RNA–Protein interactions for RNA: ENST00000536089.5

MDM2-223, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 1,181 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-223ENST00000536089 CCDC54Q8NEL0 328 aa2.89□□□□□ -1.95
MDM2-223ENST00000536089 ATP6V1C2Q8NEY4 427 aa2.89□□□□□ -1.95
MDM2-223ENST00000536089 CDC26Q8NHZ8 85 aa2.89□□□□□ -1.95
MDM2-223ENST00000536089 LINC01006Q8NI28 216 aa2.89□□□□□ -1.95
MDM2-223ENST00000536089 ZNF563Q8TA94 476 aa2.89□□□□□ -1.95
MDM2-223ENST00000536089 SFXN5Q8TD22 340 aa2.89□□□□□ -1.95
MDM2-223ENST00000536089 GPR119Q8TDV5 335 aa2.89□□□□□ -1.95
MDM2-223ENST00000536089 RDH5Q92781 318 aa2.89□□□□□ -1.95
MDM2-223ENST00000536089 POP5Q969H6 163 aaKnown RBP2.89□□□□□ -1.95
MDM2-223ENST00000536089 TECTBQ96PL2 329 aa2.89□□□□□ -1.95
MDM2-223ENST00000536089 OR8B4Q96RC9 309 aa2.89□□□□□ -1.95
MDM2-223ENST00000536089 SORT1Q99523 831 aa2.89□□□□□ -1.95
MDM2-223ENST00000536089 TMEM59Q9BXS4 323 aa2.89□□□□□ -1.95
MDM2-223ENST00000536089 EBPLQ9BY08 206 aa2.89□□□□□ -1.95
MDM2-223ENST00000536089 CDC42EP4Q9H3Q1 356 aaKnown RBP2.89□□□□□ -1.95
MDM2-223ENST00000536089 ANKRA2Q9H9E1 313 aa2.89□□□□□ -1.95
MDM2-223ENST00000536089 EXD2Q9NVH0 621 aa2.89□□□□□ -1.95
MDM2-223ENST00000536089 SAR1BQ9Y6B6 198 aa2.89□□□□□ -1.95
MDM2-223ENST00000536089 TANC2Q9HCD6 1990 aa2.89□□□□□ -1.95
MDM2-223ENST00000536089 IGHV3-15A0A0B4J1V0 119 aa2.88□□□□□ -1.95
MDM2-223ENST00000536089 IGHV1-18A0A0C4DH31 117 aa2.88□□□□□ -1.95
MDM2-223ENST00000536089 C17orf51A8MQB3 221 aa2.88□□□□□ -1.95
MDM2-223ENST00000536089 A8MT66 165 aa2.88□□□□□ -1.95
MDM2-223ENST00000536089 FAAHO00519 579 aa2.88□□□□□ -1.95
MDM2-223ENST00000536089 GOSR2O14653 212 aa2.88□□□□□ -1.95
MDM2-223ENST00000536089 UPK3AO75631 287 aa2.88□□□□□ -1.95
MDM2-223ENST00000536089 CST1P01037 141 aa2.88□□□□□ -1.95
MDM2-223ENST00000536089 CSTAP01040 98 aa2.88□□□□□ -1.95
MDM2-223ENST00000536089 IGKV1D-16P01601 117 aa2.88□□□□□ -1.95
MDM2-223ENST00000536089 HMGN2P05204 90 aaKnown RBP2.88□□□□□ -1.95
MDM2-223ENST00000536089 TCN1P20061 433 aaPredicted RBP2.88□□□□□ -1.95
MDM2-223ENST00000536089 FUT3P21217 361 aa2.88□□□□□ -1.95
MDM2-223ENST00000536089 GTF2E2P29084 291 aaKnown RBP2.88□□□□□ -1.95
MDM2-223ENST00000536089 MAGEA12P43365 314 aa2.88□□□□□ -1.95
MDM2-223ENST00000536089 POLR2HP52434 150 aaKnown RBP2.88□□□□□ -1.95
MDM2-223ENST00000536089 PLTPP55058 493 aa2.88□□□□□ -1.95
MDM2-223ENST00000536089 DLX1P56177 255 aa2.88□□□□□ -1.95
MDM2-223ENST00000536089 UBA52P62987 128 aaKnown RBP2.88□□□□□ -1.95
MDM2-223ENST00000536089 ZNF141Q15928 474 aa2.88□□□□□ -1.95
MDM2-223ENST00000536089 ZNF79Q15937 498 aa2.88□□□□□ -1.95
MDM2-223ENST00000536089 TRMT5Q32P41 509 aaKnown RBP2.88□□□□□ -1.95
MDM2-223ENST00000536089 ZNF678Q5SXM1 525 aa2.88□□□□□ -1.95
MDM2-223ENST00000536089 NOXRED1Q6NXP6 359 aa2.88□□□□□ -1.95
MDM2-223ENST00000536089 C5orf46Q6UWT4 87 aa2.88□□□□□ -1.95
MDM2-223ENST00000536089 ZNF620Q6ZNG0 422 aa2.88□□□□□ -1.95
MDM2-223ENST00000536089 AAED1Q7RTV5 226 aa2.88□□□□□ -1.95
MDM2-223ENST00000536089 DPPA2Q7Z7J5 298 aa2.88□□□□□ -1.95
MDM2-223ENST00000536089 C11orf53Q8IXP5 236 aa2.88□□□□□ -1.95
MDM2-223ENST00000536089 PNKDQ8N490 385 aa2.88□□□□□ -1.95
MDM2-223ENST00000536089 WDR31Q8NA23 367 aa2.88□□□□□ -1.95
MDM2-223ENST00000536089 ACMSDQ8TDX5 336 aa2.88□□□□□ -1.95
MDM2-223ENST00000536089 ZNF75CPQ92670 426 aaPredicted RBP2.88□□□□□ -1.95
MDM2-223ENST00000536089 ARPC1AQ92747 370 aa2.88□□□□□ -1.95
MDM2-223ENST00000536089 RPUSD4Q96CM3 377 aaKnown RBP2.88□□□□□ -1.95
MDM2-223ENST00000536089 L3HYPDHQ96EM0 354 aa2.88□□□□□ -1.95
MDM2-223ENST00000536089 TMEM101Q96IK0 257 aa2.88□□□□□ -1.95
MDM2-223ENST00000536089 ZIM3Q96PE6 472 aa2.88□□□□□ -1.95
MDM2-223ENST00000536089 TAPBPLQ9BX59 468 aa2.88□□□□□ -1.95
MDM2-223ENST00000536089 LINC00470Q9BZP3 86 aa2.88□□□□□ -1.95
MDM2-223ENST00000536089 RACGAP1Q9H0H5 632 aa2.88□□□□□ -1.95
MDM2-223ENST00000536089 C20orf85Q9H1P6 137 aa2.88□□□□□ -1.95
MDM2-223ENST00000536089 C1orf198Q9H425 327 aa2.88□□□□□ -1.95
MDM2-223ENST00000536089 ARMC7Q9H6L4 198 aa2.88□□□□□ -1.95
MDM2-223ENST00000536089 CACYBPQ9HB71 228 aaKnown RBP2.88□□□□□ -1.95
MDM2-223ENST00000536089 C1orf109Q9NX04 203 aa2.88□□□□□ -1.95
MDM2-223ENST00000536089 SNX24Q9Y343 169 aa2.88□□□□□ -1.95
MDM2-223ENST00000536089 STARD10Q9Y365 291 aa2.88□□□□□ -1.95
MDM2-223ENST00000536089 ANK3Q12955 4377 aaKnown RBP2.88□□□□□ -1.95
MDM2-223ENST00000536089 DSPPQ9NZW4 1301 aa2.88□□□□□ -1.95
MDM2-223ENST00000536089 A0A075B6Q4 140 aa2.87□□□□□ -1.95
MDM2-223ENST00000536089 A0A1W2PPE3 182 aa2.87□□□□□ -1.95
MDM2-223ENST00000536089 FAM231BA6NCW3 169 aa2.87□□□□□ -1.95
MDM2-223ENST00000536089 C12orf71A8MTZ7 269 aa2.87□□□□□ -1.95
MDM2-223ENST00000536089 CLDN25C9JDP6 229 aa2.87□□□□□ -1.95
MDM2-223ENST00000536089 RPL36A-HNRNPH2H7BZ11 118 aa2.87□□□□□ -1.95
MDM2-223ENST00000536089 SCAMP2O15127 329 aaKnown RBP2.87□□□□□ -1.95
MDM2-223ENST00000536089 FOXH1O75593 365 aa2.87□□□□□ -1.95
MDM2-223ENST00000536089 LY6HO94772 140 aa2.87□□□□□ -1.95
MDM2-223ENST00000536089 MPZL1O95297 269 aa2.87□□□□□ -1.95
MDM2-223ENST00000536089 H6PDO95479 791 aa2.87□□□□□ -1.95
MDM2-223ENST00000536089 PTHP01270 115 aa2.87□□□□□ -1.95
MDM2-223ENST00000536089 ALDOBP05062 364 aa2.87□□□□□ -1.95
MDM2-223ENST00000536089 CRYBA1P05813 215 aa2.87□□□□□ -1.95
MDM2-223ENST00000536089 ADRA2AP08913 450 aa2.87□□□□□ -1.95
MDM2-223ENST00000536089 SNRPAP09012 282 aaKnown RBP2.87□□□□□ -1.95
MDM2-223ENST00000536089 CECR9P0C854 216 aa2.87□□□□□ -1.95
MDM2-223ENST00000536089 UBTFL6P0CB48 400 aaPredicted RBP2.87□□□□□ -1.95
MDM2-223ENST00000536089 CBR1P16152 277 aa2.87□□□□□ -1.95
MDM2-223ENST00000536089 PRPS1L1P21108 318 aa2.87□□□□□ -1.95
MDM2-223ENST00000536089 PTNP21246 168 aa2.87□□□□□ -1.95
MDM2-223ENST00000536089 KITLGP21583 273 aa2.87□□□□□ -1.95
MDM2-223ENST00000536089 PRTN3P24158 256 aa2.87□□□□□ -1.95
MDM2-223ENST00000536089 YAP1P46937 504 aaKnown RBP2.87□□□□□ -1.95
MDM2-223ENST00000536089 PRRX1P54821 245 aa2.87□□□□□ -1.95
MDM2-223ENST00000536089 OR2B6P58173 313 aa2.87□□□□□ -1.95
MDM2-223ENST00000536089 COPZ1P61923 177 aa2.87□□□□□ -1.95
MDM2-223ENST00000536089 H3F3AP84243 136 aa2.87□□□□□ -1.95
MDM2-223ENST00000536089 CKAP4Q07065 602 aaKnown RBP2.87□□□□□ -1.95
MDM2-223ENST00000536089 SKP2Q13309 424 aa2.87□□□□□ -1.95
MDM2-223ENST00000536089 XKR7Q5GH72 579 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms