKDC-208	ENST00000536710	C8orf87	E5RJ46	101 aa		2.78	□□□□□ -1.96
PRKDC-208	ENST00000536710	TOR1A	O14656	332 aa		2.78	□□□□□ -1.96
PRKDC-208	ENST00000536710	PDYN	P01213	254 aa		2.78	□□□□□ -1.96
PRKDC-208	ENST00000536710	GUSB	P08236	651 aa		2.78	□□□□□ -1.96
PRKDC-208	ENST00000536710	SLAMF1	Q13291	335 aa		2.78	□□□□□ -1.96
PRKDC-208	ENST00000536710	TTC33	Q6PID6	262 aa	Predicted RBP	2.78	□□□□□ -1.96
PRKDC-208	ENST00000536710		Q6ZQT7	251 aa		2.78	□□□□□ -1.96
PRKDC-208	ENST00000536710	TCF23	Q7RTU1	214 aa		2.78	□□□□□ -1.96
PRKDC-208	ENST00000536710	FER1L6-AS1	Q8NA97	138 aa		2.78	□□□□□ -1.96
PRKDC-208	ENST00000536710	BPIFB6	Q8NFQ5	453 aa		2.78	□□□□□ -1.96
PRKDC-208	ENST00000536710	OR4A5	Q8NH83	315 aa		2.78	□□□□□ -1.96
PRKDC-208	ENST00000536710	OR5AK3P	Q8NH89	298 aa		2.78	□□□□□ -1.96
PRKDC-208	ENST00000536710	SPPL2B	Q8TCT7	592 aa		2.78	□□□□□ -1.96
PRKDC-208	ENST00000536710	TVP23C	Q96ET8	276 aa		2.78	□□□□□ -1.96
PRKDC-208	ENST00000536710	PYURF	Q96I23	114 aa		2.78	□□□□□ -1.96
PRKDC-208	ENST00000536710	HBEGF	Q99075	208 aa		2.78	□□□□□ -1.96
PRKDC-208	ENST00000536710	PRSS27	Q9BQR3	290 aa		2.78	□□□□□ -1.96
PRKDC-208	ENST00000536710	ZNF251	Q9BRH9	671 aa		2.78	□□□□□ -1.96
PRKDC-208	ENST00000536710	POTEKP	Q9BYX7	375 aa		2.78	□□□□□ -1.96
PRKDC-208	ENST00000536710	SLC19A3	Q9BZV2	496 aa		2.78	□□□□□ -1.96
PRKDC-208	ENST00000536710	KCNIP2	Q9NS61	270 aa		2.78	□□□□□ -1.96
PRKDC-208	ENST00000536710	ZNF391	Q9UJN7	358 aa		2.78	□□□□□ -1.96
PRKDC-208	ENST00000536710	SSH2	Q76I76	1423 aa		2.77	□□□□□ -1.97
PRKDC-208	ENST00000536710	IGKV3D-11	A0A0A0MRZ8	115 aa		2.77	□□□□□ -1.97
PRKDC-208	ENST00000536710		H3BMM0	161 aa		2.77	□□□□□ -1.97
PRKDC-208	ENST00000536710		J3QLI3	93 aa		2.77	□□□□□ -1.97
PRKDC-208	ENST00000536710	CDK14	O94921	469 aa		2.77	□□□□□ -1.97
PRKDC-208	ENST00000536710	PET100	P0DJ07	73 aa		2.77	□□□□□ -1.97
PRKDC-208	ENST00000536710	CGB3	P0DN86	165 aa		2.77	□□□□□ -1.97
PRKDC-208	ENST00000536710	CGB7	P0DN87	165 aa		2.77	□□□□□ -1.97
PRKDC-208	ENST00000536710	FOXA1	P55317	472 aa		2.77	□□□□□ -1.97
PRKDC-208	ENST00000536710	CASP8	Q14790	479 aa		2.77	□□□□□ -1.97
PRKDC-208	ENST00000536710	KRTAP25-1	Q3LHN0	102 aa		2.77	□□□□□ -1.97
PRKDC-208	ENST00000536710	PDPK2P	Q6A1A2	396 aa		2.77	□□□□□ -1.97
PRKDC-208	ENST00000536710	PP632	Q6XCG6	107 aa		2.77	□□□□□ -1.97
PRKDC-208	ENST00000536710	ZNF664	Q8N3J9	261 aa		2.77	□□□□□ -1.97
PRKDC-208	ENST00000536710	C3orf22	Q8N5N4	141 aa		2.77	□□□□□ -1.97
PRKDC-208	ENST00000536710	EIF4E3	Q8N5X7	224 aa	Known RBP	2.77	□□□□□ -1.97
PRKDC-208	ENST00000536710	OR4P4	Q8NGL7	312 aa		2.77	□□□□□ -1.97
PRKDC-208	ENST00000536710	UBE2W	Q96B02	151 aa		2.77	□□□□□ -1.97
PRKDC-208	ENST00000536710	IGF2BP2-AS1	Q96M15	143 aa		2.77	□□□□□ -1.97
PRKDC-208	ENST00000536710	TM2D3	Q9BRN9	247 aa		2.77	□□□□□ -1.97
PRKDC-208	ENST00000536710	BCL2L14	Q9BZR8	327 aa		2.77	□□□□□ -1.97
PRKDC-208	ENST00000536710		U3KQK5	164 aa		2.77	□□□□□ -1.97
PRKDC-208	ENST00000536710	ATRN	O75882	1429 aa		2.76	□□□□□ -1.97
PRKDC-208	ENST00000536710	LOXHD1	Q8IVV2	1947 aa		2.76	□□□□□ -1.97
PRKDC-208	ENST00000536710	PHYH	O14832	338 aa		2.76	□□□□□ -1.97
PRKDC-208	ENST00000536710	LIN7A	O14910	233 aa	Predicted RBP	2.76	□□□□□ -1.97
PRKDC-208	ENST00000536710	SYNGR2	O43760	224 aa		2.76	□□□□□ -1.97
PRKDC-208	ENST00000536710	CALU	O43852	315 aa	Predicted RBP	2.76	□□□□□ -1.97
PRKDC-208	ENST00000536710	UGT2B11	O75310	529 aa		2.76	□□□□□ -1.97
PRKDC-208	ENST00000536710	EPPIN	O95925	133 aa		2.76	□□□□□ -1.97
PRKDC-208	ENST00000536710	GYPC	P04921	128 aa		2.76	□□□□□ -1.97
PRKDC-208	ENST00000536710	ZNF708	P17019	499 aa		2.76	□□□□□ -1.97
PRKDC-208	ENST00000536710	EVI2B	P34910	448 aa		2.76	□□□□□ -1.97
PRKDC-208	ENST00000536710	SULT1A2	P50226	295 aa		2.76	□□□□□ -1.97
PRKDC-208	ENST00000536710	DLX6	P56179	175 aa		2.76	□□□□□ -1.97
PRKDC-208	ENST00000536710	SPIN3	Q5JUX0	258 aa		2.76	□□□□□ -1.97
PRKDC-208	ENST00000536710	CYHR1	Q6ZMK1	362 aa		2.76	□□□□□ -1.97
PRKDC-208	ENST00000536710	LYZL2	Q7Z4W2	148 aa		2.76	□□□□□ -1.97
PRKDC-208	ENST00000536710	SPATA24	Q86W54	205 aa		2.76	□□□□□ -1.97
PRKDC-208	ENST00000536710	MUC15	Q8N387	334 aa		2.76	□□□□□ -1.97
PRKDC-208	ENST00000536710	RPRML	Q8N4K4	120 aa		2.76	□□□□□ -1.97
PRKDC-208	ENST00000536710	OR11L1	Q8NGX0	322 aa		2.76	□□□□□ -1.97

Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms