RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 CBLN4Q9NTU7 201 aa10.43□□□□□ -0.74
SCARB1-204ENST00000535005 UQCC1Q9NVA1 299 aa10.43□□□□□ -0.74
SCARB1-204ENST00000535005 A0A0B4J2A0 478 aa10.42□□□□□ -0.74
SCARB1-204ENST00000535005 IGKV1-9A0A0C4DH69 117 aa10.42□□□□□ -0.74
SCARB1-204ENST00000535005 UBE2CO00762 179 aa10.42□□□□□ -0.74
SCARB1-204ENST00000535005 GATCO43716 136 aaKnown RBP10.42□□□□□ -0.74
SCARB1-204ENST00000535005 CRYBA1P05813 215 aa10.42□□□□□ -0.74
SCARB1-204ENST00000535005 PRF1P14222 555 aa10.42□□□□□ -0.74
SCARB1-204ENST00000535005 EFNB2P52799 333 aa10.42□□□□□ -0.74
SCARB1-204ENST00000535005 PDZK1IP1Q13113 114 aa10.42□□□□□ -0.74
SCARB1-204ENST00000535005 CNN3Q15417 329 aaKnown RBP10.42□□□□□ -0.74
SCARB1-204ENST00000535005 CEACAM21Q3KPI0 293 aa10.42□□□□□ -0.74
SCARB1-204ENST00000535005 C11orf71Q6IPW1 123 aa10.42□□□□□ -0.74
SCARB1-204ENST00000535005 TMEM88Q6PEY1 159 aa10.42□□□□□ -0.74
SCARB1-204ENST00000535005 CBLN2Q8IUK8 224 aa10.42□□□□□ -0.74
SCARB1-204ENST00000535005 OR5A2Q8NGI9 324 aa10.42□□□□□ -0.74
SCARB1-204ENST00000535005 OR13C9Q8NGT0 318 aa10.42□□□□□ -0.74
SCARB1-204ENST00000535005 OR5P3Q8WZ94 311 aa10.42□□□□□ -0.74
SCARB1-204ENST00000535005 HIST1H2AAQ96QV6 131 aa10.42□□□□□ -0.74
SCARB1-204ENST00000535005 MS4A5Q9H3V2 200 aa10.42□□□□□ -0.74
SCARB1-204ENST00000535005 GPR173Q9NS66 373 aa10.42□□□□□ -0.74
SCARB1-204ENST00000535005 SHPKQ9UHJ6 478 aa10.42□□□□□ -0.74
SCARB1-204ENST00000535005 ZDHHC8Q9ULC8 765 aa10.42□□□□□ -0.74
SCARB1-204ENST00000535005 RAI1Q7Z5J4 1906 aaPredicted RBP10.42□□□□□ -0.74
SCARB1-204ENST00000535005 C1orf196B1AJZ1 125 aa10.42□□□□□ -0.74
SCARB1-204ENST00000535005 MLNRO43193 412 aa10.42□□□□□ -0.74
SCARB1-204ENST00000535005 DUS4LO95620 317 aaKnown RBP10.42□□□□□ -0.74
SCARB1-204ENST00000535005 ERCC1P07992 297 aaPredicted RBP10.42□□□□□ -0.74
SCARB1-204ENST00000535005 NAT2P11245 290 aa10.42□□□□□ -0.74
SCARB1-204ENST00000535005 LYL1P12980 280 aa10.42□□□□□ -0.74
SCARB1-204ENST00000535005 S100PP25815 95 aa10.42□□□□□ -0.74
SCARB1-204ENST00000535005 PSMB6P28072 239 aa10.42□□□□□ -0.74
SCARB1-204ENST00000535005 ALDH3B1P43353 468 aa10.42□□□□□ -0.74
SCARB1-204ENST00000535005 FUT6P51993 359 aa10.42□□□□□ -0.74
SCARB1-204ENST00000535005 ATP1B3P54709 279 aa10.42□□□□□ -0.74
SCARB1-204ENST00000535005 OR8G1Q15617 311 aa10.42□□□□□ -0.74
SCARB1-204ENST00000535005 C20orf204Q6ZNR8 217 aa10.42□□□□□ -0.74
SCARB1-204ENST00000535005 NKAIN3Q8N8D7 197 aa10.42□□□□□ -0.74
SCARB1-204ENST00000535005 OR13C8Q8NGS7 320 aa10.42□□□□□ -0.74
SCARB1-204ENST00000535005 HPSE2Q8WWQ2 592 aa10.42□□□□□ -0.74
SCARB1-204ENST00000535005 SLC25A28Q96A46 364 aa10.42□□□□□ -0.74
SCARB1-204ENST00000535005 MICU1Q9BPX6 476 aa10.42□□□□□ -0.74
SCARB1-204ENST00000535005 ADAT1Q9BUB4 502 aaKnown RBP10.42□□□□□ -0.74
SCARB1-204ENST00000535005 UBTD1Q9HAC8 227 aa10.42□□□□□ -0.74
SCARB1-204ENST00000535005 MSL2Q9HCI7 577 aa10.42□□□□□ -0.74
SCARB1-204ENST00000535005 RCC2Q9P258 522 aaKnown RBP10.42□□□□□ -0.74
SCARB1-204ENST00000535005 LPAR3Q9UBY5 353 aa10.42□□□□□ -0.74
SCARB1-204ENST00000535005 ZNF230Q9UIE0 474 aaPredicted RBP10.42□□□□□ -0.74
SCARB1-204ENST00000535005 EDARQ9UNE0 448 aa10.42□□□□□ -0.74
SCARB1-204ENST00000535005 SLC7A11Q9UPY5 501 aa10.42□□□□□ -0.74
SCARB1-204ENST00000535005 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.41□□□□□ -0.74
SCARB1-204ENST00000535005 MEX3AA1L020 520 aaKnown RBP10.41□□□□□ -0.74
SCARB1-204ENST00000535005 C9orf170A2RU37 121 aa10.41□□□□□ -0.74
SCARB1-204ENST00000535005 OR5B21A6NL26 309 aa10.41□□□□□ -0.74
SCARB1-204ENST00000535005 C17orf100A8MU93 164 aa10.41□□□□□ -0.74
SCARB1-204ENST00000535005 TAAR5O14804 337 aa10.41□□□□□ -0.74
SCARB1-204ENST00000535005 LDLRAD4O15165 306 aa10.41□□□□□ -0.74
SCARB1-204ENST00000535005 PTBP3O95758 552 aaKnown RBP10.41□□□□□ -0.74
SCARB1-204ENST00000535005 FABP1P07148 127 aa10.41□□□□□ -0.74
SCARB1-204ENST00000535005 CD55P08174 381 aa10.41□□□□□ -0.74
SCARB1-204ENST00000535005 SOD3P08294 240 aa10.41□□□□□ -0.74
SCARB1-204ENST00000535005 HTR2CP28335 458 aa10.41□□□□□ -0.74
SCARB1-204ENST00000535005 PPOXP50336 477 aa10.41□□□□□ -0.74
SCARB1-204ENST00000535005 CAV2P51636 162 aa10.41□□□□□ -0.74
SCARB1-204ENST00000535005 MZT1Q08AG7 82 aa10.41□□□□□ -0.74
SCARB1-204ENST00000535005 PLA2G7Q13093 441 aa10.41□□□□□ -0.74
SCARB1-204ENST00000535005 RNASE10Q5GAN6 216 aaKnown RBP10.41□□□□□ -0.74
SCARB1-204ENST00000535005 FAM76BQ5HYJ3 339 aa10.41□□□□□ -0.74
SCARB1-204ENST00000535005 PLCXD3Q63HM9 321 aa10.41□□□□□ -0.74
SCARB1-204ENST00000535005 LYPD6Q86Y78 171 aa10.41□□□□□ -0.74
SCARB1-204ENST00000535005 OR51A2Q8NGJ7 313 aa10.41□□□□□ -0.74
SCARB1-204ENST00000535005 OR8S1Q8NH09 359 aa10.41□□□□□ -0.74
SCARB1-204ENST00000535005 RXFP4Q8TDU9 374 aa10.41□□□□□ -0.74
SCARB1-204ENST00000535005 NUDCD2Q8WVJ2 157 aa10.41□□□□□ -0.74
SCARB1-204ENST00000535005 IGFBPL1Q8WX77 278 aa10.41□□□□□ -0.74
SCARB1-204ENST00000535005 GTF3AQ92664 365 aaKnown RBP10.41□□□□□ -0.74
SCARB1-204ENST00000535005 NRIP2Q9BQI9 281 aa10.41□□□□□ -0.74
SCARB1-204ENST00000535005 FGF23Q9GZV9 251 aaPredicted RBP10.41□□□□□ -0.74
SCARB1-204ENST00000535005 CXXC4Q9H2H0 198 aa10.41□□□□□ -0.74
SCARB1-204ENST00000535005 TUBA4BQ9H853 241 aa10.41□□□□□ -0.74
SCARB1-204ENST00000535005 TREM1Q9NP99 234 aa10.41□□□□□ -0.74
SCARB1-204ENST00000535005 DNAJB11Q9UBS4 358 aa10.41□□□□□ -0.74
SCARB1-204ENST00000535005 DBX1A6NMT0 343 aa10.4□□□□□ -0.74
SCARB1-204ENST00000535005 H0YL77 283 aa10.4□□□□□ -0.74
SCARB1-204ENST00000535005 EIF3GO75821 320 aaKnown RBP eCLIP10.4□□□□□ -0.74
SCARB1-204ENST00000535005 IGHV1-46P01743 117 aa10.4□□□□□ -0.74
SCARB1-204ENST00000535005 ACAA1P09110 424 aaPredicted RBP10.4□□□□□ -0.74
SCARB1-204ENST00000535005 PET100P0DJ07 73 aa10.4□□□□□ -0.74
SCARB1-204ENST00000535005 CD200P41217 278 aa10.4□□□□□ -0.74
SCARB1-204ENST00000535005 C1orf100Q5SVJ3 147 aa10.4□□□□□ -0.74
SCARB1-204ENST00000535005 TMEM200AQ86VY9 491 aa10.4□□□□□ -0.74
SCARB1-204ENST00000535005 DVL3Q92997 716 aaPredicted RBP10.4□□□□□ -0.74
SCARB1-204ENST00000535005 SMIM8Q96KF7 97 aa10.4□□□□□ -0.74
SCARB1-204ENST00000535005 RTL8AQ9BWD3 113 aa10.4□□□□□ -0.74
SCARB1-204ENST00000535005 TINAGL1Q9GZM7 467 aaPredicted RBP10.4□□□□□ -0.74
SCARB1-204ENST00000535005 TLNRD1Q9H1K6 362 aa10.4□□□□□ -0.74
SCARB1-204ENST00000535005 OR51M1Q9H341 326 aa10.4□□□□□ -0.74
SCARB1-204ENST00000535005 SEBOXQ9HB31 216 aaPredicted RBP10.4□□□□□ -0.74
SCARB1-204ENST00000535005 CHMP1AQ9HD42 196 aaPredicted RBP10.4□□□□□ -0.74
SCARB1-204ENST00000535005 DYNLRB1Q9NP97 96 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms